RNA–Protein interactions for RNA: ENST00000560080.1

RNF111-209, Transcript of ring finger protein 111, humanhuman

TSL 3

Gene RNF111, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-209ENST00000560080 ANKK1Q8NFD2 765 aa14.28□□□□□ -0.12
RNF111-209ENST00000560080 RGS20O76081 388 aa14.26□□□□□ -0.13
RNF111-209ENST00000560080 COL9A1P20849 921 aa14.26□□□□□ -0.13
RNF111-209ENST00000560080 PROX2Q3B8N5 592 aa14.26□□□□□ -0.13
RNF111-209ENST00000560080 LAPTM4BQ86VI4 370 aa14.26□□□□□ -0.13
RNF111-209ENST00000560080 BBXQ8WY36 941 aaPredicted RBP14.25□□□□□ -0.13
RNF111-209ENST00000560080 DPYSL4O14531 572 aa14.24□□□□□ -0.13
RNF111-209ENST00000560080 ONECUT3O60422 494 aaPredicted RBP14.23□□□□□ -0.13
RNF111-209ENST00000560080 C6orf132Q5T0Z8 1188 aa14.22□□□□□ -0.13
RNF111-209ENST00000560080 KIAA1468Q9P260 1216 aa14.2□□□□□ -0.14
RNF111-209ENST00000560080 A0A0G2JS52 829 aa14.17□□□□□ -0.14
RNF111-209ENST00000560080 NYAP1Q6ZVC0 841 aa14.16□□□□□ -0.14
RNF111-209ENST00000560080 RBM33Q96EV2 1170 aaKnown RBP14.16□□□□□ -0.14
RNF111-209ENST00000560080 ZFRQ96KR1 1074 aaKnown RBP14.16□□□□□ -0.14
RNF111-209ENST00000560080 SOWAHBA6NEL2 793 aa14.15□□□□□ -0.14
RNF111-209ENST00000560080 DDX12PQ92771 950 aa14.15□□□□□ -0.14
RNF111-209ENST00000560080 BCAMP50895 628 aa14.14□□□□□ -0.15
RNF111-209ENST00000560080 TRIM6-TRIM34B2RNG4 842 aa14.13□□□□□ -0.15
RNF111-209ENST00000560080 SPRYD3Q8NCJ5 442 aa14.13□□□□□ -0.15
RNF111-209ENST00000560080 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.13□□□□□ -0.15
RNF111-209ENST00000560080 SPDYE16A6NNV3 312 aaPredicted RBP14.1□□□□□ -0.15
RNF111-209ENST00000560080 FAM98CQ17RN3 349 aaKnown RBP14.1□□□□□ -0.15
RNF111-209ENST00000560080 SEPT9Q9UHD8 586 aaPredicted RBP14.1□□□□□ -0.15
RNF111-209ENST00000560080 ITGBL1O95965 494 aaPredicted RBP14.09□□□□□ -0.15
RNF111-209ENST00000560080 NBR1Q14596 966 aa14.09□□□□□ -0.15
RNF111-209ENST00000560080 PDIA6Q15084 440 aa14.08□□□□□ -0.16
RNF111-209ENST00000560080 PACS2Q86VP3 889 aa14.08□□□□□ -0.16
RNF111-209ENST00000560080 MAP3K7O43318 606 aa14.07□□□□□ -0.16
RNF111-209ENST00000560080 EN1Q05925 392 aaPredicted RBP14.07□□□□□ -0.16
RNF111-209ENST00000560080 IRX2Q9BZI1 471 aaPredicted RBP14.06□□□□□ -0.16
RNF111-209ENST00000560080 LRCH3Q96II8 777 aa14.05□□□□□ -0.16
RNF111-209ENST00000560080 WBP1LQ9NX94 342 aa14.05□□□□□ -0.16
RNF111-209ENST00000560080 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.05□□□□□ -0.16
RNF111-209ENST00000560080 WDR70Q9NW82 654 aa14.04□□□□□ -0.16
RNF111-209ENST00000560080 TSR3Q9UJK0 312 aaKnown RBP14.03□□□□□ -0.16
RNF111-209ENST00000560080 KCNC4Q03721 635 aa14.02□□□□□ -0.17
RNF111-209ENST00000560080 E2F4Q16254 413 aa14.02□□□□□ -0.17
RNF111-209ENST00000560080 TSR1Q2NL82 804 aaKnown RBP14□□□□□ -0.17
RNF111-209ENST00000560080 HPS5Q9UPZ3 1129 aa14□□□□□ -0.17
RNF111-209ENST00000560080 CERKQ8TCT0 537 aa13.99□□□□□ -0.17
RNF111-209ENST00000560080 AMER1Q5JTC6 1135 aaPredicted RBP13.98□□□□□ -0.17
RNF111-209ENST00000560080 TSKSQ9UJT2 592 aa13.98□□□□□ -0.17
RNF111-209ENST00000560080 ARIH1Q9Y4X5 557 aaPredicted RBP13.96□□□□□ -0.17
RNF111-209ENST00000560080 CDCA7LQ96GN5 454 aa13.95□□□□□ -0.18
RNF111-209ENST00000560080 PRSS12P56730 875 aa13.94□□□□□ -0.18
RNF111-209ENST00000560080 PPP4CP60510 307 aa13.94□□□□□ -0.18
RNF111-209ENST00000560080 CFAP44Q96MT7 982 aa13.94□□□□□ -0.18
RNF111-209ENST00000560080 GRXCR2A6NFK2 248 aa13.93□□□□□ -0.18
RNF111-209ENST00000560080 PAXIP1Q6ZW49 1069 aaPredicted RBP13.93□□□□□ -0.18
RNF111-209ENST00000560080 NBPF26B4DH59 902 aa13.9□□□□□ -0.18
RNF111-209ENST00000560080 HDGFP51858 240 aaKnown RBP13.88□□□□□ -0.19
RNF111-209ENST00000560080 SMAPO00193 183 aa13.86□□□□□ -0.19
RNF111-209ENST00000560080 SAMD7Q7Z3H4 446 aa13.86□□□□□ -0.19
RNF111-209ENST00000560080 TATDN2Q93075 761 aa13.86□□□□□ -0.19
RNF111-209ENST00000560080 PNMA3Q9UL41 463 aa13.86□□□□□ -0.19
RNF111-209ENST00000560080 RBM27Q9P2N5 1060 aaKnown RBP13.83□□□□□ -0.2
RNF111-209ENST00000560080 OSBPP22059 807 aa13.82□□□□□ -0.2
RNF111-209ENST00000560080 FAM198AQ9UFP1 575 aa13.82□□□□□ -0.2
RNF111-209ENST00000560080 PRIM1P49642 420 aaKnown RBP13.81□□□□□ -0.2
RNF111-209ENST00000560080 NECTIN2Q92692 538 aa13.79□□□□□ -0.2
RNF111-209ENST00000560080 NUDT18Q6ZVK8 323 aa13.78□□□□□ -0.2
RNF111-209ENST00000560080 RNF40O75150 1001 aa13.77□□□□□ -0.21
RNF111-209ENST00000560080 Q6ZNB5 142 aa13.77□□□□□ -0.21
RNF111-209ENST00000560080 CDHR5Q9HBB8 845 aa13.77□□□□□ -0.21
RNF111-209ENST00000560080 IL21Q9HBE4 155 aa13.77□□□□□ -0.21
RNF111-209ENST00000560080 TJAP1Q5JTD0 557 aa13.76□□□□□ -0.21
RNF111-209ENST00000560080 RTN4Q9NQC3 1192 aaKnown RBP13.76□□□□□ -0.21
RNF111-209ENST00000560080 LAPTM4AQ15012 233 aa13.75□□□□□ -0.21
RNF111-209ENST00000560080 MTRQ99707 1265 aa13.74□□□□□ -0.21
RNF111-209ENST00000560080 SLC4A3P48751 1232 aa13.73□□□□□ -0.21
RNF111-209ENST00000560080 C3orf80F5H4A9 247 aa13.72□□□□□ -0.21
RNF111-209ENST00000560080 SLF2Q8IX21 1173 aa13.69□□□□□ -0.22
RNF111-209ENST00000560080 PADI6Q6TGC4 694 aa13.68□□□□□ -0.22
RNF111-209ENST00000560080 TTC13Q8NBP0 860 aa13.68□□□□□ -0.22
RNF111-209ENST00000560080 NPDC1Q9NQX5 325 aaPredicted RBP13.66□□□□□ -0.22
RNF111-209ENST00000560080 APLP1P51693 650 aa13.65□□□□□ -0.22
RNF111-209ENST00000560080 SWT1Q5T5J6 900 aaKnown RBP13.65□□□□□ -0.22
RNF111-209ENST00000560080 PPP1R18Q6NYC8 613 aa13.65□□□□□ -0.22
RNF111-209ENST00000560080 PRKD2Q9BZL6 878 aa13.65□□□□□ -0.22
RNF111-209ENST00000560080 GFRA3O60609 400 aa13.64□□□□□ -0.23
RNF111-209ENST00000560080 ARHGEF1Q92888 912 aaKnown RBP13.64□□□□□ -0.23
RNF111-209ENST00000560080 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.63□□□□□ -0.23
RNF111-209ENST00000560080 GGCXP38435 758 aa13.62□□□□□ -0.23
RNF111-209ENST00000560080 ZNF516Q92618 1163 aa13.62□□□□□ -0.23
RNF111-209ENST00000560080 PRR14Q9BWN1 585 aa13.62□□□□□ -0.23
RNF111-209ENST00000560080 V9GY48 417 aaPredicted RBP13.62□□□□□ -0.23
RNF111-209ENST00000560080 EYA1Q99502 592 aa13.58□□□□□ -0.24
RNF111-209ENST00000560080 COPS2P61201 443 aa13.56□□□□□ -0.24
RNF111-209ENST00000560080 NRG2O14511 850 aaPredicted RBP13.54□□□□□ -0.24
RNF111-209ENST00000560080 MLLT3P42568 568 aaPredicted RBP13.54□□□□□ -0.24
RNF111-209ENST00000560080 TRAF7Q6Q0C0 670 aa13.54□□□□□ -0.24
RNF111-209ENST00000560080 NKX2-3Q8TAU0 364 aa13.53□□□□□ -0.24
RNF111-209ENST00000560080 RBM46Q8TBY0 533 aaKnown RBP13.53□□□□□ -0.24
RNF111-209ENST00000560080 TMUB1Q9BVT8 246 aa13.53□□□□□ -0.24
RNF111-209ENST00000560080 DNAJB2P25686 324 aa13.52□□□□□ -0.25
RNF111-209ENST00000560080 TSHZ2Q9NRE2 1034 aa13.52□□□□□ -0.25
RNF111-209ENST00000560080 PCDHB3Q9Y5E6 796 aa13.52□□□□□ -0.25
RNF111-209ENST00000560080 ZPR1O75312 459 aa13.51□□□□□ -0.25
RNF111-209ENST00000560080 PTGDRQ13258 359 aa13.51□□□□□ -0.25
RNF111-209ENST00000560080 KCNV2Q8TDN2 545 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms