RNA–Protein interactions for RNA: ENST00000560964.1

WHAMM-202, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules, humanhuman

TSL 2

Gene WHAMM, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMM-202ENST00000560964 PTPN5P54829 565 aa12.37□□□□□ -0.43
WHAMM-202ENST00000560964 WNT2BQ93097 391 aa12.37□□□□□ -0.43
WHAMM-202ENST00000560964 THSD4Q6ZMP0 1018 aa12.36□□□□□ -0.43
WHAMM-202ENST00000560964 RABGEF1Q9UJ41 708 aa12.36□□□□□ -0.43
WHAMM-202ENST00000560964 COL9A1P20849 921 aa12.33□□□□□ -0.44
WHAMM-202ENST00000560964 ONECUT3O60422 494 aaPredicted RBP12.31□□□□□ -0.44
WHAMM-202ENST00000560964 PROX2Q3B8N5 592 aa12.31□□□□□ -0.44
WHAMM-202ENST00000560964 C6orf132Q5T0Z8 1188 aa12.31□□□□□ -0.44
WHAMM-202ENST00000560964 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
WHAMM-202ENST00000560964 SPDYE16A6NNV3 312 aaPredicted RBP12.29□□□□□ -0.44
WHAMM-202ENST00000560964 LAPTM4BQ86VI4 370 aa12.29□□□□□ -0.44
WHAMM-202ENST00000560964 PAXIP1Q6ZW49 1069 aaPredicted RBP12.28□□□□□ -0.44
WHAMM-202ENST00000560964 ANKK1Q8NFD2 765 aa12.28□□□□□ -0.44
WHAMM-202ENST00000560964 DDX12PQ92771 950 aa12.28□□□□□ -0.44
WHAMM-202ENST00000560964 CFAP44Q96MT7 982 aa12.28□□□□□ -0.44
WHAMM-202ENST00000560964 PDIA6Q15084 440 aa12.27□□□□□ -0.45
WHAMM-202ENST00000560964 WDR70Q9NW82 654 aa12.27□□□□□ -0.45
WHAMM-202ENST00000560964 E2F4Q16254 413 aa12.26□□□□□ -0.45
WHAMM-202ENST00000560964 KIAA1468Q9P260 1216 aa12.26□□□□□ -0.45
WHAMM-202ENST00000560964 IFFO2Q5TF58 517 aa12.25□□□□□ -0.45
WHAMM-202ENST00000560964 RBM33Q96EV2 1170 aaKnown RBP12.25□□□□□ -0.45
WHAMM-202ENST00000560964 NBR1Q14596 966 aa12.23□□□□□ -0.45
WHAMM-202ENST00000560964 TRIM6-TRIM34B2RNG4 842 aa12.22□□□□□ -0.45
WHAMM-202ENST00000560964 EN1Q05925 392 aaPredicted RBP12.22□□□□□ -0.45
WHAMM-202ENST00000560964 ARIH1Q9Y4X5 557 aaPredicted RBP12.22□□□□□ -0.45
WHAMM-202ENST00000560964 MAP3K7O43318 606 aa12.2□□□□□ -0.46
WHAMM-202ENST00000560964 SOWAHBA6NEL2 793 aa12.19□□□□□ -0.46
WHAMM-202ENST00000560964 ZFRQ96KR1 1074 aaKnown RBP12.19□□□□□ -0.46
WHAMM-202ENST00000560964 NYAP1Q6ZVC0 841 aa12.18□□□□□ -0.46
WHAMM-202ENST00000560964 RGS20O76081 388 aa12.17□□□□□ -0.46
WHAMM-202ENST00000560964 FAM98CQ17RN3 349 aaKnown RBP12.17□□□□□ -0.46
WHAMM-202ENST00000560964 BCAMP50895 628 aa12.16□□□□□ -0.46
WHAMM-202ENST00000560964 PACS2Q86VP3 889 aa12.16□□□□□ -0.46
WHAMM-202ENST00000560964 SEPT9Q9UHD8 586 aaPredicted RBP12.16□□□□□ -0.46
WHAMM-202ENST00000560964 CERKQ8TCT0 537 aa12.15□□□□□ -0.46
WHAMM-202ENST00000560964 TSR1Q2NL82 804 aaKnown RBP12.14□□□□□ -0.47
WHAMM-202ENST00000560964 A0A0G2JS52 829 aa12.11□□□□□ -0.47
WHAMM-202ENST00000560964 GRXCR2A6NFK2 248 aa12.11□□□□□ -0.47
WHAMM-202ENST00000560964 ITGBL1O95965 494 aaPredicted RBP12.1□□□□□ -0.47
WHAMM-202ENST00000560964 LRCH3Q96II8 777 aa12.1□□□□□ -0.47
WHAMM-202ENST00000560964 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.1□□□□□ -0.47
WHAMM-202ENST00000560964 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
WHAMM-202ENST00000560964 PRSS12P56730 875 aa12.09□□□□□ -0.47
WHAMM-202ENST00000560964 CDCA7LQ96GN5 454 aa12.09□□□□□ -0.47
WHAMM-202ENST00000560964 WBP1LQ9NX94 342 aa12.08□□□□□ -0.48
WHAMM-202ENST00000560964 TSR3Q9UJK0 312 aaKnown RBP12.08□□□□□ -0.48
WHAMM-202ENST00000560964 HPS5Q9UPZ3 1129 aa12.05□□□□□ -0.48
WHAMM-202ENST00000560964 OSBPP22059 807 aa12.04□□□□□ -0.48
WHAMM-202ENST00000560964 NBPF26B4DH59 902 aa12.03□□□□□ -0.48
WHAMM-202ENST00000560964 PRIM1P49642 420 aaKnown RBP12.03□□□□□ -0.48
WHAMM-202ENST00000560964 RBM27Q9P2N5 1060 aaKnown RBP12.02□□□□□ -0.49
WHAMM-202ENST00000560964 KCNC4Q03721 635 aa12.01□□□□□ -0.49
WHAMM-202ENST00000560964 PPP4CP60510 307 aa12□□□□□ -0.49
WHAMM-202ENST00000560964 TATDN2Q93075 761 aa12□□□□□ -0.49
WHAMM-202ENST00000560964 PNMA3Q9UL41 463 aa11.99□□□□□ -0.49
WHAMM-202ENST00000560964 SMAPO00193 183 aa11.98□□□□□ -0.49
WHAMM-202ENST00000560964 FAM198AQ9UFP1 575 aa11.98□□□□□ -0.49
WHAMM-202ENST00000560964 HDGFP51858 240 aaKnown RBP11.97□□□□□ -0.49
WHAMM-202ENST00000560964 SAMD7Q7Z3H4 446 aa11.97□□□□□ -0.49
WHAMM-202ENST00000560964 ARHGEF1Q92888 912 aaKnown RBP11.97□□□□□ -0.49
WHAMM-202ENST00000560964 CDHR5Q9HBB8 845 aa11.97□□□□□ -0.49
WHAMM-202ENST00000560964 TSHZ2Q9NRE2 1034 aa11.96□□□□□ -0.49
WHAMM-202ENST00000560964 NUDT18Q6ZVK8 323 aa11.94□□□□□ -0.5
WHAMM-202ENST00000560964 IRX2Q9BZI1 471 aaPredicted RBP11.94□□□□□ -0.5
WHAMM-202ENST00000560964 C3orf80F5H4A9 247 aa11.9□□□□□ -0.5
WHAMM-202ENST00000560964 TTC13Q8NBP0 860 aa11.9□□□□□ -0.5
WHAMM-202ENST00000560964 NECTIN2Q92692 538 aa11.9□□□□□ -0.5
WHAMM-202ENST00000560964 NPDC1Q9NQX5 325 aaPredicted RBP11.9□□□□□ -0.5
WHAMM-202ENST00000560964 PADI6Q6TGC4 694 aa11.88□□□□□ -0.51
WHAMM-202ENST00000560964 KCNV2Q8TDN2 545 aa11.87□□□□□ -0.51
WHAMM-202ENST00000560964 RNF40O75150 1001 aa11.86□□□□□ -0.51
WHAMM-202ENST00000560964 SLC4A3P48751 1232 aa11.86□□□□□ -0.51
WHAMM-202ENST00000560964 TJAP1Q5JTD0 557 aa11.85□□□□□ -0.51
WHAMM-202ENST00000560964 MLLT3P42568 568 aaPredicted RBP11.84□□□□□ -0.51
WHAMM-202ENST00000560964 P3H3Q8IVL6 736 aa11.84□□□□□ -0.51
WHAMM-202ENST00000560964 SLF2Q8IX21 1173 aa11.84□□□□□ -0.51
WHAMM-202ENST00000560964 IL21Q9HBE4 155 aa11.84□□□□□ -0.51
WHAMM-202ENST00000560964 MTRQ99707 1265 aa11.82□□□□□ -0.52
WHAMM-202ENST00000560964 SWT1Q5T5J6 900 aaKnown RBP11.81□□□□□ -0.52
WHAMM-202ENST00000560964 EYA1Q99502 592 aa11.8□□□□□ -0.52
WHAMM-202ENST00000560964 PTGDRQ13258 359 aa11.79□□□□□ -0.52
WHAMM-202ENST00000560964 APLP1P51693 650 aa11.78□□□□□ -0.52
WHAMM-202ENST00000560964 PRR14Q9BWN1 585 aa11.77□□□□□ -0.53
WHAMM-202ENST00000560964 NUTM2FA1L443 756 aa11.75□□□□□ -0.53
WHAMM-202ENST00000560964 RBM46Q8TBY0 533 aaKnown RBP11.75□□□□□ -0.53
WHAMM-202ENST00000560964 DNAJB2P25686 324 aa11.73□□□□□ -0.53
WHAMM-202ENST00000560964 LAPTM4AQ15012 233 aa11.72□□□□□ -0.53
WHAMM-202ENST00000560964 PPP1R18Q6NYC8 613 aa11.72□□□□□ -0.53
WHAMM-202ENST00000560964 ZNF516Q92618 1163 aa11.72□□□□□ -0.53
WHAMM-202ENST00000560964 FCHSD2O94868 740 aa11.7□□□□□ -0.54
WHAMM-202ENST00000560964 GGCXP38435 758 aa11.7□□□□□ -0.54
WHAMM-202ENST00000560964 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.7□□□□□ -0.54
WHAMM-202ENST00000560964 ADGRG1Q9Y653 693 aa11.7□□□□□ -0.54
WHAMM-202ENST00000560964 SEMA3EO15041 775 aa11.68□□□□□ -0.54
WHAMM-202ENST00000560964 COPS2P61201 443 aa11.68□□□□□ -0.54
WHAMM-202ENST00000560964 Q6ZNB5 142 aa11.68□□□□□ -0.54
WHAMM-202ENST00000560964 PRKD2Q9BZL6 878 aa11.68□□□□□ -0.54
WHAMM-202ENST00000560964 TMEM134Q9H6X4 195 aa11.68□□□□□ -0.54
WHAMM-202ENST00000560964 V9GY48 417 aaPredicted RBP11.68□□□□□ -0.54
WHAMM-202ENST00000560964 PLCB2Q00722 1185 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms