RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 TSPOAP1O95153 1857 aa15.43■□□□□ 0.06
GABRB3-213ENST00000557765 RNF17Q9BXT8 1623 aaKnown RBP15.41■□□□□ 0.06
GABRB3-213ENST00000557765 ARHGEF40Q8TER5 1519 aa15.41■□□□□ 0.06
GABRB3-213ENST00000557765 DIP2CQ9Y2E4 1556 aa15.41■□□□□ 0.06
GABRB3-213ENST00000557765 PRDM15P57071 1507 aaPredicted RBP15.4■□□□□ 0.06
GABRB3-213ENST00000557765 MYT1LQ9UL68 1186 aa15.4■□□□□ 0.06
GABRB3-213ENST00000557765 IQGAP3Q86VI3 1631 aa15.39■□□□□ 0.05
GABRB3-213ENST00000557765 RAPGEF3O95398 923 aa15.39■□□□□ 0.05
GABRB3-213ENST00000557765 LMTK2Q8IWU2 1503 aa15.38■□□□□ 0.05
GABRB3-213ENST00000557765 KDM6BO15054 1643 aa15.38■□□□□ 0.05
GABRB3-213ENST00000557765 ABCA6Q8N139 1617 aa15.38■□□□□ 0.05
GABRB3-213ENST00000557765 NUP155O75694 1391 aa15.37■□□□□ 0.05
GABRB3-213ENST00000557765 VWDEQ8N2E2 1590 aa15.37■□□□□ 0.05
GABRB3-213ENST00000557765 RPRD2Q5VT52 1461 aaKnown RBP15.37■□□□□ 0.05
GABRB3-213ENST00000557765 ZC3H13Q5T200 1668 aaKnown RBP15.36■□□□□ 0.05
GABRB3-213ENST00000557765 TRIM52Q96A61 297 aa15.36■□□□□ 0.05
GABRB3-213ENST00000557765 MPHOSPH9Q99550 1183 aa15.36■□□□□ 0.05
GABRB3-213ENST00000557765 SLC4A1APQ9BWU0 796 aaKnown RBP15.34■□□□□ 0.05
GABRB3-213ENST00000557765 PZPP20742 1482 aa15.33■□□□□ 0.04
GABRB3-213ENST00000557765 COL17A1Q9UMD9 1497 aaPredicted RBP15.33■□□□□ 0.04
GABRB3-213ENST00000557765 TET3O43151 1660 aa15.32■□□□□ 0.04
GABRB3-213ENST00000557765 KIF3BO15066 747 aa15.31■□□□□ 0.04
GABRB3-213ENST00000557765 ARHGAP31Q2M1Z3 1444 aa15.31■□□□□ 0.04
GABRB3-213ENST00000557765 YEATS2Q9ULM3 1422 aa15.3■□□□□ 0.04
GABRB3-213ENST00000557765 STAC3Q96MF2 364 aa15.29■□□□□ 0.04
GABRB3-213ENST00000557765 CNTLNQ9NXG0 1405 aa15.28■□□□□ 0.04
GABRB3-213ENST00000557765 MROH1Q8NDA8 1641 aa15.28■□□□□ 0.04
GABRB3-213ENST00000557765 NEURL4Q96JN8 1562 aa15.28■□□□□ 0.04
GABRB3-213ENST00000557765 ANKRD30BQ9BXX2 1392 aa15.27■□□□□ 0.04
GABRB3-213ENST00000557765 EFCAB6Q5THR3 1501 aa15.26■□□□□ 0.03
GABRB3-213ENST00000557765 PKD2Q13563 968 aa15.24■□□□□ 0.03
GABRB3-213ENST00000557765 PTPRTO14522 1441 aa15.24■□□□□ 0.03
GABRB3-213ENST00000557765 WASHC2CQ9Y4E1 1318 aa15.23■□□□□ 0.03
GABRB3-213ENST00000557765 ABCC3O15438 1527 aa15.22■□□□□ 0.03
GABRB3-213ENST00000557765 TRPM2O94759 1503 aa15.21■□□□□ 0.03
GABRB3-213ENST00000557765 CCDC144AA2RUR9 1427 aa15.2■□□□□ 0.02
GABRB3-213ENST00000557765 MROH2AA6NES4 1674 aa15.19■□□□□ 0.02
GABRB3-213ENST00000557765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.19■□□□□ 0.02
GABRB3-213ENST00000557765 ESF1Q9H501 851 aaKnown RBP15.19■□□□□ 0.02
GABRB3-213ENST00000557765 GGT6Q6P531 493 aa15.18■□□□□ 0.02
GABRB3-213ENST00000557765 TONSLQ96HA7 1378 aa15.18■□□□□ 0.02
GABRB3-213ENST00000557765 CAMSAP1Q5T5Y3 1602 aa15.17■□□□□ 0.02
GABRB3-213ENST00000557765 E9PCH4 1651 aa15.17■□□□□ 0.02
GABRB3-213ENST00000557765 SLC52A1Q9NWF4 448 aa15.17■□□□□ 0.02
GABRB3-213ENST00000557765 SPHKAPQ2M3C7 1700 aa15.15■□□□□ 0.02
GABRB3-213ENST00000557765 NOS1P29475 1434 aa15.15■□□□□ 0.02
GABRB3-213ENST00000557765 NPATQ14207 1427 aa15.14■□□□□ 0.01
GABRB3-213ENST00000557765 CEP152O94986 1710 aa15.12■□□□□ 0.01
GABRB3-213ENST00000557765 ARID4BQ4LE39 1312 aaPredicted RBP15.11■□□□□ 0.01
GABRB3-213ENST00000557765 PLA2R1Q13018 1463 aa15.1■□□□□ 0.01
GABRB3-213ENST00000557765 RPGRIP1LQ68CZ1 1315 aa15.1■□□□□ 0.01
GABRB3-213ENST00000557765 SPATA31D1Q6ZQQ2 1576 aa15.1■□□□□ 0.01
GABRB3-213ENST00000557765 KDM5AP29375 1690 aaKnown RBP15.09■□□□□ 0.01
GABRB3-213ENST00000557765 PIK3C2BO00750 1634 aa15.07■□□□□ 0
GABRB3-213ENST00000557765 ZMYM3Q14202 1370 aa15.07■□□□□ 0
GABRB3-213ENST00000557765 PPP1R15AO75807 674 aaPredicted RBP15.06■□□□□ 0
GABRB3-213ENST00000557765 UHRF1BP1Q6BDS2 1440 aa15.06■□□□□ 0
GABRB3-213ENST00000557765 ERVK-7P63135 1459 aa15.06■□□□□ 0
GABRB3-213ENST00000557765 PREX1Q8TCU6 1659 aa15.06■□□□□ 0
GABRB3-213ENST00000557765 SPATA31E1Q6ZUB1 1445 aa15.05■□□□□ -0
GABRB3-213ENST00000557765 NLRP1Q9C000 1473 aa15.05■□□□□ -0
GABRB3-213ENST00000557765 CLTCQ00610 1675 aaKnown RBP15.05■□□□□ -0
GABRB3-213ENST00000557765 KIF1BO60333 1816 aa15.04■□□□□ -0
GABRB3-213ENST00000557765 SIGLEC1Q9BZZ2 1709 aa15.04■□□□□ -0
GABRB3-213ENST00000557765 SIN3AQ96ST3 1273 aa15.04■□□□□ -0
GABRB3-213ENST00000557765 HDGFP51858 240 aaKnown RBP15.03■□□□□ -0
GABRB3-213ENST00000557765 NEUROD1Q13562 356 aa15.03■□□□□ -0
GABRB3-213ENST00000557765 FER1L4A9Z1Z3 1794 aa15.03■□□□□ -0
GABRB3-213ENST00000557765 FOXD1Q16676 465 aa15.02■□□□□ -0
GABRB3-213ENST00000557765 ADAMTSL3P82987 1691 aa15.02□□□□□ -0.01
GABRB3-213ENST00000557765 ADGRB3O60242 1522 aa15.02□□□□□ -0.01
GABRB3-213ENST00000557765 MYOM2P54296 1465 aa15.01□□□□□ -0.01
GABRB3-213ENST00000557765 ZFYVE9O95405 1425 aa15.01□□□□□ -0.01
GABRB3-213ENST00000557765 CLTCL1P53675 1640 aa15.01□□□□□ -0.01
GABRB3-213ENST00000557765 L3MBTL2Q969R5 705 aa15□□□□□ -0.01
GABRB3-213ENST00000557765 SYNMO15061 1565 aa14.99□□□□□ -0.01
GABRB3-213ENST00000557765 SLC24A1O60721 1099 aa14.98□□□□□ -0.01
GABRB3-213ENST00000557765 TNRQ92752 1358 aa14.98□□□□□ -0.01
GABRB3-213ENST00000557765 VGFO15240 615 aaPredicted RBP14.97□□□□□ -0.01
GABRB3-213ENST00000557765 MLECQ14165 292 aa14.95□□□□□ -0.02
GABRB3-213ENST00000557765 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.95□□□□□ -0.02
GABRB3-213ENST00000557765 KIAA1210Q9ULL0 1709 aa14.95□□□□□ -0.02
GABRB3-213ENST00000557765 C3P01024 1663 aa14.94□□□□□ -0.02
GABRB3-213ENST00000557765 TMEM131LA2VDJ0 1609 aa14.94□□□□□ -0.02
GABRB3-213ENST00000557765 NRXN1Q9ULB1 1477 aa14.94□□□□□ -0.02
GABRB3-213ENST00000557765 PRAG1Q86YV5 1406 aa14.93□□□□□ -0.02
GABRB3-213ENST00000557765 SETD1BQ9UPS6 1966 aaKnown RBP14.93□□□□□ -0.02
GABRB3-213ENST00000557765 LAMC1P11047 1609 aa14.93□□□□□ -0.02
GABRB3-213ENST00000557765 IDI1Q13907 227 aa14.93□□□□□ -0.02
GABRB3-213ENST00000557765 RALGAPBQ86X10 1494 aa14.93□□□□□ -0.02
GABRB3-213ENST00000557765 MADDQ8WXG6 1647 aa14.92□□□□□ -0.02
GABRB3-213ENST00000557765 DCAF11Q8TEB1 546 aa14.92□□□□□ -0.02
GABRB3-213ENST00000557765 GPRASP1Q5JY77 1395 aa14.92□□□□□ -0.02
GABRB3-213ENST00000557765 IFT172Q9UG01 1749 aa14.92□□□□□ -0.02
GABRB3-213ENST00000557765 UGGT1Q9NYU2 1555 aa14.9□□□□□ -0.02
GABRB3-213ENST00000557765 STAG3Q9UJ98 1225 aa14.9□□□□□ -0.02
GABRB3-213ENST00000557765 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
GABRB3-213ENST00000557765 THEMISQ8N1K5 641 aaPredicted RBP14.89□□□□□ -0.03
GABRB3-213ENST00000557765 SETBP1Q9Y6X0 1596 aa14.88□□□□□ -0.03
GABRB3-213ENST00000557765 PPLO60437 1756 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms