RNA–Protein interactions for RNA: ENST00000560253.1

MEIS3-208, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,060 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-208ENST00000560253 DMRT2Q9Y5R5 561 aa22.97■■□□□ 1.27
MEIS3-208ENST00000560253 TCOF1Q13428 1488 aaKnown RBP22.96■■□□□ 1.27
MEIS3-208ENST00000560253 NPATQ14207 1427 aa22.95■■□□□ 1.26
MEIS3-208ENST00000560253 ABCC5O15440 1437 aa22.94■■□□□ 1.26
MEIS3-208ENST00000560253 SHANK2Q9UPX8 1470 aa22.93■■□□□ 1.26
MEIS3-208ENST00000560253 DAPK1P53355 1430 aa22.93■■□□□ 1.26
MEIS3-208ENST00000560253 RRP7BPQ9NSQ0 103 aa22.93■■□□□ 1.26
MEIS3-208ENST00000560253 CLTCQ00610 1675 aaKnown RBP22.93■■□□□ 1.26
MEIS3-208ENST00000560253 ANKRD30AQ9BXX3 1397 aa22.92■■□□□ 1.26
MEIS3-208ENST00000560253 LTBP4Q8N2S1 1624 aa22.92■■□□□ 1.26
MEIS3-208ENST00000560253 FAM135AQ9P2D6 1515 aa22.92■■□□□ 1.26
MEIS3-208ENST00000560253 CHIC2Q9UKJ5 165 aa22.91■■□□□ 1.26
MEIS3-208ENST00000560253 DUOX2Q9NRD8 1548 aa22.91■■□□□ 1.26
MEIS3-208ENST00000560253 KIF15Q9NS87 1388 aa22.9■■□□□ 1.26
MEIS3-208ENST00000560253 DNMT1P26358 1616 aaKnown RBP22.89■■□□□ 1.25
MEIS3-208ENST00000560253 PTPRTO14522 1441 aa22.88■■□□□ 1.25
MEIS3-208ENST00000560253 KDM5DQ9BY66 1539 aa22.87■■□□□ 1.25
MEIS3-208ENST00000560253 IQSEC2Q5JU85 1478 aa22.87■■□□□ 1.25
MEIS3-208ENST00000560253 EIF2AK4Q9P2K8 1649 aaKnown RBP22.86■■□□□ 1.25
MEIS3-208ENST00000560253 CROCC2H7BZ55 1655 aa22.84■■□□□ 1.25
MEIS3-208ENST00000560253 PTPRKQ15262 1439 aa22.84■■□□□ 1.25
MEIS3-208ENST00000560253 ERBINQ96RT1 1412 aa22.84■■□□□ 1.25
MEIS3-208ENST00000560253 PPARGC1BQ86YN6 1023 aaKnown RBP22.84■■□□□ 1.25
MEIS3-208ENST00000560253 KANK1Q14678 1352 aa22.82■■□□□ 1.24
MEIS3-208ENST00000560253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.8■■□□□ 1.24
MEIS3-208ENST00000560253 NCOA1Q15788 1441 aa22.8■■□□□ 1.24
MEIS3-208ENST00000560253 RNF17Q9BXT8 1623 aaKnown RBP22.79■■□□□ 1.24
MEIS3-208ENST00000560253 PZPP20742 1482 aa22.79■■□□□ 1.24
MEIS3-208ENST00000560253 TNRQ92752 1358 aa22.78■■□□□ 1.24
MEIS3-208ENST00000560253 FBXO31Q5XUX0 539 aaPredicted RBP22.78■■□□□ 1.24
MEIS3-208ENST00000560253 ZC3H13Q5T200 1668 aaKnown RBP22.75■■□□□ 1.23
MEIS3-208ENST00000560253 ADGRL2O95490 1459 aa22.75■■□□□ 1.23
MEIS3-208ENST00000560253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.74■■□□□ 1.23
MEIS3-208ENST00000560253 ABCC3O15438 1527 aa22.73■■□□□ 1.23
MEIS3-208ENST00000560253 ITGAEP38570 1179 aa22.73■■□□□ 1.23
MEIS3-208ENST00000560253 PKD2Q13563 968 aa22.73■■□□□ 1.23
MEIS3-208ENST00000560253 THEMISQ8N1K5 641 aaPredicted RBP22.72■■□□□ 1.23
MEIS3-208ENST00000560253 A2ML1A8K2U0 1454 aa22.71■■□□□ 1.23
MEIS3-208ENST00000560253 CEP170BQ9Y4F5 1589 aaPredicted RBP22.71■■□□□ 1.23
MEIS3-208ENST00000560253 MYO3AQ8NEV4 1616 aa22.71■■□□□ 1.23
MEIS3-208ENST00000560253 ANKRD50Q9ULJ7 1429 aa22.7■■□□□ 1.22
MEIS3-208ENST00000560253 CAMSAP1Q5T5Y3 1602 aa22.7■■□□□ 1.22
MEIS3-208ENST00000560253 NLRP1Q9C000 1473 aa22.68■■□□□ 1.22
MEIS3-208ENST00000560253 ROCK1Q13464 1354 aa22.68■■□□□ 1.22
MEIS3-208ENST00000560253 ZNF142P52746 1687 aaPredicted RBP22.68■■□□□ 1.22
MEIS3-208ENST00000560253 PRDM15P57071 1507 aaPredicted RBP22.67■■□□□ 1.22
MEIS3-208ENST00000560253 PLA2R1Q13018 1463 aa22.66■■□□□ 1.22
MEIS3-208ENST00000560253 NCKAP5LQ9HCH0 1330 aa22.66■■□□□ 1.22
MEIS3-208ENST00000560253 MROH1Q8NDA8 1641 aa22.66■■□□□ 1.22
MEIS3-208ENST00000560253 ARHGAP31Q2M1Z3 1444 aa22.65■■□□□ 1.22
MEIS3-208ENST00000560253 MED1Q15648 1581 aaPredicted RBP22.64■■□□□ 1.22
MEIS3-208ENST00000560253 UBAP1LF5GYI3 381 aa22.64■■□□□ 1.21
MEIS3-208ENST00000560253 ANKLE2Q86XL3 938 aa22.64■■□□□ 1.21
MEIS3-208ENST00000560253 CEP152O94986 1710 aa22.63■■□□□ 1.21
MEIS3-208ENST00000560253 DEPDC5O75140 1603 aa22.63■■□□□ 1.21
MEIS3-208ENST00000560253 ERVK-7P63135 1459 aa22.62■■□□□ 1.21
MEIS3-208ENST00000560253 UGGT1Q9NYU2 1555 aa22.6■■□□□ 1.21
MEIS3-208ENST00000560253 STAG3Q9UJ98 1225 aa22.6■■□□□ 1.21
MEIS3-208ENST00000560253 RRBP1Q9P2E9 1410 aaKnown RBP22.59■■□□□ 1.21
MEIS3-208ENST00000560253 LMTK2Q8IWU2 1503 aa22.58■■□□□ 1.21
MEIS3-208ENST00000560253 CFAP65Q6ZU64 1925 aaKnown RBP22.58■■□□□ 1.21
MEIS3-208ENST00000560253 ZNF335Q9H4Z2 1342 aaPredicted RBP22.57■■□□□ 1.2
MEIS3-208ENST00000560253 VWDEQ8N2E2 1590 aa22.54■■□□□ 1.2
MEIS3-208ENST00000560253 SLC52A1Q9NWF4 448 aa22.52■■□□□ 1.2
MEIS3-208ENST00000560253 HSPA1LP34931 641 aa22.51■■□□□ 1.19
MEIS3-208ENST00000560253 EID1Q9Y6B2 187 aa22.51■■□□□ 1.19
MEIS3-208ENST00000560253 NUP155O75694 1391 aa22.5■■□□□ 1.19
MEIS3-208ENST00000560253 RPRD2Q5VT52 1461 aaKnown RBP22.5■■□□□ 1.19
MEIS3-208ENST00000560253 EFCAB6Q5THR3 1501 aa22.48■■□□□ 1.19
MEIS3-208ENST00000560253 IDI1Q13907 227 aa22.48■■□□□ 1.19
MEIS3-208ENST00000560253 UNC13BO14795 1591 aa22.46■■□□□ 1.19
MEIS3-208ENST00000560253 TXNDC2Q86VQ3 553 aa22.46■■□□□ 1.19
MEIS3-208ENST00000560253 POLR1AO95602 1720 aaPredicted RBP22.45■■□□□ 1.19
MEIS3-208ENST00000560253 TET3O43151 1660 aa22.45■■□□□ 1.18
MEIS3-208ENST00000560253 NPHP4O75161 1426 aaPredicted RBP22.44■■□□□ 1.18
MEIS3-208ENST00000560253 NOS1P29475 1434 aa22.44■■□□□ 1.18
MEIS3-208ENST00000560253 HDGFP51858 240 aaKnown RBP22.44■■□□□ 1.18
MEIS3-208ENST00000560253 MED14O60244 1454 aa22.41■■□□□ 1.18
MEIS3-208ENST00000560253 UBR1Q8IWV7 1749 aa22.41■■□□□ 1.18
MEIS3-208ENST00000560253 GCC2Q8IWJ2 1684 aa22.41■■□□□ 1.18
MEIS3-208ENST00000560253 TRIM52Q96A61 297 aa22.4■■□□□ 1.18
MEIS3-208ENST00000560253 PIK3C2BO00750 1634 aa22.39■■□□□ 1.17
MEIS3-208ENST00000560253 IQGAP3Q86VI3 1631 aa22.39■■□□□ 1.17
MEIS3-208ENST00000560253 TMEM2Q9UHN6 1383 aa22.38■■□□□ 1.17
MEIS3-208ENST00000560253 CHGAP10645 457 aaKnown RBP22.38■■□□□ 1.17
MEIS3-208ENST00000560253 SCAF11Q99590 1463 aaKnown RBP22.38■■□□□ 1.17
MEIS3-208ENST00000560253 NAIPQ13075 1403 aa22.38■■□□□ 1.17
MEIS3-208ENST00000560253 NEURL4Q96JN8 1562 aa22.38■■□□□ 1.17
MEIS3-208ENST00000560253 SLIT1O75093 1534 aa22.37■■□□□ 1.17
MEIS3-208ENST00000560253 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
MEIS3-208ENST00000560253 LTKP29376 864 aa22.36■■□□□ 1.17
MEIS3-208ENST00000560253 PIP4K2BP78356 416 aa22.36■■□□□ 1.17
MEIS3-208ENST00000560253 SYNMO15061 1565 aa22.36■■□□□ 1.17
MEIS3-208ENST00000560253 KDM5AP29375 1690 aaKnown RBP22.36■■□□□ 1.17
MEIS3-208ENST00000560253 ARHGAP23Q9P227 1491 aa22.35■■□□□ 1.17
MEIS3-208ENST00000560253 HFM1A2PYH4 1435 aa22.35■■□□□ 1.17
MEIS3-208ENST00000560253 BCANQ96GW7 911 aa22.35■■□□□ 1.17
MEIS3-208ENST00000560253 SCAF1Q9H7N4 1312 aaKnown RBP22.34■■□□□ 1.17
MEIS3-208ENST00000560253 ACIN1Q9UKV3 1341 aaKnown RBP22.33■■□□□ 1.17
MEIS3-208ENST00000560253 IQGAP1P46940 1657 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms