RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 BCORL1Q5H9F3 1711 aa14.63□□□□□ -0.07
TPM1-210ENST00000558264 DUOX2Q9NRD8 1548 aa14.63□□□□□ -0.07
TPM1-210ENST00000558264 UNC13BO14795 1591 aa14.63□□□□□ -0.07
TPM1-210ENST00000558264 HNRNPUQ00839 825 aaKnown RBP eCLIP14.63□□□□□ -0.07
TPM1-210ENST00000558264 PRKRIP1Q9H875 184 aaPredicted RBP14.62□□□□□ -0.07
TPM1-210ENST00000558264 ASXL2Q76L83 1435 aa14.62□□□□□ -0.07
TPM1-210ENST00000558264 ST20-MTHFSA0A0A6YYL1 179 aa14.62□□□□□ -0.07
TPM1-210ENST00000558264 FANCAO15360 1455 aa14.61□□□□□ -0.07
TPM1-210ENST00000558264 RALGAPBQ86X10 1494 aa14.61□□□□□ -0.07
TPM1-210ENST00000558264 BCANQ96GW7 911 aa14.61□□□□□ -0.07
TPM1-210ENST00000558264 KDM5CP41229 1560 aa14.61□□□□□ -0.07
TPM1-210ENST00000558264 UHRF1BP1Q6BDS2 1440 aa14.61□□□□□ -0.07
TPM1-210ENST00000558264 ROCK2O75116 1388 aaKnown RBP14.6□□□□□ -0.07
TPM1-210ENST00000558264 NBPF1Q3BBV0 1214 aa14.6□□□□□ -0.07
TPM1-210ENST00000558264 FAM9BQ8IZU0 186 aa14.6□□□□□ -0.07
TPM1-210ENST00000558264 ERBINQ96RT1 1412 aa14.6□□□□□ -0.07
TPM1-210ENST00000558264 IQGAP3Q86VI3 1631 aa14.59□□□□□ -0.07
TPM1-210ENST00000558264 MRS2Q9HD23 443 aa14.59□□□□□ -0.07
TPM1-210ENST00000558264 SCAPERQ9BY12 1400 aa14.58□□□□□ -0.08
TPM1-210ENST00000558264 ZFYVE16Q7Z3T8 1539 aa14.58□□□□□ -0.08
TPM1-210ENST00000558264 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
TPM1-210ENST00000558264 ADGRL1O94910 1474 aa14.57□□□□□ -0.08
TPM1-210ENST00000558264 FKBP8Q14318 412 aa14.57□□□□□ -0.08
TPM1-210ENST00000558264 A2MP01023 1474 aa14.56□□□□□ -0.08
TPM1-210ENST00000558264 KIF3BO15066 747 aa14.56□□□□□ -0.08
TPM1-210ENST00000558264 PRAG1Q86YV5 1406 aa14.56□□□□□ -0.08
TPM1-210ENST00000558264 SENP3-EIF4A1A0A087X0R7 540 aa14.55□□□□□ -0.08
TPM1-210ENST00000558264 POLR1AO95602 1720 aaPredicted RBP14.55□□□□□ -0.08
TPM1-210ENST00000558264 MAGI2Q86UL8 1455 aa14.54□□□□□ -0.08
TPM1-210ENST00000558264 ABCA9Q8IUA7 1624 aa14.54□□□□□ -0.08
TPM1-210ENST00000558264 DHX29Q7Z478 1369 aaKnown RBP14.53□□□□□ -0.08
TPM1-210ENST00000558264 ATP7AQ04656 1500 aa14.53□□□□□ -0.08
TPM1-210ENST00000558264 ARAP3Q8WWN8 1544 aa14.52□□□□□ -0.09
TPM1-210ENST00000558264 RTEL1-TNFRSF6BF6WH68 1400 aa14.51□□□□□ -0.09
TPM1-210ENST00000558264 PHF23Q9BUL5 403 aaPredicted RBP14.5□□□□□ -0.09
TPM1-210ENST00000558264 TRPM1Q7Z4N2 1603 aa14.5□□□□□ -0.09
TPM1-210ENST00000558264 E9PCH4 1651 aa14.49□□□□□ -0.09
TPM1-210ENST00000558264 INO80Q9ULG1 1556 aaPredicted RBP14.49□□□□□ -0.09
TPM1-210ENST00000558264 ATP10AO60312 1499 aa14.48□□□□□ -0.09
TPM1-210ENST00000558264 IRX6P78412 446 aaPredicted RBP14.47□□□□□ -0.09
TPM1-210ENST00000558264 CD109Q6YHK3 1445 aa14.47□□□□□ -0.09
TPM1-210ENST00000558264 NEFLP07196 543 aa14.46□□□□□ -0.09
TPM1-210ENST00000558264 KANK1Q14678 1352 aa14.45□□□□□ -0.1
TPM1-210ENST00000558264 ARID4BQ4LE39 1312 aaPredicted RBP14.45□□□□□ -0.1
TPM1-210ENST00000558264 UGGT1Q9NYU2 1555 aa14.44□□□□□ -0.1
TPM1-210ENST00000558264 DISP3Q9P2K9 1392 aa14.44□□□□□ -0.1
TPM1-210ENST00000558264 RAPGEF3O95398 923 aa14.43□□□□□ -0.1
TPM1-210ENST00000558264 GGT6Q6P531 493 aa14.43□□□□□ -0.1
TPM1-210ENST00000558264 CLTCL1P53675 1640 aa14.43□□□□□ -0.1
TPM1-210ENST00000558264 CYB5RLQ6IPT4 315 aa14.43□□□□□ -0.1
TPM1-210ENST00000558264 DEPDC5O75140 1603 aa14.42□□□□□ -0.1
TPM1-210ENST00000558264 KIDINS220Q9ULH0 1771 aa14.42□□□□□ -0.1
TPM1-210ENST00000558264 TESK2Q96S53 571 aa14.42□□□□□ -0.1
TPM1-210ENST00000558264 GPRASP1Q5JY77 1395 aa14.42□□□□□ -0.1
TPM1-210ENST00000558264 TRPM2O94759 1503 aa14.41□□□□□ -0.1
TPM1-210ENST00000558264 SPHKAPQ2M3C7 1700 aa14.41□□□□□ -0.1
TPM1-210ENST00000558264 ZNF518AQ6AHZ1 1483 aa14.41□□□□□ -0.1
TPM1-210ENST00000558264 MROH1Q8NDA8 1641 aa14.4□□□□□ -0.1
TPM1-210ENST00000558264 CHGAP10645 457 aaKnown RBP14.4□□□□□ -0.1
TPM1-210ENST00000558264 TMC1Q8TDI8 760 aa14.4□□□□□ -0.1
TPM1-210ENST00000558264 PRDM15P57071 1507 aaPredicted RBP14.4□□□□□ -0.1
TPM1-210ENST00000558264 PTPRTO14522 1441 aa14.4□□□□□ -0.1
TPM1-210ENST00000558264 TET3O43151 1660 aa14.4□□□□□ -0.1
TPM1-210ENST00000558264 PELP1Q8IZL8 1130 aaKnown RBP14.39□□□□□ -0.11
TPM1-210ENST00000558264 POGZQ7Z3K3 1410 aa14.38□□□□□ -0.11
TPM1-210ENST00000558264 CC2D1BQ5T0F9 858 aaKnown RBP14.38□□□□□ -0.11
TPM1-210ENST00000558264 EIF2AK4Q9P2K8 1649 aaKnown RBP14.38□□□□□ -0.11
TPM1-210ENST00000558264 VWDEQ8N2E2 1590 aa14.37□□□□□ -0.11
TPM1-210ENST00000558264 MADDQ8WXG6 1647 aa14.37□□□□□ -0.11
TPM1-210ENST00000558264 COL17A1Q9UMD9 1497 aaPredicted RBP14.37□□□□□ -0.11
TPM1-210ENST00000558264 ZBED9Q6R2W3 1325 aa14.36□□□□□ -0.11
TPM1-210ENST00000558264 CEP152O94986 1710 aa14.36□□□□□ -0.11
TPM1-210ENST00000558264 TMF1P82094 1093 aa14.36□□□□□ -0.11
TPM1-210ENST00000558264 PANK3Q9H999 370 aa14.36□□□□□ -0.11
TPM1-210ENST00000558264 CFAP70Q5T0N1 1121 aa14.35□□□□□ -0.11
TPM1-210ENST00000558264 CFAP65Q6ZU64 1925 aaKnown RBP14.35□□□□□ -0.11
TPM1-210ENST00000558264 ADGRF5Q8IZF2 1346 aa14.35□□□□□ -0.11
TPM1-210ENST00000558264 SENP3Q9H4L4 574 aaPredicted RBP14.35□□□□□ -0.11
TPM1-210ENST00000558264 PPRC1Q5VV67 1664 aaKnown RBP14.34□□□□□ -0.11
TPM1-210ENST00000558264 PNISRQ8TF01 805 aaKnown RBP14.34□□□□□ -0.11
TPM1-210ENST00000558264 MYBBP1AQ9BQG0 1328 aaKnown RBP14.34□□□□□ -0.11
TPM1-210ENST00000558264 FRMPD1Q5SYB0 1578 aa14.33□□□□□ -0.11
TPM1-210ENST00000558264 PER1O15534 1290 aaPredicted RBP14.33□□□□□ -0.12
TPM1-210ENST00000558264 RNF17Q9BXT8 1623 aaKnown RBP14.33□□□□□ -0.12
TPM1-210ENST00000558264 EFCAB6Q5THR3 1501 aa14.33□□□□□ -0.12
TPM1-210ENST00000558264 LAMC1P11047 1609 aa14.33□□□□□ -0.12
TPM1-210ENST00000558264 WASHC2CQ9Y4E1 1318 aa14.32□□□□□ -0.12
TPM1-210ENST00000558264 SALL2Q9Y467 1007 aaPredicted RBP14.32□□□□□ -0.12
TPM1-210ENST00000558264 KTN1Q86UP2 1357 aaKnown RBP14.32□□□□□ -0.12
TPM1-210ENST00000558264 HECW2Q9P2P5 1572 aa14.32□□□□□ -0.12
TPM1-210ENST00000558264 NUTM2DQ5VT03 806 aaPredicted RBP14.31□□□□□ -0.12
TPM1-210ENST00000558264 ABCA6Q8N139 1617 aa14.31□□□□□ -0.12
TPM1-210ENST00000558264 RALBP1Q15311 655 aa14.31□□□□□ -0.12
TPM1-210ENST00000558264 MLH3Q9UHC1 1453 aa14.3□□□□□ -0.12
TPM1-210ENST00000558264 CFAP74Q9C0B2 1584 aa14.3□□□□□ -0.12
TPM1-210ENST00000558264 NPATQ14207 1427 aa14.3□□□□□ -0.12
TPM1-210ENST00000558264 MROH2AA6NES4 1674 aa14.29□□□□□ -0.12
TPM1-210ENST00000558264 TSHZ2Q9NRE2 1034 aa14.28□□□□□ -0.12
TPM1-210ENST00000558264 SCAF11Q99590 1463 aaKnown RBP14.28□□□□□ -0.12
TPM1-210ENST00000558264 PARD3Q8TEW0 1356 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms