RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 TCERG1O14776 1098 aaKnown RBP20.13■□□□□ 0.81
AP4E1-202ENST00000558439 MORC1Q86VD1 984 aa20.13■□□□□ 0.81
AP4E1-202ENST00000558439 RPRD2Q5VT52 1461 aaKnown RBP20.12■□□□□ 0.81
AP4E1-202ENST00000558439 CRBNQ96SW2 442 aa20.12■□□□□ 0.81
AP4E1-202ENST00000558439 MSH5O43196 834 aa20.12■□□□□ 0.81
AP4E1-202ENST00000558439 DDRGK1Q96HY6 314 aa20.12■□□□□ 0.81
AP4E1-202ENST00000558439 ARID4BQ4LE39 1312 aaPredicted RBP20.12■□□□□ 0.81
AP4E1-202ENST00000558439 GOLGA2Q08379 1002 aa20.12■□□□□ 0.81
AP4E1-202ENST00000558439 AFAP1Q8N556 730 aa20.12■□□□□ 0.81
AP4E1-202ENST00000558439 CFAP53Q96M91 514 aa20.12■□□□□ 0.81
AP4E1-202ENST00000558439 SLC24A1O60721 1099 aa20.11■□□□□ 0.81
AP4E1-202ENST00000558439 U2SURPO15042 1029 aaKnown RBP20.1■□□□□ 0.81
AP4E1-202ENST00000558439 STK26Q9P289 416 aa20.09■□□□□ 0.81
AP4E1-202ENST00000558439 CAMSAP2Q08AD1 1489 aa20.09■□□□□ 0.81
AP4E1-202ENST00000558439 CTTNBP2Q8WZ74 1663 aa20.09■□□□□ 0.81
AP4E1-202ENST00000558439 TRAK1Q9UPV9 953 aa20.09■□□□□ 0.81
AP4E1-202ENST00000558439 PDE4AP27815 886 aa20.08■□□□□ 0.81
AP4E1-202ENST00000558439 ARHGEF11O15085 1522 aa20.08■□□□□ 0.8
AP4E1-202ENST00000558439 ADAMTS8Q9UP79 889 aa20.07■□□□□ 0.8
AP4E1-202ENST00000558439 RTN4Q9NQC3 1192 aaKnown RBP20.06■□□□□ 0.8
AP4E1-202ENST00000558439 RRP7AQ9Y3A4 280 aaKnown RBP20.06■□□□□ 0.8
AP4E1-202ENST00000558439 APAF1O14727 1248 aa20.05■□□□□ 0.8
AP4E1-202ENST00000558439 GRIN2AQ12879 1464 aa20.05■□□□□ 0.8
AP4E1-202ENST00000558439 BRD4O60885 1362 aaPredicted RBP20.05■□□□□ 0.8
AP4E1-202ENST00000558439 ESF1Q9H501 851 aaKnown RBP20.05■□□□□ 0.8
AP4E1-202ENST00000558439 SLC4A3P48751 1232 aa20.03■□□□□ 0.8
AP4E1-202ENST00000558439 FTSJ3Q8IY81 847 aaKnown RBP20.03■□□□□ 0.8
AP4E1-202ENST00000558439 POGKQ9P215 609 aa20.03■□□□□ 0.8
AP4E1-202ENST00000558439 PAK3O75914 559 aaPredicted RBP20.02■□□□□ 0.8
AP4E1-202ENST00000558439 SRPK2P78362 688 aaKnown RBP20.02■□□□□ 0.8
AP4E1-202ENST00000558439 SYNJ2O15056 1496 aa20.01■□□□□ 0.79
AP4E1-202ENST00000558439 NUP153P49790 1475 aaKnown RBP20.01■□□□□ 0.79
AP4E1-202ENST00000558439 CLUAP1Q96AJ1 413 aa20.01■□□□□ 0.79
AP4E1-202ENST00000558439 MAGI3Q5TCQ9 1506 aa20■□□□□ 0.79
AP4E1-202ENST00000558439 U2AF1L5P0DN76 240 aaPredicted RBP20■□□□□ 0.79
AP4E1-202ENST00000558439 U2AF1Q01081 240 aaKnown RBP eCLIP20■□□□□ 0.79
AP4E1-202ENST00000558439 GPATCH8Q9UKJ3 1502 aaKnown RBP19.99■□□□□ 0.79
AP4E1-202ENST00000558439 SMG6Q86US8 1419 aaKnown RBP19.99■□□□□ 0.79
AP4E1-202ENST00000558439 ARHGAP5Q13017 1502 aa19.98■□□□□ 0.79
AP4E1-202ENST00000558439 HSP90AA1P07900 732 aaKnown RBP19.98■□□□□ 0.79
AP4E1-202ENST00000558439 BCL2L13Q9BXK5 485 aa19.98■□□□□ 0.79
AP4E1-202ENST00000558439 CFAP70Q5T0N1 1121 aa19.97■□□□□ 0.79
AP4E1-202ENST00000558439 MAPK8IP3Q9UPT6 1336 aa19.97■□□□□ 0.79
AP4E1-202ENST00000558439 TCOF1Q13428 1488 aaKnown RBP19.96■□□□□ 0.79
AP4E1-202ENST00000558439 MAGI1Q96QZ7 1491 aaPredicted RBP19.96■□□□□ 0.79
AP4E1-202ENST00000558439 SKAP1Q86WV1 359 aa19.96■□□□□ 0.79
AP4E1-202ENST00000558439 EIF3AQ14152 1382 aaKnown RBP19.94■□□□□ 0.78
AP4E1-202ENST00000558439 PPP2R1AP30153 589 aa19.93■□□□□ 0.78
AP4E1-202ENST00000558439 WASHC2CQ9Y4E1 1318 aa19.92■□□□□ 0.78
AP4E1-202ENST00000558439 BECN1Q14457 450 aa19.92■□□□□ 0.78
AP4E1-202ENST00000558439 MLECQ14165 292 aa19.92■□□□□ 0.78
AP4E1-202ENST00000558439 EIF5BO60841 1220 aaKnown RBP19.91■□□□□ 0.78
AP4E1-202ENST00000558439 SPRYD3Q8NCJ5 442 aa19.91■□□□□ 0.78
AP4E1-202ENST00000558439 TMEM132EQ6IEE7 984 aa19.9■□□□□ 0.78
AP4E1-202ENST00000558439 COG6Q9Y2V7 657 aa19.9■□□□□ 0.78
AP4E1-202ENST00000558439 WDR62O43379 1518 aa19.9■□□□□ 0.78
AP4E1-202ENST00000558439 CENPJQ9HC77 1338 aaPredicted RBP19.89■□□□□ 0.77
AP4E1-202ENST00000558439 SAMD9Q5K651 1589 aa19.89■□□□□ 0.77
AP4E1-202ENST00000558439 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
AP4E1-202ENST00000558439 ABCA5Q8WWZ7 1642 aa19.87■□□□□ 0.77
AP4E1-202ENST00000558439 KDM6BO15054 1643 aa19.87■□□□□ 0.77
AP4E1-202ENST00000558439 SLKQ9H2G2 1235 aaPredicted RBP19.86■□□□□ 0.77
AP4E1-202ENST00000558439 CENPQQ7L2Z9 268 aaPredicted RBP19.86■□□□□ 0.77
AP4E1-202ENST00000558439 RAPGEF6Q8TEU7 1601 aa19.85■□□□□ 0.77
AP4E1-202ENST00000558439 ATP10BO94823 1461 aa19.84■□□□□ 0.77
AP4E1-202ENST00000558439 ERBINQ96RT1 1412 aa19.84■□□□□ 0.77
AP4E1-202ENST00000558439 ADAMTS12P58397 1594 aa19.84■□□□□ 0.77
AP4E1-202ENST00000558439 C20orf194Q5TEA3 1177 aa19.83■□□□□ 0.76
AP4E1-202ENST00000558439 DISP1Q96F81 1524 aa19.83■□□□□ 0.76
AP4E1-202ENST00000558439 CCDC141Q6ZP82 1450 aa19.83■□□□□ 0.76
AP4E1-202ENST00000558439 E9PSI1 815 aa19.83■□□□□ 0.76
AP4E1-202ENST00000558439 PLEKHG5O94827 1062 aa19.83■□□□□ 0.76
AP4E1-202ENST00000558439 PZPP20742 1482 aa19.82■□□□□ 0.76
AP4E1-202ENST00000558439 MS4A1P11836 297 aa19.82■□□□□ 0.76
AP4E1-202ENST00000558439 DHX29Q7Z478 1369 aaKnown RBP19.81■□□□□ 0.76
AP4E1-202ENST00000558439 SOX12O15370 315 aa19.81■□□□□ 0.76
AP4E1-202ENST00000558439 BCAR3O75815 825 aa19.8■□□□□ 0.76
AP4E1-202ENST00000558439 FAM161AQ3B820 660 aa19.8■□□□□ 0.76
AP4E1-202ENST00000558439 PANK1Q8TE04 598 aa19.8■□□□□ 0.76
AP4E1-202ENST00000558439 PLEKHH2Q8IVE3 1493 aa19.8■□□□□ 0.76
AP4E1-202ENST00000558439 KIAA0556O60303 1618 aa19.79■□□□□ 0.76
AP4E1-202ENST00000558439 DISP3Q9P2K9 1392 aa19.79■□□□□ 0.76
AP4E1-202ENST00000558439 SLC12A5Q9H2X9 1139 aa19.79■□□□□ 0.76
AP4E1-202ENST00000558439 TEX14Q8IWB6 1497 aa19.79■□□□□ 0.76
AP4E1-202ENST00000558439 ITPRIPQ8IWB1 547 aa19.79■□□□□ 0.76
AP4E1-202ENST00000558439 SMC4Q9NTJ3 1288 aa19.79■□□□□ 0.76
AP4E1-202ENST00000558439 MYH16Q9H6N6 1097 aa19.77■□□□□ 0.76
AP4E1-202ENST00000558439 SCAPERQ9BY12 1400 aa19.77■□□□□ 0.76
AP4E1-202ENST00000558439 KIF14Q15058 1648 aa19.77■□□□□ 0.75
AP4E1-202ENST00000558439 BACH2Q9BYV9 841 aa19.76■□□□□ 0.75
AP4E1-202ENST00000558439 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.76■□□□□ 0.75
AP4E1-202ENST00000558439 MINK1Q8N4C8 1332 aaPredicted RBP19.75■□□□□ 0.75
AP4E1-202ENST00000558439 RWDD1Q9H446 243 aaPredicted RBP19.74■□□□□ 0.75
AP4E1-202ENST00000558439 MTHFSP49914 203 aa19.74■□□□□ 0.75
AP4E1-202ENST00000558439 CGNL1Q0VF96 1302 aa19.73■□□□□ 0.75
AP4E1-202ENST00000558439 HDGFL2Q7Z4V5 671 aaPredicted RBP19.73■□□□□ 0.75
AP4E1-202ENST00000558439 CABP2Q9NPB3 220 aa19.73■□□□□ 0.75
AP4E1-202ENST00000558439 DNMT1P26358 1616 aaKnown RBP19.72■□□□□ 0.75
AP4E1-202ENST00000558439 TCP11L2Q8N4U5 519 aa19.71■□□□□ 0.75
AP4E1-202ENST00000558439 SPATA31E1Q6ZUB1 1445 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms