RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 MRS2Q9HD23 443 aa18.38■□□□□ 0.53
CPNE6-210ENST00000558995 ABCC1P33527 1531 aa18.37■□□□□ 0.53
CPNE6-210ENST00000558995 AFAP1Q8N556 730 aa18.36■□□□□ 0.53
CPNE6-210ENST00000558995 POLR1AO95602 1720 aaPredicted RBP18.36■□□□□ 0.53
CPNE6-210ENST00000558995 PLEKHG5O94827 1062 aa18.36■□□□□ 0.53
CPNE6-210ENST00000558995 USP47Q96K76 1375 aa18.35■□□□□ 0.53
CPNE6-210ENST00000558995 FAM135AQ9P2D6 1515 aa18.35■□□□□ 0.53
CPNE6-210ENST00000558995 ZNF326Q5BKZ1 582 aaKnown RBP18.35■□□□□ 0.53
CPNE6-210ENST00000558995 ASXL2Q76L83 1435 aa18.34■□□□□ 0.53
CPNE6-210ENST00000558995 ARID4BQ4LE39 1312 aaPredicted RBP18.34■□□□□ 0.53
CPNE6-210ENST00000558995 FAM9BQ8IZU0 186 aa18.34■□□□□ 0.53
CPNE6-210ENST00000558995 UHRF1BP1Q6BDS2 1440 aa18.33■□□□□ 0.53
CPNE6-210ENST00000558995 PLXNC1O60486 1568 aa18.33■□□□□ 0.52
CPNE6-210ENST00000558995 ERICH6BQ5W0A0 696 aa18.32■□□□□ 0.52
CPNE6-210ENST00000558995 ZBED9Q6R2W3 1325 aa18.32■□□□□ 0.52
CPNE6-210ENST00000558995 FANCAO15360 1455 aa18.3■□□□□ 0.52
CPNE6-210ENST00000558995 SPAG9O60271 1321 aaKnown RBP18.3■□□□□ 0.52
CPNE6-210ENST00000558995 DHX29Q7Z478 1369 aaKnown RBP18.29■□□□□ 0.52
CPNE6-210ENST00000558995 DUOX2Q9NRD8 1548 aa18.29■□□□□ 0.52
CPNE6-210ENST00000558995 RALGAPBQ86X10 1494 aa18.29■□□□□ 0.52
CPNE6-210ENST00000558995 ARAP3Q8WWN8 1544 aa18.29■□□□□ 0.52
CPNE6-210ENST00000558995 UNC13BO14795 1591 aa18.28■□□□□ 0.52
CPNE6-210ENST00000558995 NPM1P06748 294 aaKnown RBP eCLIP18.28■□□□□ 0.52
CPNE6-210ENST00000558995 ABCA9Q8IUA7 1624 aa18.27■□□□□ 0.52
CPNE6-210ENST00000558995 KDM5CP41229 1560 aa18.27■□□□□ 0.52
CPNE6-210ENST00000558995 RBM19Q9Y4C8 960 aaKnown RBP18.26■□□□□ 0.51
CPNE6-210ENST00000558995 KDM2AQ9Y2K7 1162 aa18.26■□□□□ 0.51
CPNE6-210ENST00000558995 BCORL1Q5H9F3 1711 aa18.26■□□□□ 0.51
CPNE6-210ENST00000558995 ERBINQ96RT1 1412 aa18.26■□□□□ 0.51
CPNE6-210ENST00000558995 ROCK2O75116 1388 aaKnown RBP18.25■□□□□ 0.51
CPNE6-210ENST00000558995 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
CPNE6-210ENST00000558995 CARD11Q9BXL7 1154 aa18.25■□□□□ 0.51
CPNE6-210ENST00000558995 ZFYVE16Q7Z3T8 1539 aa18.24■□□□□ 0.51
CPNE6-210ENST00000558995 PLA2R1Q13018 1463 aa18.24■□□□□ 0.51
CPNE6-210ENST00000558995 SCAPERQ9BY12 1400 aa18.23■□□□□ 0.51
CPNE6-210ENST00000558995 DCAF11Q8TEB1 546 aa18.23■□□□□ 0.51
CPNE6-210ENST00000558995 ADGRL1O94910 1474 aa18.23■□□□□ 0.51
CPNE6-210ENST00000558995 POLR3GLQ9BT43 218 aa18.23■□□□□ 0.51
CPNE6-210ENST00000558995 SALL2Q9Y467 1007 aaPredicted RBP18.22■□□□□ 0.51
CPNE6-210ENST00000558995 CCDC144AA2RUR9 1427 aa18.22■□□□□ 0.51
CPNE6-210ENST00000558995 MYT1LQ9UL68 1186 aa18.22■□□□□ 0.51
CPNE6-210ENST00000558995 IQGAP3Q86VI3 1631 aa18.21■□□□□ 0.51
CPNE6-210ENST00000558995 RGL3Q3MIN7 710 aa18.21■□□□□ 0.51
CPNE6-210ENST00000558995 PPP4R2Q9NY27 417 aa18.21■□□□□ 0.51
CPNE6-210ENST00000558995 RTEL1-TNFRSF6BF6WH68 1400 aa18.21■□□□□ 0.51
CPNE6-210ENST00000558995 MAGI2Q86UL8 1455 aa18.21■□□□□ 0.51
CPNE6-210ENST00000558995 CCDC136Q96JN2 1154 aa18.17■□□□□ 0.5
CPNE6-210ENST00000558995 ATP7AQ04656 1500 aa18.17■□□□□ 0.5
CPNE6-210ENST00000558995 ST20-MTHFSA0A0A6YYL1 179 aa18.16■□□□□ 0.5
CPNE6-210ENST00000558995 CD109Q6YHK3 1445 aa18.15■□□□□ 0.5
CPNE6-210ENST00000558995 INO80Q9ULG1 1556 aaPredicted RBP18.15■□□□□ 0.5
CPNE6-210ENST00000558995 SMG6Q86US8 1419 aaKnown RBP18.14■□□□□ 0.49
CPNE6-210ENST00000558995 KIF3BO15066 747 aa18.13■□□□□ 0.49
CPNE6-210ENST00000558995 CNGB1Q14028 1251 aaPredicted RBP18.13■□□□□ 0.49
CPNE6-210ENST00000558995 PNISRQ8TF01 805 aaKnown RBP18.13■□□□□ 0.49
CPNE6-210ENST00000558995 CYB5RLQ6IPT4 315 aa18.12■□□□□ 0.49
CPNE6-210ENST00000558995 KTN1Q86UP2 1357 aaKnown RBP18.12■□□□□ 0.49
CPNE6-210ENST00000558995 TMC1Q8TDI8 760 aa18.11■□□□□ 0.49
CPNE6-210ENST00000558995 A2MP01023 1474 aa18.1■□□□□ 0.49
CPNE6-210ENST00000558995 PRAG1Q86YV5 1406 aa18.1■□□□□ 0.49
CPNE6-210ENST00000558995 ATP10AO60312 1499 aa18.09■□□□□ 0.49
CPNE6-210ENST00000558995 RALBP1Q15311 655 aa18.09■□□□□ 0.49
CPNE6-210ENST00000558995 NUDCQ9Y266 331 aa18.09■□□□□ 0.49
CPNE6-210ENST00000558995 NBPF1Q3BBV0 1214 aa18.08■□□□□ 0.48
CPNE6-210ENST00000558995 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
CPNE6-210ENST00000558995 E9PCH4 1651 aa18.07■□□□□ 0.48
CPNE6-210ENST00000558995 BRD4O60885 1362 aaPredicted RBP18.07■□□□□ 0.48
CPNE6-210ENST00000558995 PKNOX2Q96KN3 472 aa18.07■□□□□ 0.48
CPNE6-210ENST00000558995 MYBBP1AQ9BQG0 1328 aaKnown RBP18.07■□□□□ 0.48
CPNE6-210ENST00000558995 KIDINS220Q9ULH0 1771 aa18.06■□□□□ 0.48
CPNE6-210ENST00000558995 DEPDC5O75140 1603 aa18.06■□□□□ 0.48
CPNE6-210ENST00000558995 GPRASP1Q5JY77 1395 aa18.05■□□□□ 0.48
CPNE6-210ENST00000558995 PODXL2Q9NZ53 605 aa18.05■□□□□ 0.48
CPNE6-210ENST00000558995 RNF123Q5XPI4 1314 aa18.05■□□□□ 0.48
CPNE6-210ENST00000558995 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
CPNE6-210ENST00000558995 B4GALNT3Q6L9W6 998 aa18.04■□□□□ 0.48
CPNE6-210ENST00000558995 TRPM1Q7Z4N2 1603 aa18.04■□□□□ 0.48
CPNE6-210ENST00000558995 POGZQ7Z3K3 1410 aa18.04■□□□□ 0.48
CPNE6-210ENST00000558995 FANCIQ9NVI1 1328 aa18.04■□□□□ 0.48
CPNE6-210ENST00000558995 KANK1Q14678 1352 aa18.03■□□□□ 0.48
CPNE6-210ENST00000558995 RAPGEF3O95398 923 aa18.03■□□□□ 0.48
CPNE6-210ENST00000558995 MROH1Q8NDA8 1641 aa18.02■□□□□ 0.47
CPNE6-210ENST00000558995 VWDEQ8N2E2 1590 aa18.01■□□□□ 0.47
CPNE6-210ENST00000558995 PTPRTO14522 1441 aa18■□□□□ 0.47
CPNE6-210ENST00000558995 TRPM2O94759 1503 aa18■□□□□ 0.47
CPNE6-210ENST00000558995 PRDM15P57071 1507 aaPredicted RBP18■□□□□ 0.47
CPNE6-210ENST00000558995 TET3O43151 1660 aa17.99■□□□□ 0.47
CPNE6-210ENST00000558995 EIF2AK4Q9P2K8 1649 aaKnown RBP17.99■□□□□ 0.47
CPNE6-210ENST00000558995 CFAP74Q9C0B2 1584 aa17.98■□□□□ 0.47
CPNE6-210ENST00000558995 PARD3Q8TEW0 1356 aa17.98■□□□□ 0.47
CPNE6-210ENST00000558995 LAMC1P11047 1609 aa17.98■□□□□ 0.47
CPNE6-210ENST00000558995 NLRP13Q86W25 1043 aa17.97■□□□□ 0.47
CPNE6-210ENST00000558995 SPHKAPQ2M3C7 1700 aa17.97■□□□□ 0.47
CPNE6-210ENST00000558995 MLH3Q9UHC1 1453 aa17.97■□□□□ 0.47
CPNE6-210ENST00000558995 CLTCL1P53675 1640 aa17.97■□□□□ 0.47
CPNE6-210ENST00000558995 PER1O15534 1290 aaPredicted RBP17.96■□□□□ 0.47
CPNE6-210ENST00000558995 GGT6Q6P531 493 aa17.96■□□□□ 0.47
CPNE6-210ENST00000558995 RIMBP3CA6NJZ7 1639 aa17.96■□□□□ 0.47
CPNE6-210ENST00000558995 RIMBP3BA6NNM3 1639 aa17.96■□□□□ 0.47
CPNE6-210ENST00000558995 RIMBP3Q9UFD9 1639 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms