RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ZMYM4Q5VZL5 1548 aa9.24□□□□□ -0.93
HERC1-213ENST00000561359 SETD1BQ9UPS6 1966 aaKnown RBP9.23□□□□□ -0.93
HERC1-213ENST00000561359 ESF1Q9H501 851 aaKnown RBP9.23□□□□□ -0.93
HERC1-213ENST00000561359 ATP10AO60312 1499 aa9.22□□□□□ -0.93
HERC1-213ENST00000561359 PLEKHD1A6NEE1 506 aa9.22□□□□□ -0.93
HERC1-213ENST00000561359 SPOCK2Q92563 424 aa9.22□□□□□ -0.93
HERC1-213ENST00000561359 MS4A3Q96HJ5 214 aa9.22□□□□□ -0.93
HERC1-213ENST00000561359 NCOA1Q15788 1441 aa9.22□□□□□ -0.93
HERC1-213ENST00000561359 C9orf84Q5VXU9 1444 aa9.22□□□□□ -0.93
HERC1-213ENST00000561359 KIF12Q96FN5 646 aa9.21□□□□□ -0.94
HERC1-213ENST00000561359 HECW1Q76N89 1606 aa9.2□□□□□ -0.94
HERC1-213ENST00000561359 MYT1LQ9UL68 1186 aa9.2□□□□□ -0.94
HERC1-213ENST00000561359 NCKAP5LQ9HCH0 1330 aa9.2□□□□□ -0.94
HERC1-213ENST00000561359 SCAPERQ9BY12 1400 aa9.2□□□□□ -0.94
HERC1-213ENST00000561359 MAP3K13O43283 966 aa9.19□□□□□ -0.94
HERC1-213ENST00000561359 TOM1O60784 492 aa9.19□□□□□ -0.94
HERC1-213ENST00000561359 GSE1Q14687 1217 aa9.19□□□□□ -0.94
HERC1-213ENST00000561359 TRAPPC8Q9Y2L5 1435 aa9.19□□□□□ -0.94
HERC1-213ENST00000561359 CFAP74Q9C0B2 1584 aa9.18□□□□□ -0.94
HERC1-213ENST00000561359 CTTNBP2Q8WZ74 1663 aa9.17□□□□□ -0.94
HERC1-213ENST00000561359 CIZ1Q9ULV3 898 aaPredicted RBP9.17□□□□□ -0.94
HERC1-213ENST00000561359 PCDHB13Q9Y5F0 798 aa9.17□□□□□ -0.94
HERC1-213ENST00000561359 PYGBP11216 843 aa9.16□□□□□ -0.94
HERC1-213ENST00000561359 POTEIP0CG38 1075 aa9.15□□□□□ -0.94
HERC1-213ENST00000561359 PKD2Q13563 968 aa9.15□□□□□ -0.94
HERC1-213ENST00000561359 CAMSAP1Q5T5Y3 1602 aa9.15□□□□□ -0.94
HERC1-213ENST00000561359 NUP153P49790 1475 aaKnown RBP9.15□□□□□ -0.95
HERC1-213ENST00000561359 RAPGEF6Q8TEU7 1601 aa9.14□□□□□ -0.95
HERC1-213ENST00000561359 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.14□□□□□ -0.95
HERC1-213ENST00000561359 EFCAB2Q5VUJ9 269 aa9.13□□□□□ -0.95
HERC1-213ENST00000561359 AFAP1Q8N556 730 aa9.13□□□□□ -0.95
HERC1-213ENST00000561359 C3P01024 1663 aa9.11□□□□□ -0.95
HERC1-213ENST00000561359 RANGAP1P46060 587 aaPredicted RBP9.11□□□□□ -0.95
HERC1-213ENST00000561359 SGIP1Q9BQI5 828 aa9.11□□□□□ -0.95
HERC1-213ENST00000561359 PLCH2O75038 1416 aa9.11□□□□□ -0.95
HERC1-213ENST00000561359 RGS17Q9UGC6 210 aaPredicted RBP9.1□□□□□ -0.95
HERC1-213ENST00000561359 CNTLNQ9NXG0 1405 aa9.1□□□□□ -0.95
HERC1-213ENST00000561359 ZNF518AQ6AHZ1 1483 aa9.09□□□□□ -0.95
HERC1-213ENST00000561359 IFNL1Q8IU54 200 aa9.09□□□□□ -0.95
HERC1-213ENST00000561359 NPATQ14207 1427 aa9.08□□□□□ -0.96
HERC1-213ENST00000561359 TRPC6Q9Y210 931 aa9.08□□□□□ -0.96
HERC1-213ENST00000561359 PLA2R1Q13018 1463 aa9.08□□□□□ -0.96
HERC1-213ENST00000561359 PRXQ9BXM0 1461 aa9.08□□□□□ -0.96
HERC1-213ENST00000561359 SRCAPQ6ZRS2 3230 aa9.07□□□□□ -0.96
HERC1-213ENST00000561359 PTPRKQ15262 1439 aa9.07□□□□□ -0.96
HERC1-213ENST00000561359 ATMINO43313 823 aaPredicted RBP9.07□□□□□ -0.96
HERC1-213ENST00000561359 ASTLQ6HA08 431 aaPredicted RBP9.07□□□□□ -0.96
HERC1-213ENST00000561359 TIE1P35590 1138 aa9.06□□□□□ -0.96
HERC1-213ENST00000561359 BMP2KQ9NSY1 1161 aaPredicted RBP9.06□□□□□ -0.96
HERC1-213ENST00000561359 ZMYM3Q14202 1370 aa9.06□□□□□ -0.96
HERC1-213ENST00000561359 TCOF1Q13428 1488 aaKnown RBP9.06□□□□□ -0.96
HERC1-213ENST00000561359 AGLP35573 1532 aa9.05□□□□□ -0.96
HERC1-213ENST00000561359 DIP2CQ9Y2E4 1556 aa9.05□□□□□ -0.96
HERC1-213ENST00000561359 POTEAQ6S8J7 498 aa9.05□□□□□ -0.96
HERC1-213ENST00000561359 PCDHB8Q9UN66 801 aa9.05□□□□□ -0.96
HERC1-213ENST00000561359 CPS1P31327 1500 aa9.05□□□□□ -0.96
HERC1-213ENST00000561359 SAMD9Q5K651 1589 aa9.04□□□□□ -0.96
HERC1-213ENST00000561359 ATN1P54259 1190 aaPredicted RBP9.04□□□□□ -0.96
HERC1-213ENST00000561359 REREQ9P2R6 1566 aa9.03□□□□□ -0.96
HERC1-213ENST00000561359 SHANK2Q9UPX8 1470 aa9.03□□□□□ -0.96
HERC1-213ENST00000561359 CHRM1P11229 460 aaPredicted RBP9.03□□□□□ -0.96
HERC1-213ENST00000561359 ZNF467Q7Z7K2 595 aaPredicted RBP9.03□□□□□ -0.96
HERC1-213ENST00000561359 PELP1Q8IZL8 1130 aaKnown RBP9.03□□□□□ -0.96
HERC1-213ENST00000561359 ATP1B4Q9UN42 357 aaPredicted RBP9.03□□□□□ -0.96
HERC1-213ENST00000561359 KDM5CP41229 1560 aa9.03□□□□□ -0.96
HERC1-213ENST00000561359 TTLL13PA6NNM8 815 aa9.02□□□□□ -0.97
HERC1-213ENST00000561359 LHX8Q68G74 356 aa9.02□□□□□ -0.97
HERC1-213ENST00000561359 TMEM106CQ9BVX2 250 aa9.02□□□□□ -0.97
HERC1-213ENST00000561359 MLH3Q9UHC1 1453 aa9.02□□□□□ -0.97
HERC1-213ENST00000561359 ARHGAP5Q13017 1502 aa9.01□□□□□ -0.97
HERC1-213ENST00000561359 SLC39A7Q92504 469 aa9.01□□□□□ -0.97
HERC1-213ENST00000561359 ABCA6Q8N139 1617 aa9.01□□□□□ -0.97
HERC1-213ENST00000561359 CDK13Q14004 1512 aaKnown RBP9□□□□□ -0.97
HERC1-213ENST00000561359 CEP170BQ9Y4F5 1589 aaPredicted RBP9□□□□□ -0.97
HERC1-213ENST00000561359 METRNQ9UJH8 293 aa9□□□□□ -0.97
HERC1-213ENST00000561359 CDK11AQ9UQ88 783 aaPredicted RBP9□□□□□ -0.97
HERC1-213ENST00000561359 C7P10643 843 aa8.99□□□□□ -0.97
HERC1-213ENST00000561359 MYO3AQ8NEV4 1616 aa8.98□□□□□ -0.97
HERC1-213ENST00000561359 ANKLE2Q86XL3 938 aa8.98□□□□□ -0.97
HERC1-213ENST00000561359 TRIM35Q9UPQ4 493 aa8.98□□□□□ -0.97
HERC1-213ENST00000561359 ALKQ9UM73 1620 aa8.98□□□□□ -0.97
HERC1-213ENST00000561359 SUPT6HQ7KZ85 1726 aaKnown RBP8.97□□□□□ -0.97
HERC1-213ENST00000561359 GGT6Q6P531 493 aa8.97□□□□□ -0.97
HERC1-213ENST00000561359 ZNF142P52746 1687 aaPredicted RBP8.97□□□□□ -0.97
HERC1-213ENST00000561359 MYO5CQ9NQX4 1742 aa8.97□□□□□ -0.97
HERC1-213ENST00000561359 A2ML1A8K2U0 1454 aa8.96□□□□□ -0.97
HERC1-213ENST00000561359 UPF1Q92900 1129 aaKnown RBP eCLIP8.96□□□□□ -0.98
HERC1-213ENST00000561359 MROH2AA6NES4 1674 aa8.96□□□□□ -0.98
HERC1-213ENST00000561359 SEC24BO95487 1268 aa8.95□□□□□ -0.98
HERC1-213ENST00000561359 PSEN1P49768 467 aa8.94□□□□□ -0.98
HERC1-213ENST00000561359 GOLGA2Q08379 1002 aa8.93□□□□□ -0.98
HERC1-213ENST00000561359 SPAG9O60271 1321 aaKnown RBP8.93□□□□□ -0.98
HERC1-213ENST00000561359 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.93□□□□□ -0.98
HERC1-213ENST00000561359 CLIP1P30622 1438 aa8.93□□□□□ -0.98
HERC1-213ENST00000561359 VWDEQ8N2E2 1590 aa8.93□□□□□ -0.98
HERC1-213ENST00000561359 DNMT1P26358 1616 aaKnown RBP8.93□□□□□ -0.98
HERC1-213ENST00000561359 SETD1AO15047 1707 aaKnown RBP8.92□□□□□ -0.98
HERC1-213ENST00000561359 KIF14Q15058 1648 aa8.92□□□□□ -0.98
HERC1-213ENST00000561359 NEURL4Q96JN8 1562 aa8.92□□□□□ -0.98
HERC1-213ENST00000561359 NPHP4O75161 1426 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms