RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 PBX2P40425 430 aa12.18□□□□□ -0.46
CLPX-202ENST00000558103 FOSBP53539 338 aa12.15□□□□□ -0.46
CLPX-202ENST00000558103 ZNF454Q8N9F8 522 aa12.14□□□□□ -0.47
CLPX-202ENST00000558103 JPH4Q96JJ6 628 aa12.14□□□□□ -0.47
CLPX-202ENST00000558103 PPP4R3BQ5MIZ7 849 aa12.13□□□□□ -0.47
CLPX-202ENST00000558103 PHF14O94880 888 aa12.12□□□□□ -0.47
CLPX-202ENST00000558103 ADGRD1Q6QNK2 874 aa12.12□□□□□ -0.47
CLPX-202ENST00000558103 DDX12PQ92771 950 aa12.12□□□□□ -0.47
CLPX-202ENST00000558103 PCDHGA10Q9Y5H3 936 aa12.12□□□□□ -0.47
CLPX-202ENST00000558103 ZDHHC16Q969W1 377 aa12.1□□□□□ -0.47
CLPX-202ENST00000558103 IRX2Q9BZI1 471 aaPredicted RBP12.1□□□□□ -0.47
CLPX-202ENST00000558103 EPAS1Q99814 870 aa12.09□□□□□ -0.47
CLPX-202ENST00000558103 GRXCR2A6NFK2 248 aa12.08□□□□□ -0.48
CLPX-202ENST00000558103 TYW1BQ6NUM6 668 aa12.08□□□□□ -0.48
CLPX-202ENST00000558103 SEMA3EO15041 775 aa12.07□□□□□ -0.48
CLPX-202ENST00000558103 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
CLPX-202ENST00000558103 KCTD12Q96CX2 325 aaKnown RBP12.05□□□□□ -0.48
CLPX-202ENST00000558103 ADAM33Q9BZ11 813 aa12.05□□□□□ -0.48
CLPX-202ENST00000558103 BCL2L12Q9HB09 334 aa12.05□□□□□ -0.48
CLPX-202ENST00000558103 MLLT3P42568 568 aaPredicted RBP12.04□□□□□ -0.48
CLPX-202ENST00000558103 ARHGAP33O14559 1287 aa12.03□□□□□ -0.48
CLPX-202ENST00000558103 NBR1Q14596 966 aa12.03□□□□□ -0.48
CLPX-202ENST00000558103 TESPA1A2RU30 521 aaPredicted RBP12.02□□□□□ -0.49
CLPX-202ENST00000558103 OSBPP22059 807 aa12.02□□□□□ -0.49
CLPX-202ENST00000558103 RBM33Q96EV2 1170 aaKnown RBP12□□□□□ -0.49
CLPX-202ENST00000558103 HRO43593 1189 aa11.99□□□□□ -0.49
CLPX-202ENST00000558103 PTPREP23469 700 aa11.99□□□□□ -0.49
CLPX-202ENST00000558103 NCAPD3P42695 1498 aa11.98□□□□□ -0.49
CLPX-202ENST00000558103 PRIM1P49642 420 aaKnown RBP11.98□□□□□ -0.49
CLPX-202ENST00000558103 PSEN2P49810 448 aa11.98□□□□□ -0.49
CLPX-202ENST00000558103 EN1Q05925 392 aaPredicted RBP11.98□□□□□ -0.49
CLPX-202ENST00000558103 C6orf132Q5T0Z8 1188 aa11.98□□□□□ -0.49
CLPX-202ENST00000558103 DMRTA1Q5VZB9 504 aa11.98□□□□□ -0.49
CLPX-202ENST00000558103 KCNK17Q96T54 332 aa11.98□□□□□ -0.49
CLPX-202ENST00000558103 SMYD5Q6GMV2 418 aa11.97□□□□□ -0.49
CLPX-202ENST00000558103 SMARCA4P51532 1647 aa11.97□□□□□ -0.49
CLPX-202ENST00000558103 KCNH8Q96L42 1107 aa11.96□□□□□ -0.49
CLPX-202ENST00000558103 MAP3K7O43318 606 aa11.95□□□□□ -0.5
CLPX-202ENST00000558103 HMGXB3Q12766 1538 aa11.95□□□□□ -0.5
CLPX-202ENST00000558103 RGS20O76081 388 aa11.94□□□□□ -0.5
CLPX-202ENST00000558103 PTPN5P54829 565 aa11.94□□□□□ -0.5
CLPX-202ENST00000558103 ATAD2BQ9ULI0 1458 aa11.94□□□□□ -0.5
CLPX-202ENST00000558103 TK2O00142 265 aa11.93□□□□□ -0.5
CLPX-202ENST00000558103 TSR1Q2NL82 804 aaKnown RBP11.93□□□□□ -0.5
CLPX-202ENST00000558103 SMARCA2P51531 1590 aa11.92□□□□□ -0.5
CLPX-202ENST00000558103 CUX2O14529 1486 aa11.92□□□□□ -0.5
CLPX-202ENST00000558103 COL9A1P20849 921 aa11.91□□□□□ -0.5
CLPX-202ENST00000558103 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
CLPX-202ENST00000558103 STAC3Q96MF2 364 aa11.9□□□□□ -0.5
CLPX-202ENST00000558103 SLC4A5Q9BY07 1137 aa11.89□□□□□ -0.51
CLPX-202ENST00000558103 ZBED2Q9BTP6 218 aa11.88□□□□□ -0.51
CLPX-202ENST00000558103 PEG3Q9GZU2 1588 aa11.88□□□□□ -0.51
CLPX-202ENST00000558103 TULP1O00294 542 aaPredicted RBP11.87□□□□□ -0.51
CLPX-202ENST00000558103 RBM26Q5T8P6 1007 aaKnown RBP11.87□□□□□ -0.51
CLPX-202ENST00000558103 BAZ1AQ9NRL2 1556 aaPredicted RBP11.87□□□□□ -0.51
CLPX-202ENST00000558103 A0A0G2JS52 829 aa11.86□□□□□ -0.51
CLPX-202ENST00000558103 CERKQ8TCT0 537 aa11.86□□□□□ -0.51
CLPX-202ENST00000558103 VPS9D1Q9Y2B5 631 aa11.86□□□□□ -0.51
CLPX-202ENST00000558103 ERCC6Q03468 1493 aa11.86□□□□□ -0.51
CLPX-202ENST00000558103 CDHR5Q9HBB8 845 aa11.85□□□□□ -0.51
CLPX-202ENST00000558103 NPDC1Q9NQX5 325 aaPredicted RBP11.85□□□□□ -0.51
CLPX-202ENST00000558103 NUTM2FA1L443 756 aa11.84□□□□□ -0.51
CLPX-202ENST00000558103 IFFO2Q5TF58 517 aa11.83□□□□□ -0.52
CLPX-202ENST00000558103 Q6ZNB5 142 aa11.83□□□□□ -0.52
CLPX-202ENST00000558103 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.82□□□□□ -0.52
CLPX-202ENST00000558103 NESP48681 1621 aa11.82□□□□□ -0.52
CLPX-202ENST00000558103 ONECUT3O60422 494 aaPredicted RBP11.81□□□□□ -0.52
CLPX-202ENST00000558103 PRSS12P56730 875 aa11.81□□□□□ -0.52
CLPX-202ENST00000558103 PROX2Q3B8N5 592 aa11.81□□□□□ -0.52
CLPX-202ENST00000558103 BAZ1BQ9UIG0 1483 aaKnown RBP11.81□□□□□ -0.52
CLPX-202ENST00000558103 THOC2Q8NI27 1593 aaKnown RBP11.8□□□□□ -0.52
CLPX-202ENST00000558103 PTGDRQ13258 359 aa11.8□□□□□ -0.52
CLPX-202ENST00000558103 BCANQ96GW7 911 aa11.8□□□□□ -0.52
CLPX-202ENST00000558103 CDCA7LQ96GN5 454 aa11.79□□□□□ -0.52
CLPX-202ENST00000558103 TRIM6-TRIM34B2RNG4 842 aa11.78□□□□□ -0.52
CLPX-202ENST00000558103 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
CLPX-202ENST00000558103 BHMG1C9JSJ3 638 aaPredicted RBP11.77□□□□□ -0.53
CLPX-202ENST00000558103 FCHSD2O94868 740 aa11.77□□□□□ -0.53
CLPX-202ENST00000558103 KIAA1468Q9P260 1216 aa11.77□□□□□ -0.53
CLPX-202ENST00000558103 RABGEF1Q9UJ41 708 aa11.77□□□□□ -0.53
CLPX-202ENST00000558103 MROH2BQ7Z745 1585 aa11.76□□□□□ -0.53
CLPX-202ENST00000558103 KIF21AQ7Z4S6 1674 aa11.76□□□□□ -0.53
CLPX-202ENST00000558103 TSKSQ9UJT2 592 aa11.76□□□□□ -0.53
CLPX-202ENST00000558103 PACS2Q86VP3 889 aa11.75□□□□□ -0.53
CLPX-202ENST00000558103 RBM27Q9P2N5 1060 aaKnown RBP11.75□□□□□ -0.53
CLPX-202ENST00000558103 LMOD2Q6P5Q4 547 aa11.74□□□□□ -0.53
CLPX-202ENST00000558103 GPIHBP1Q8IV16 184 aa11.74□□□□□ -0.53
CLPX-202ENST00000558103 FAM198AQ9UFP1 575 aa11.74□□□□□ -0.53
CLPX-202ENST00000558103 HIC1Q14526 733 aa11.73□□□□□ -0.53
CLPX-202ENST00000558103 TTC13Q8NBP0 860 aa11.73□□□□□ -0.53
CLPX-202ENST00000558103 GPR37O15354 613 aa11.71□□□□□ -0.53
CLPX-202ENST00000558103 PADI6Q6TGC4 694 aa11.71□□□□□ -0.53
CLPX-202ENST00000558103 THSD4Q6ZMP0 1018 aa11.71□□□□□ -0.53
CLPX-202ENST00000558103 NBPF3Q9H094 633 aa11.71□□□□□ -0.53
CLPX-202ENST00000558103 GNPATO15228 680 aa11.69□□□□□ -0.54
CLPX-202ENST00000558103 MRPL50Q8N5N7 158 aaKnown RBP11.69□□□□□ -0.54
CLPX-202ENST00000558103 LAPTM4BQ86VI4 370 aa11.68□□□□□ -0.54
CLPX-202ENST00000558103 TATDN2Q93075 761 aa11.68□□□□□ -0.54
CLPX-202ENST00000558103 C3orf80F5H4A9 247 aa11.66□□□□□ -0.54
CLPX-202ENST00000558103 WIZO95785 1651 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms