RNA–Protein interactions for RNA: ENST00000558583.2

SHISA9-203, Transcript of shisa family member 9, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SHISA9, Length 6,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-203ENST00000558583 GPATCH3Q96I76 525 aa19.65■□□□□ 0.74
SHISA9-203ENST00000558583 GOLGA3Q08378 1498 aa19.64■□□□□ 0.74
SHISA9-203ENST00000558583 HNRNPMP52272 730 aaKnown RBP eCLIP19.63■□□□□ 0.73
SHISA9-203ENST00000558583 CALD1Q05682 793 aaKnown RBP19.63■□□□□ 0.73
SHISA9-203ENST00000558583 C1orf141Q5JVX7 400 aa19.62■□□□□ 0.73
SHISA9-203ENST00000558583 PKD2Q13563 968 aa19.62■□□□□ 0.73
SHISA9-203ENST00000558583 TPM4P67936 248 aa19.61■□□□□ 0.73
SHISA9-203ENST00000558583 IPO9Q96P70 1041 aaKnown RBP19.61■□□□□ 0.73
SHISA9-203ENST00000558583 PTMSP20962 102 aa19.61■□□□□ 0.73
SHISA9-203ENST00000558583 ZNF592Q92610 1267 aa19.6■□□□□ 0.73
SHISA9-203ENST00000558583 NECTIN2Q92692 538 aa19.6■□□□□ 0.73
SHISA9-203ENST00000558583 ROCK2O75116 1388 aaKnown RBP19.6■□□□□ 0.73
SHISA9-203ENST00000558583 NOL10Q9BSC4 688 aaKnown RBP19.59■□□□□ 0.73
SHISA9-203ENST00000558583 SYAP1Q96A49 352 aaPredicted RBP19.59■□□□□ 0.73
SHISA9-203ENST00000558583 CEP89Q96ST8 783 aa19.58■□□□□ 0.72
SHISA9-203ENST00000558583 VPS37DQ86XT2 251 aa19.57■□□□□ 0.72
SHISA9-203ENST00000558583 RWDD1Q9H446 243 aaPredicted RBP19.57■□□□□ 0.72
SHISA9-203ENST00000558583 SMC4Q9NTJ3 1288 aa19.57■□□□□ 0.72
SHISA9-203ENST00000558583 DHX16O60231 1041 aaKnown RBP19.57■□□□□ 0.72
SHISA9-203ENST00000558583 NUTM2BA6NNL0 878 aaPredicted RBP19.57■□□□□ 0.72
SHISA9-203ENST00000558583 NUTM2EB1AL46 878 aaPredicted RBP19.57■□□□□ 0.72
SHISA9-203ENST00000558583 NUTM2AQ8IVF1 878 aaPredicted RBP19.57■□□□□ 0.72
SHISA9-203ENST00000558583 WRNQ14191 1432 aaPredicted RBP eCLIP19.57■□□□□ 0.72
SHISA9-203ENST00000558583 PIP4K2BP78356 416 aa19.56■□□□□ 0.72
SHISA9-203ENST00000558583 TRAK1Q9UPV9 953 aa19.56■□□□□ 0.72
SHISA9-203ENST00000558583 SF3B2Q13435 895 aaKnown RBP19.56■□□□□ 0.72
SHISA9-203ENST00000558583 PLIN1O60240 522 aa19.55■□□□□ 0.72
SHISA9-203ENST00000558583 EIF2S2P20042 333 aaKnown RBP19.54■□□□□ 0.72
SHISA9-203ENST00000558583 PSME1Q06323 249 aa19.54■□□□□ 0.72
SHISA9-203ENST00000558583 ZNF771Q7L3S4 317 aaPredicted RBP19.54■□□□□ 0.72
SHISA9-203ENST00000558583 CUX2O14529 1486 aa19.54■□□□□ 0.72
SHISA9-203ENST00000558583 USP35Q9P2H5 1018 aa19.54■□□□□ 0.72
SHISA9-203ENST00000558583 IPO8O15397 1037 aaKnown RBP19.54■□□□□ 0.72
SHISA9-203ENST00000558583 RRP7AQ9Y3A4 280 aaKnown RBP19.54■□□□□ 0.72
SHISA9-203ENST00000558583 FYB1O15117 783 aa19.53■□□□□ 0.72
SHISA9-203ENST00000558583 CARMIL2Q6F5E8 1435 aa19.52■□□□□ 0.72
SHISA9-203ENST00000558583 KTN1Q86UP2 1357 aaKnown RBP19.52■□□□□ 0.72
SHISA9-203ENST00000558583 EFCAB2Q5VUJ9 269 aa19.52■□□□□ 0.72
SHISA9-203ENST00000558583 TTC5Q8N0Z6 440 aa19.52■□□□□ 0.72
SHISA9-203ENST00000558583 BCL2L13Q9BXK5 485 aa19.52■□□□□ 0.71
SHISA9-203ENST00000558583 TCERG1O14776 1098 aaKnown RBP19.51■□□□□ 0.71
SHISA9-203ENST00000558583 FAM177BA6PVY3 158 aa19.51■□□□□ 0.71
SHISA9-203ENST00000558583 RILPL2Q969X0 211 aa19.51■□□□□ 0.71
SHISA9-203ENST00000558583 AMOTL1Q8IY63 956 aa19.5■□□□□ 0.71
SHISA9-203ENST00000558583 HTATSF1O43719 755 aaKnown RBP19.49■□□□□ 0.71
SHISA9-203ENST00000558583 NUTM2GQ5VZR2 741 aa19.49■□□□□ 0.71
SHISA9-203ENST00000558583 MTMR7Q9Y216 660 aa19.49■□□□□ 0.71
SHISA9-203ENST00000558583 TERF2IPQ9NYB0 399 aa19.49■□□□□ 0.71
SHISA9-203ENST00000558583 ELL2O00472 640 aaPredicted RBP19.49■□□□□ 0.71
SHISA9-203ENST00000558583 SF3A1Q15459 793 aaKnown RBP19.48■□□□□ 0.71
SHISA9-203ENST00000558583 RBM33Q96EV2 1170 aaKnown RBP19.48■□□□□ 0.71
SHISA9-203ENST00000558583 TPD52L1Q16890 204 aaPredicted RBP19.48■□□□□ 0.71
SHISA9-203ENST00000558583 TPM3P06753 285 aa19.47■□□□□ 0.71
SHISA9-203ENST00000558583 ATF3P18847 181 aa19.47■□□□□ 0.71
SHISA9-203ENST00000558583 FOSBP53539 338 aa19.47■□□□□ 0.71
SHISA9-203ENST00000558583 PMFBP1Q8TBY8 1022 aa19.46■□□□□ 0.71
SHISA9-203ENST00000558583 FAM13BQ9NYF5 915 aa19.46■□□□□ 0.71
SHISA9-203ENST00000558583 CCAR1Q8IX12 1150 aaKnown RBP19.45■□□□□ 0.7
SHISA9-203ENST00000558583 APPP05067 770 aa19.45■□□□□ 0.7
SHISA9-203ENST00000558583 SETQ01105 290 aaPredicted RBP19.44■□□□□ 0.7
SHISA9-203ENST00000558583 NUP155O75694 1391 aa19.44■□□□□ 0.7
SHISA9-203ENST00000558583 CARMIL1Q5VZK9 1371 aa19.44■□□□□ 0.7
SHISA9-203ENST00000558583 H3BQV1 296 aa19.44■□□□□ 0.7
SHISA9-203ENST00000558583 IFFO2Q5TF58 517 aa19.44■□□□□ 0.7
SHISA9-203ENST00000558583 AKAP17AQ02040 695 aaKnown RBP19.44■□□□□ 0.7
SHISA9-203ENST00000558583 CECR2Q9BXF3 1484 aa19.44■□□□□ 0.7
SHISA9-203ENST00000558583 CCER2I3L3R5 266 aa19.44■□□□□ 0.7
SHISA9-203ENST00000558583 DDX49Q9Y6V7 483 aaKnown RBP19.44■□□□□ 0.7
SHISA9-203ENST00000558583 KIF16BQ96L93 1317 aa19.43■□□□□ 0.7
SHISA9-203ENST00000558583 MCTP1Q6DN14 999 aa19.43■□□□□ 0.7
SHISA9-203ENST00000558583 FAM69CQ0P6D2 419 aa19.41■□□□□ 0.7
SHISA9-203ENST00000558583 KDM4AO75164 1064 aa19.41■□□□□ 0.7
SHISA9-203ENST00000558583 MINK1Q8N4C8 1332 aaPredicted RBP19.41■□□□□ 0.7
SHISA9-203ENST00000558583 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
SHISA9-203ENST00000558583 CFAP44Q96MT7 982 aa19.4■□□□□ 0.7
SHISA9-203ENST00000558583 TEFQ10587 303 aa19.39■□□□□ 0.7
SHISA9-203ENST00000558583 ANKRD45Q5TZF3 282 aa19.39■□□□□ 0.7
SHISA9-203ENST00000558583 CCDC43Q96MW1 224 aaKnown RBP19.39■□□□□ 0.7
SHISA9-203ENST00000558583 IBSPP21815 317 aaPredicted RBP19.39■□□□□ 0.69
SHISA9-203ENST00000558583 CCDC27Q2M243 656 aa19.38■□□□□ 0.69
SHISA9-203ENST00000558583 COG3Q96JB2 828 aa19.38■□□□□ 0.69
SHISA9-203ENST00000558583 EEA1Q15075 1411 aa19.38■□□□□ 0.69
SHISA9-203ENST00000558583 EIF3AQ14152 1382 aaKnown RBP19.38■□□□□ 0.69
SHISA9-203ENST00000558583 CSPP1Q1MSJ5 1256 aa19.38■□□□□ 0.69
SHISA9-203ENST00000558583 STRN4Q9NRL3 753 aa19.38■□□□□ 0.69
SHISA9-203ENST00000558583 PCMTD1Q96MG8 357 aaPredicted RBP19.37■□□□□ 0.69
SHISA9-203ENST00000558583 GOLGA6L19H0YKK7 550 aa19.37■□□□□ 0.69
SHISA9-203ENST00000558583 ST18O60284 1047 aa19.37■□□□□ 0.69
SHISA9-203ENST00000558583 GSE1Q14687 1217 aa19.37■□□□□ 0.69
SHISA9-203ENST00000558583 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.36■□□□□ 0.69
SHISA9-203ENST00000558583 PHF14O94880 888 aa19.36■□□□□ 0.69
SHISA9-203ENST00000558583 IKQ13123 557 aaPredicted RBP19.36■□□□□ 0.69
SHISA9-203ENST00000558583 ZNF428Q96B54 188 aa19.36■□□□□ 0.69
SHISA9-203ENST00000558583 FAM184AQ8NB25 1140 aa19.35■□□□□ 0.69
SHISA9-203ENST00000558583 HMMRO75330 724 aa19.35■□□□□ 0.69
SHISA9-203ENST00000558583 CENPJQ9HC77 1338 aaPredicted RBP19.35■□□□□ 0.69
SHISA9-203ENST00000558583 TMEM132AQ24JP5 1023 aa19.35■□□□□ 0.69
SHISA9-203ENST00000558583 RSPH6AQ9H0K4 717 aa19.34■□□□□ 0.69
SHISA9-203ENST00000558583 EXOC6Q8TAG9 804 aa19.34■□□□□ 0.69
SHISA9-203ENST00000558583 CCDC34Q96HJ3 373 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms