RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 KCNH8Q96L42 1107 aa11.5□□□□□ -0.57
HMG20A-211ENST00000560867 ADAM33Q9BZ11 813 aa11.5□□□□□ -0.57
HMG20A-211ENST00000560867 MINK1Q8N4C8 1332 aaPredicted RBP11.5□□□□□ -0.57
HMG20A-211ENST00000560867 RBM33Q96EV2 1170 aaKnown RBP11.49□□□□□ -0.57
HMG20A-211ENST00000560867 PTPREP23469 700 aa11.48□□□□□ -0.57
HMG20A-211ENST00000560867 AK7Q96M32 723 aa11.48□□□□□ -0.57
HMG20A-211ENST00000560867 NPDC1Q9NQX5 325 aaPredicted RBP11.48□□□□□ -0.57
HMG20A-211ENST00000560867 ERBB3P21860 1342 aa11.47□□□□□ -0.57
HMG20A-211ENST00000560867 TSR1Q2NL82 804 aaKnown RBP11.47□□□□□ -0.57
HMG20A-211ENST00000560867 PPP1R3GB7ZBB8 358 aa11.46□□□□□ -0.57
HMG20A-211ENST00000560867 PBX2P40425 430 aa11.46□□□□□ -0.57
HMG20A-211ENST00000560867 EMP3P54852 163 aa11.46□□□□□ -0.57
HMG20A-211ENST00000560867 KRI1Q8N9T8 703 aaKnown RBP11.46□□□□□ -0.57
HMG20A-211ENST00000560867 CDHR5Q9HBB8 845 aa11.46□□□□□ -0.57
HMG20A-211ENST00000560867 SLC24A3Q9HC58 644 aa11.44□□□□□ -0.58
HMG20A-211ENST00000560867 ONECUT3O60422 494 aaPredicted RBP11.42□□□□□ -0.58
HMG20A-211ENST00000560867 IRF6O14896 467 aa11.41□□□□□ -0.58
HMG20A-211ENST00000560867 VARS2Q5ST30 1063 aaKnown RBP11.41□□□□□ -0.58
HMG20A-211ENST00000560867 TTC13Q8NBP0 860 aa11.41□□□□□ -0.58
HMG20A-211ENST00000560867 FAM163AQ96GL9 167 aaPredicted RBP11.41□□□□□ -0.58
HMG20A-211ENST00000560867 PRSS12P56730 875 aa11.4□□□□□ -0.58
HMG20A-211ENST00000560867 ZNF687Q8N1G0 1237 aa11.39□□□□□ -0.59
HMG20A-211ENST00000560867 ARHGAP33O14559 1287 aa11.38□□□□□ -0.59
HMG20A-211ENST00000560867 CCDC102AQ96A19 550 aa11.38□□□□□ -0.59
HMG20A-211ENST00000560867 SLC4A5Q9BY07 1137 aa11.38□□□□□ -0.59
HMG20A-211ENST00000560867 OATP04181 439 aa11.37□□□□□ -0.59
HMG20A-211ENST00000560867 CDCA7LQ96GN5 454 aa11.37□□□□□ -0.59
HMG20A-211ENST00000560867 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
HMG20A-211ENST00000560867 KCNK17Q96T54 332 aa11.36□□□□□ -0.59
HMG20A-211ENST00000560867 TRIM66O15016 1216 aa11.35□□□□□ -0.59
HMG20A-211ENST00000560867 AMHR2Q16671 573 aa11.35□□□□□ -0.59
HMG20A-211ENST00000560867 PADI6Q6TGC4 694 aa11.35□□□□□ -0.59
HMG20A-211ENST00000560867 DAXXQ9UER7 740 aaPredicted RBP11.35□□□□□ -0.59
HMG20A-211ENST00000560867 FAM205CA6NFA0 338 aa11.34□□□□□ -0.59
HMG20A-211ENST00000560867 COL9A1P20849 921 aa11.34□□□□□ -0.59
HMG20A-211ENST00000560867 FECHP22830 423 aa11.34□□□□□ -0.59
HMG20A-211ENST00000560867 LCE2DQ5TA82 110 aaPredicted RBP11.34□□□□□ -0.59
HMG20A-211ENST00000560867 TRIM6-TRIM34B2RNG4 842 aa11.33□□□□□ -0.6
HMG20A-211ENST00000560867 HS3ST6Q96QI5 342 aa11.33□□□□□ -0.6
HMG20A-211ENST00000560867 NBPF26B4DH59 902 aa11.32□□□□□ -0.6
HMG20A-211ENST00000560867 ADGRG1Q9Y653 693 aa11.32□□□□□ -0.6
HMG20A-211ENST00000560867 PACS2Q86VP3 889 aa11.31□□□□□ -0.6
HMG20A-211ENST00000560867 RBM46Q8TBY0 533 aaKnown RBP11.31□□□□□ -0.6
HMG20A-211ENST00000560867 ZBED2Q9BTP6 218 aa11.31□□□□□ -0.6
HMG20A-211ENST00000560867 TK2O00142 265 aa11.29□□□□□ -0.6
HMG20A-211ENST00000560867 BRPF1P55201 1214 aaPredicted RBP11.29□□□□□ -0.6
HMG20A-211ENST00000560867 PDE4DQ08499 809 aa11.29□□□□□ -0.6
HMG20A-211ENST00000560867 METTL3Q86U44 580 aaKnown RBP11.28□□□□□ -0.6
HMG20A-211ENST00000560867 NEUROD2Q15784 382 aa11.27□□□□□ -0.61
HMG20A-211ENST00000560867 POTEEQ6S8J3 1075 aa11.27□□□□□ -0.61
HMG20A-211ENST00000560867 PXYLP1Q8TE99 480 aa11.27□□□□□ -0.61
HMG20A-211ENST00000560867 RABGEF1Q9UJ41 708 aa11.27□□□□□ -0.61
HMG20A-211ENST00000560867 TSKSQ9UJT2 592 aa11.27□□□□□ -0.61
HMG20A-211ENST00000560867 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.26□□□□□ -0.61
HMG20A-211ENST00000560867 CLCN1P35523 988 aa11.26□□□□□ -0.61
HMG20A-211ENST00000560867 PSEN2P49810 448 aa11.25□□□□□ -0.61
HMG20A-211ENST00000560867 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
HMG20A-211ENST00000560867 TATDN2Q93075 761 aa11.23□□□□□ -0.61
HMG20A-211ENST00000560867 EYA1Q99502 592 aa11.23□□□□□ -0.61
HMG20A-211ENST00000560867 POTEB3A0JP26 581 aa11.22□□□□□ -0.61
HMG20A-211ENST00000560867 POTEBQ6S5H4 581 aa11.22□□□□□ -0.61
HMG20A-211ENST00000560867 LAPTM4BQ86VI4 370 aa11.22□□□□□ -0.61
HMG20A-211ENST00000560867 NBPF3Q9H094 633 aa11.22□□□□□ -0.61
HMG20A-211ENST00000560867 GPCPD1Q9NPB8 672 aa11.22□□□□□ -0.61
HMG20A-211ENST00000560867 VPS9D1Q9Y2B5 631 aa11.22□□□□□ -0.61
HMG20A-211ENST00000560867 DNAJB2P25686 324 aa11.21□□□□□ -0.61
HMG20A-211ENST00000560867 LSM11P83369 360 aaKnown RBP eCLIP11.21□□□□□ -0.61
HMG20A-211ENST00000560867 TTLL12Q14166 644 aaPredicted RBP11.21□□□□□ -0.61
HMG20A-211ENST00000560867 PROX2Q3B8N5 592 aa11.21□□□□□ -0.61
HMG20A-211ENST00000560867 PARP9Q8IXQ6 854 aa11.21□□□□□ -0.61
HMG20A-211ENST00000560867 PNMA3Q9UL41 463 aa11.21□□□□□ -0.61
HMG20A-211ENST00000560867 DMRTA1Q5VZB9 504 aa11.2□□□□□ -0.62
HMG20A-211ENST00000560867 NUDT18Q6ZVK8 323 aa11.2□□□□□ -0.62
HMG20A-211ENST00000560867 TMUB1Q9BVT8 246 aa11.2□□□□□ -0.62
HMG20A-211ENST00000560867 KDM4CQ9H3R0 1056 aa11.2□□□□□ -0.62
HMG20A-211ENST00000560867 KIAA1468Q9P260 1216 aa11.2□□□□□ -0.62
HMG20A-211ENST00000560867 AXIN2Q9Y2T1 843 aa11.2□□□□□ -0.62
HMG20A-211ENST00000560867 TMEM132AQ24JP5 1023 aa11.19□□□□□ -0.62
HMG20A-211ENST00000560867 RCCD1A6NED2 376 aa11.17□□□□□ -0.62
HMG20A-211ENST00000560867 DDRGK1Q96HY6 314 aa11.17□□□□□ -0.62
HMG20A-211ENST00000560867 PHOX2BQ99453 314 aa11.17□□□□□ -0.62
HMG20A-211ENST00000560867 FAM98CQ17RN3 349 aaKnown RBP11.16□□□□□ -0.62
HMG20A-211ENST00000560867 ADGRD1Q6QNK2 874 aa11.16□□□□□ -0.62
HMG20A-211ENST00000560867 TMEM134Q9H6X4 195 aa11.16□□□□□ -0.62
HMG20A-211ENST00000560867 BHMG1C9JSJ3 638 aaPredicted RBP11.15□□□□□ -0.62
HMG20A-211ENST00000560867 MDM2Q00987 491 aaPredicted RBP11.15□□□□□ -0.62
HMG20A-211ENST00000560867 GIGYF2Q6Y7W6 1299 aaKnown RBP11.15□□□□□ -0.62
HMG20A-211ENST00000560867 FAM161AQ3B820 660 aa11.14□□□□□ -0.63
HMG20A-211ENST00000560867 SULF1Q8IWU6 871 aa11.14□□□□□ -0.63
HMG20A-211ENST00000560867 SLC4A3P48751 1232 aa11.13□□□□□ -0.63
HMG20A-211ENST00000560867 GPBP1L1Q9HC44 474 aaPredicted RBP11.13□□□□□ -0.63
HMG20A-211ENST00000560867 NECTIN2Q92692 538 aa11.12□□□□□ -0.63
HMG20A-211ENST00000560867 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
HMG20A-211ENST00000560867 HRO43593 1189 aa11.11□□□□□ -0.63
HMG20A-211ENST00000560867 HDGFP51858 240 aaKnown RBP11.11□□□□□ -0.63
HMG20A-211ENST00000560867 MRPL50Q8N5N7 158 aaKnown RBP11.1□□□□□ -0.63
HMG20A-211ENST00000560867 C3orf80F5H4A9 247 aa11.09□□□□□ -0.63
HMG20A-211ENST00000560867 RSPH4AQ5TD94 716 aa11.09□□□□□ -0.63
HMG20A-211ENST00000560867 POTEGQ6S5H5 508 aa11.09□□□□□ -0.63
HMG20A-211ENST00000560867 SMAPO00193 183 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms