RNA–Protein interactions for RNA: ENST00000559601.2

AP3S2-210, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-210ENST00000559601 RABGEF1Q9UJ41 708 aa9.95□□□□□ -0.82
AP3S2-210ENST00000559601 EPAS1Q99814 870 aa9.94□□□□□ -0.82
AP3S2-210ENST00000559601 GOLGA8CPA6NN73 597 aa9.93□□□□□ -0.82
AP3S2-210ENST00000559601 ONECUT3O60422 494 aaPredicted RBP9.93□□□□□ -0.82
AP3S2-210ENST00000559601 WNT2BQ93097 391 aa9.93□□□□□ -0.82
AP3S2-210ENST00000559601 DPYSL4O14531 572 aa9.9□□□□□ -0.82
AP3S2-210ENST00000559601 AMER1Q5JTC6 1135 aaPredicted RBP9.9□□□□□ -0.82
AP3S2-210ENST00000559601 LAPTM4BQ86VI4 370 aa9.9□□□□□ -0.82
AP3S2-210ENST00000559601 COL9A1P20849 921 aa9.89□□□□□ -0.83
AP3S2-210ENST00000559601 PDIA6Q15084 440 aa9.87□□□□□ -0.83
AP3S2-210ENST00000559601 SPRYD3Q8NCJ5 442 aa9.87□□□□□ -0.83
AP3S2-210ENST00000559601 PROX2Q3B8N5 592 aa9.86□□□□□ -0.83
AP3S2-210ENST00000559601 C6orf132Q5T0Z8 1188 aa9.86□□□□□ -0.83
AP3S2-210ENST00000559601 ARIH1Q9Y4X5 557 aaPredicted RBP9.86□□□□□ -0.83
AP3S2-210ENST00000559601 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.85□□□□□ -0.83
AP3S2-210ENST00000559601 SPDYE16A6NNV3 312 aaPredicted RBP9.84□□□□□ -0.83
AP3S2-210ENST00000559601 Q6ZNB5 142 aa9.84□□□□□ -0.83
AP3S2-210ENST00000559601 ANKK1Q8NFD2 765 aa9.84□□□□□ -0.83
AP3S2-210ENST00000559601 NYAP1Q6ZVC0 841 aa9.83□□□□□ -0.84
AP3S2-210ENST00000559601 TRIM6-TRIM34B2RNG4 842 aa9.82□□□□□ -0.84
AP3S2-210ENST00000559601 EN1Q05925 392 aaPredicted RBP9.81□□□□□ -0.84
AP3S2-210ENST00000559601 KIAA1468Q9P260 1216 aa9.81□□□□□ -0.84
AP3S2-210ENST00000559601 SOWAHBA6NEL2 793 aa9.8□□□□□ -0.84
AP3S2-210ENST00000559601 ITGBL1O95965 494 aaPredicted RBP9.79□□□□□ -0.84
AP3S2-210ENST00000559601 ZFRQ96KR1 1074 aaKnown RBP9.79□□□□□ -0.84
AP3S2-210ENST00000559601 E2F4Q16254 413 aa9.78□□□□□ -0.84
AP3S2-210ENST00000559601 DDX12PQ92771 950 aa9.78□□□□□ -0.84
AP3S2-210ENST00000559601 FAM98CQ17RN3 349 aaKnown RBP9.77□□□□□ -0.85
AP3S2-210ENST00000559601 NBR1Q14596 966 aa9.76□□□□□ -0.85
AP3S2-210ENST00000559601 CERKQ8TCT0 537 aa9.75□□□□□ -0.85
AP3S2-210ENST00000559601 RBM33Q96EV2 1170 aaKnown RBP9.75□□□□□ -0.85
AP3S2-210ENST00000559601 BCAMP50895 628 aa9.74□□□□□ -0.85
AP3S2-210ENST00000559601 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
AP3S2-210ENST00000559601 MAP3K7O43318 606 aa9.73□□□□□ -0.85
AP3S2-210ENST00000559601 TSR1Q2NL82 804 aaKnown RBP9.72□□□□□ -0.85
AP3S2-210ENST00000559601 PACS2Q86VP3 889 aa9.72□□□□□ -0.85
AP3S2-210ENST00000559601 SEPT9Q9UHD8 586 aaPredicted RBP9.72□□□□□ -0.85
AP3S2-210ENST00000559601 WDR70Q9NW82 654 aa9.71□□□□□ -0.86
AP3S2-210ENST00000559601 TSKSQ9UJT2 592 aa9.71□□□□□ -0.86
AP3S2-210ENST00000559601 PAXIP1Q6ZW49 1069 aaPredicted RBP9.7□□□□□ -0.86
AP3S2-210ENST00000559601 RBM27Q9P2N5 1060 aaKnown RBP9.7□□□□□ -0.86
AP3S2-210ENST00000559601 TSR3Q9UJK0 312 aaKnown RBP9.7□□□□□ -0.86
AP3S2-210ENST00000559601 LRCH3Q96II8 777 aa9.69□□□□□ -0.86
AP3S2-210ENST00000559601 WBP1LQ9NX94 342 aa9.69□□□□□ -0.86
AP3S2-210ENST00000559601 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.69□□□□□ -0.86
AP3S2-210ENST00000559601 LCE2BO14633 110 aa9.68□□□□□ -0.86
AP3S2-210ENST00000559601 PRSS12P56730 875 aa9.68□□□□□ -0.86
AP3S2-210ENST00000559601 CDCA7LQ96GN5 454 aa9.68□□□□□ -0.86
AP3S2-210ENST00000559601 KCNC4Q03721 635 aa9.67□□□□□ -0.86
AP3S2-210ENST00000559601 CFAP44Q96MT7 982 aa9.67□□□□□ -0.86
AP3S2-210ENST00000559601 PRIM1P49642 420 aaKnown RBP9.66□□□□□ -0.86
AP3S2-210ENST00000559601 OSBPP22059 807 aa9.65□□□□□ -0.86
AP3S2-210ENST00000559601 HPS5Q9UPZ3 1129 aa9.64□□□□□ -0.87
AP3S2-210ENST00000559601 NBPF26B4DH59 902 aa9.63□□□□□ -0.87
AP3S2-210ENST00000559601 LAPTM4AQ15012 233 aa9.63□□□□□ -0.87
AP3S2-210ENST00000559601 FAM198AQ9UFP1 575 aa9.63□□□□□ -0.87
AP3S2-210ENST00000559601 GRXCR2A6NFK2 248 aa9.62□□□□□ -0.87
AP3S2-210ENST00000559601 GFRA3O60609 400 aa9.62□□□□□ -0.87
AP3S2-210ENST00000559601 TRAF7Q6Q0C0 670 aa9.62□□□□□ -0.87
AP3S2-210ENST00000559601 TTC13Q8NBP0 860 aa9.6□□□□□ -0.87
AP3S2-210ENST00000559601 TATDN2Q93075 761 aa9.6□□□□□ -0.87
AP3S2-210ENST00000559601 PPP4CP60510 307 aa9.59□□□□□ -0.87
AP3S2-210ENST00000559601 SAMD7Q7Z3H4 446 aa9.58□□□□□ -0.88
AP3S2-210ENST00000559601 CDHR5Q9HBB8 845 aa9.58□□□□□ -0.88
AP3S2-210ENST00000559601 ARHGEF1Q92888 912 aaKnown RBP9.57□□□□□ -0.88
AP3S2-210ENST00000559601 PNMA3Q9UL41 463 aa9.57□□□□□ -0.88
AP3S2-210ENST00000559601 C3orf80F5H4A9 247 aa9.56□□□□□ -0.88
AP3S2-210ENST00000559601 NECTIN2Q92692 538 aa9.56□□□□□ -0.88
AP3S2-210ENST00000559601 SMAPO00193 183 aa9.55□□□□□ -0.88
AP3S2-210ENST00000559601 NPDC1Q9NQX5 325 aaPredicted RBP9.55□□□□□ -0.88
AP3S2-210ENST00000559601 TJAP1Q5JTD0 557 aa9.54□□□□□ -0.88
AP3S2-210ENST00000559601 NUDT18Q6ZVK8 323 aa9.53□□□□□ -0.88
AP3S2-210ENST00000559601 HDGFP51858 240 aaKnown RBP9.52□□□□□ -0.89
AP3S2-210ENST00000559601 PRKD2Q9BZL6 878 aa9.52□□□□□ -0.89
AP3S2-210ENST00000559601 IL21Q9HBE4 155 aa9.51□□□□□ -0.89
AP3S2-210ENST00000559601 NRG2O14511 850 aaPredicted RBP9.5□□□□□ -0.89
AP3S2-210ENST00000559601 PADI6Q6TGC4 694 aa9.5□□□□□ -0.89
AP3S2-210ENST00000559601 MTRQ99707 1265 aa9.49□□□□□ -0.89
AP3S2-210ENST00000559601 SLF2Q8IX21 1173 aa9.48□□□□□ -0.89
AP3S2-210ENST00000559601 KCNV2Q8TDN2 545 aa9.48□□□□□ -0.89
AP3S2-210ENST00000559601 EYA1Q99502 592 aa9.48□□□□□ -0.89
AP3S2-210ENST00000559601 TSHZ2Q9NRE2 1034 aa9.47□□□□□ -0.89
AP3S2-210ENST00000559601 APLP1P51693 650 aa9.46□□□□□ -0.9
AP3S2-210ENST00000559601 ZNF787Q6DD87 383 aa9.46□□□□□ -0.9
AP3S2-210ENST00000559601 PTGDRQ13258 359 aa9.45□□□□□ -0.9
AP3S2-210ENST00000559601 MLLT3P42568 568 aaPredicted RBP9.44□□□□□ -0.9
AP3S2-210ENST00000559601 SLC4A3P48751 1232 aa9.44□□□□□ -0.9
AP3S2-210ENST00000559601 SWT1Q5T5J6 900 aaKnown RBP9.44□□□□□ -0.9
AP3S2-210ENST00000559601 P3H3Q8IVL6 736 aa9.44□□□□□ -0.9
AP3S2-210ENST00000559601 PRR14Q9BWN1 585 aa9.44□□□□□ -0.9
AP3S2-210ENST00000559601 PPP1R18Q6NYC8 613 aa9.43□□□□□ -0.9
AP3S2-210ENST00000559601 V9GY48 417 aaPredicted RBP9.42□□□□□ -0.9
AP3S2-210ENST00000559601 RNF40O75150 1001 aa9.41□□□□□ -0.9
AP3S2-210ENST00000559601 DNAJB2P25686 324 aa9.4□□□□□ -0.9
AP3S2-210ENST00000559601 ZNF775Q96BV0 537 aaPredicted RBP9.4□□□□□ -0.9
AP3S2-210ENST00000559601 RBM46Q8TBY0 533 aaKnown RBP9.39□□□□□ -0.91
AP3S2-210ENST00000559601 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.39□□□□□ -0.91
AP3S2-210ENST00000559601 PDZRN3Q9UPQ7 1066 aa9.39□□□□□ -0.91
AP3S2-210ENST00000559601 ZNF516Q92618 1163 aa9.38□□□□□ -0.91
AP3S2-210ENST00000559601 ADGRG1Q9Y653 693 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms