RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 KHSRPQ92945 711 aaKnown RBP eCLIP11.77□□□□□ -0.532e-6■□□□□ 9.4
MARK3-220ENST00000560417 KDM4CQ9H3R0 1056 aa11.77□□□□□ -0.53
MARK3-220ENST00000560417 NUDT7P0C024 238 aa11.76□□□□□ -0.53
MARK3-220ENST00000560417 RBM33Q96EV2 1170 aaKnown RBP11.76□□□□□ -0.53
MARK3-220ENST00000560417 RIMBP2O15034 1052 aa11.75□□□□□ -0.53
MARK3-220ENST00000560417 ZDHHC16Q969W1 377 aa11.72□□□□□ -0.53
MARK3-220ENST00000560417 ZNF454Q8N9F8 522 aa11.71□□□□□ -0.53
MARK3-220ENST00000560417 C6orf132Q5T0Z8 1188 aa11.7□□□□□ -0.54
MARK3-220ENST00000560417 PARP9Q8IXQ6 854 aa11.7□□□□□ -0.54
MARK3-220ENST00000560417 ADAM33Q9BZ11 813 aa11.69□□□□□ -0.54
MARK3-220ENST00000560417 DAXXQ9UER7 740 aaPredicted RBP11.69□□□□□ -0.54
MARK3-220ENST00000560417 ZNF710Q8N1W2 664 aa11.68□□□□□ -0.54
MARK3-220ENST00000560417 CERKQ8TCT0 537 aa11.68□□□□□ -0.54
MARK3-220ENST00000560417 LHX6Q9UPM6 363 aa11.67□□□□□ -0.54
MARK3-220ENST00000560417 IL27Q8NEV9 243 aa11.66□□□□□ -0.54
MARK3-220ENST00000560417 TTC13Q8NBP0 860 aa11.65□□□□□ -0.54
MARK3-220ENST00000560417 FAM117AQ9C073 453 aa11.65□□□□□ -0.54
MARK3-220ENST00000560417 RBM27Q9P2N5 1060 aaKnown RBP11.65□□□□□ -0.54
MARK3-220ENST00000560417 TIMELESSQ9UNS1 1208 aa11.65□□□□□ -0.54
MARK3-220ENST00000560417 SNPHO15079 494 aa11.64□□□□□ -0.55
MARK3-220ENST00000560417 HOXB1P14653 301 aaPredicted RBP11.64□□□□□ -0.55
MARK3-220ENST00000560417 OTUD5Q96G74 571 aa11.63□□□□□ -0.55
MARK3-220ENST00000560417 PHOX2BQ99453 314 aa11.63□□□□□ -0.55
MARK3-220ENST00000560417 TMUB1Q9BVT8 246 aa11.63□□□□□ -0.55
MARK3-220ENST00000560417 REPIN1Q9BWE0 567 aaKnown RBP11.63□□□□□ -0.55
MARK3-220ENST00000560417 PSDA5PKW4 1024 aaPredicted RBP11.62□□□□□ -0.55
MARK3-220ENST00000560417 PADI6Q6TGC4 694 aa11.62□□□□□ -0.55
MARK3-220ENST00000560417 PLEKHG3A1L390 1219 aa11.61□□□□□ -0.55
MARK3-220ENST00000560417 BCL2L12Q9HB09 334 aa11.61□□□□□ -0.55
MARK3-220ENST00000560417 TTLL12Q14166 644 aaPredicted RBP11.6□□□□□ -0.55
MARK3-220ENST00000560417 PPP4R3BQ5MIZ7 849 aa11.6□□□□□ -0.55
MARK3-220ENST00000560417 GIGYF2Q6Y7W6 1299 aaKnown RBP11.59□□□□□ -0.55
MARK3-220ENST00000560417 METTL3Q86U44 580 aaKnown RBP11.59□□□□□ -0.55
MARK3-220ENST00000560417 DDRGK1Q96HY6 314 aa11.59□□□□□ -0.55
MARK3-220ENST00000560417 ADGRG1Q9Y653 693 aa11.59□□□□□ -0.55
MARK3-220ENST00000560417 PRSS12P56730 875 aa11.58□□□□□ -0.56
MARK3-220ENST00000560417 OATP04181 439 aa11.57□□□□□ -0.56
MARK3-220ENST00000560417 MS4A1P11836 297 aa11.57□□□□□ -0.56
MARK3-220ENST00000560417 FAM161AQ3B820 660 aa11.57□□□□□ -0.56
MARK3-220ENST00000560417 ERICH6Q7L0X2 663 aa11.57□□□□□ -0.56
MARK3-220ENST00000560417 PXYLP1Q8TE99 480 aa11.57□□□□□ -0.56
MARK3-220ENST00000560417 COL9A1P20849 921 aa11.56□□□□□ -0.56
MARK3-220ENST00000560417 CLCN1P35523 988 aa11.56□□□□□ -0.56
MARK3-220ENST00000560417 CDCA7LQ96GN5 454 aa11.56□□□□□ -0.56
MARK3-220ENST00000560417 GPCPD1Q9NPB8 672 aa11.55□□□□□ -0.56
MARK3-220ENST00000560417 FAM198AQ9UFP1 575 aa11.54□□□□□ -0.56
MARK3-220ENST00000560417 PPP1R3GB7ZBB8 358 aa11.53□□□□□ -0.56
MARK3-220ENST00000560417 MDM2Q00987 491 aaPredicted RBP11.53□□□□□ -0.56
MARK3-220ENST00000560417 PTPREP23469 700 aa11.52□□□□□ -0.57
MARK3-220ENST00000560417 GOPCQ9HD26 462 aa11.51□□□□□ -0.57
MARK3-220ENST00000560417 LHX8Q68G74 356 aa11.5□□□□□ -0.57
MARK3-220ENST00000560417 TSKSQ9UJT2 592 aa11.5□□□□□ -0.57
MARK3-220ENST00000560417 SSTR3P32745 418 aaPredicted RBP11.48□□□□□ -0.57
MARK3-220ENST00000560417 RBM46Q8TBY0 533 aaKnown RBP11.48□□□□□ -0.57
MARK3-220ENST00000560417 NLRP7Q8WX94 980 aa11.48□□□□□ -0.57
MARK3-220ENST00000560417 EYA1Q99502 592 aa11.48□□□□□ -0.57
MARK3-220ENST00000560417 FAM217BQ9NTX9 383 aaPredicted RBP11.48□□□□□ -0.57
MARK3-220ENST00000560417 TRIM6-TRIM34B2RNG4 842 aa11.46□□□□□ -0.57
MARK3-220ENST00000560417 C3orf80F5H4A9 247 aa11.46□□□□□ -0.57
MARK3-220ENST00000560417 ONECUT3O60422 494 aaPredicted RBP11.44□□□□□ -0.58
MARK3-220ENST00000560417 C14orf37Q86TY3 774 aa11.44□□□□□ -0.58
MARK3-220ENST00000560417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.43□□□□□ -0.58
MARK3-220ENST00000560417 RCCD1A6NED2 376 aa11.42□□□□□ -0.58
MARK3-220ENST00000560417 NUDT18Q6ZVK8 323 aa11.42□□□□□ -0.58
MARK3-220ENST00000560417 SH3D19Q5HYK7 790 aa11.41□□□□□ -0.58
MARK3-220ENST00000560417 TATDN2Q93075 761 aa11.41□□□□□ -0.58
MARK3-220ENST00000560417 KCNK17Q96T54 332 aa11.41□□□□□ -0.58
MARK3-220ENST00000560417 BEGAINQ9BUH8 593 aa11.41□□□□□ -0.58
MARK3-220ENST00000560417 NBPF26B4DH59 902 aa11.4□□□□□ -0.58
MARK3-220ENST00000560417 PROX2Q3B8N5 592 aa11.4□□□□□ -0.58
MARK3-220ENST00000560417 POTEEQ6S8J3 1075 aa11.4□□□□□ -0.58
MARK3-220ENST00000560417 ZBED2Q9BTP6 218 aa11.4□□□□□ -0.58
MARK3-220ENST00000560417 ST18O60284 1047 aa11.39□□□□□ -0.59
MARK3-220ENST00000560417 PACS2Q86VP3 889 aa11.39□□□□□ -0.59
MARK3-220ENST00000560417 PNMA3Q9UL41 463 aa11.39□□□□□ -0.59
MARK3-220ENST00000560417 DNAJB2P25686 324 aa11.37□□□□□ -0.59
MARK3-220ENST00000560417 PSEN2P49810 448 aa11.37□□□□□ -0.59
MARK3-220ENST00000560417 VARS2Q5ST30 1063 aaKnown RBP11.37□□□□□ -0.59
MARK3-220ENST00000560417 ERBB3P21860 1342 aa11.36□□□□□ -0.59
MARK3-220ENST00000560417 ARHGAP33O14559 1287 aa11.36□□□□□ -0.59
MARK3-220ENST00000560417 SKIV2LQ15477 1246 aaKnown RBP11.36□□□□□ -0.59
MARK3-220ENST00000560417 SLC4A5Q9BY07 1137 aa11.36□□□□□ -0.59
MARK3-220ENST00000560417 RSPH6AQ9H0K4 717 aa11.36□□□□□ -0.59
MARK3-220ENST00000560417 TMEM134Q9H6X4 195 aa11.36□□□□□ -0.59
MARK3-220ENST00000560417 KCNH8Q96L42 1107 aa11.35□□□□□ -0.59
MARK3-220ENST00000560417 CD46P15529 392 aa11.34□□□□□ -0.59
MARK3-220ENST00000560417 PCMTD1Q96MG8 357 aaPredicted RBP11.34□□□□□ -0.59
MARK3-220ENST00000560417 SMAPO00193 183 aa11.33□□□□□ -0.6
MARK3-220ENST00000560417 KIAA1468Q9P260 1216 aa11.33□□□□□ -0.6
MARK3-220ENST00000560417 MYSM1Q5VVJ2 828 aa11.32□□□□□ -0.6
MARK3-220ENST00000560417 PBX2P40425 430 aa11.31□□□□□ -0.6
MARK3-220ENST00000560417 EMP3P54852 163 aa11.31□□□□□ -0.6
MARK3-220ENST00000560417 DMRTA1Q5VZB9 504 aa11.31□□□□□ -0.6
MARK3-220ENST00000560417 ZNF687Q8N1G0 1237 aa11.31□□□□□ -0.6
MARK3-220ENST00000560417 RABGEF1Q9UJ41 708 aa11.31□□□□□ -0.6
MARK3-220ENST00000560417 SULF1Q8IWU6 871 aa11.3□□□□□ -0.6
MARK3-220ENST00000560417 MARVELD3Q96A59 401 aa11.3□□□□□ -0.6
MARK3-220ENST00000560417 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.3□□□□□ -0.6
MARK3-220ENST00000560417 TBC1D2Q9BYX2 928 aa11.3□□□□□ -0.6
MARK3-220ENST00000560417 DIXDC1Q155Q3 683 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms