RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 RICTORQ6R327 1708 aa13.82□□□□□ -0.2
RD3L-201ENST00000557640 MMRN1Q13201 1228 aa13.82□□□□□ -0.2
RD3L-201ENST00000557640 SPNS2Q8IVW8 549 aa13.82□□□□□ -0.2
RD3L-201ENST00000557640 KCNH8Q96L42 1107 aa13.82□□□□□ -0.2
RD3L-201ENST00000557640 ARHGEF40Q8TER5 1519 aa13.81□□□□□ -0.2
RD3L-201ENST00000557640 MARVELD3Q96A59 401 aa13.81□□□□□ -0.2
RD3L-201ENST00000557640 PCDHB8Q9UN66 801 aa13.81□□□□□ -0.2
RD3L-201ENST00000557640 RIMS1Q86UR5 1692 aaKnown RBP13.81□□□□□ -0.2
RD3L-201ENST00000557640 ARID3CA6NKF2 412 aa13.8□□□□□ -0.2
RD3L-201ENST00000557640 PCF11O94913 1555 aaKnown RBP13.79□□□□□ -0.2
RD3L-201ENST00000557640 LMTK3Q96Q04 1460 aa13.78□□□□□ -0.2
RD3L-201ENST00000557640 NUP153P49790 1475 aaKnown RBP13.76□□□□□ -0.21
RD3L-201ENST00000557640 TTC37Q6PGP7 1564 aa13.75□□□□□ -0.21
RD3L-201ENST00000557640 FKBP8Q14318 412 aa13.75□□□□□ -0.21
RD3L-201ENST00000557640 NEO1Q92859 1461 aa13.74□□□□□ -0.21
RD3L-201ENST00000557640 RAPGEF3O95398 923 aa13.72□□□□□ -0.21
RD3L-201ENST00000557640 P3H3Q8IVL6 736 aa13.72□□□□□ -0.21
RD3L-201ENST00000557640 GOLGA2Q08379 1002 aa13.71□□□□□ -0.21
RD3L-201ENST00000557640 ZMYM4Q5VZL5 1548 aa13.7□□□□□ -0.22
RD3L-201ENST00000557640 C3orf67Q6ZVT6 689 aa13.7□□□□□ -0.22
RD3L-201ENST00000557640 FER1L4A9Z1Z3 1794 aa13.69□□□□□ -0.22
RD3L-201ENST00000557640 FBXO41Q8TF61 875 aa13.69□□□□□ -0.22
RD3L-201ENST00000557640 FHOD3Q2V2M9 1422 aa13.69□□□□□ -0.22
RD3L-201ENST00000557640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.69□□□□□ -0.22
RD3L-201ENST00000557640 CFAP74Q9C0B2 1584 aa13.68□□□□□ -0.22
RD3L-201ENST00000557640 MKRN3Q13064 507 aaKnown RBP13.67□□□□□ -0.22
RD3L-201ENST00000557640 EMP3P54852 163 aa13.66□□□□□ -0.22
RD3L-201ENST00000557640 L3MBTL3Q96JM7 780 aaPredicted RBP13.66□□□□□ -0.22
RD3L-201ENST00000557640 YEATS2Q9ULM3 1422 aa13.65□□□□□ -0.22
RD3L-201ENST00000557640 PHLDB1Q86UU1 1377 aa13.65□□□□□ -0.22
RD3L-201ENST00000557640 CDK13Q14004 1512 aaKnown RBP13.64□□□□□ -0.23
RD3L-201ENST00000557640 ZFYVE16Q7Z3T8 1539 aa13.64□□□□□ -0.23
RD3L-201ENST00000557640 HECW1Q76N89 1606 aa13.64□□□□□ -0.23
RD3L-201ENST00000557640 PDCD7Q8N8D1 485 aaKnown RBP13.64□□□□□ -0.23
RD3L-201ENST00000557640 FANCAO15360 1455 aa13.63□□□□□ -0.23
RD3L-201ENST00000557640 DENND4BO75064 1496 aaPredicted RBP13.63□□□□□ -0.23
RD3L-201ENST00000557640 ZNF467Q7Z7K2 595 aaPredicted RBP13.63□□□□□ -0.23
RD3L-201ENST00000557640 EFCAB5A4FU69 1503 aa13.61□□□□□ -0.23
RD3L-201ENST00000557640 KLHL34Q8N239 644 aa13.61□□□□□ -0.23
RD3L-201ENST00000557640 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
RD3L-201ENST00000557640 AKNAQ7Z591 1439 aa13.61□□□□□ -0.23
RD3L-201ENST00000557640 LRRIQ1Q96JM4 1722 aa13.61□□□□□ -0.23
RD3L-201ENST00000557640 GSE1Q14687 1217 aa13.6□□□□□ -0.23
RD3L-201ENST00000557640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.6□□□□□ -0.23
RD3L-201ENST00000557640 PREX1Q8TCU6 1659 aa13.59□□□□□ -0.23
RD3L-201ENST00000557640 HSPA2P54652 639 aa13.59□□□□□ -0.23
RD3L-201ENST00000557640 KIF14Q15058 1648 aa13.59□□□□□ -0.23
RD3L-201ENST00000557640 MYO5CQ9NQX4 1742 aa13.59□□□□□ -0.23
RD3L-201ENST00000557640 STRCQ7RTU9 1775 aa13.58□□□□□ -0.23
RD3L-201ENST00000557640 ARHGEF12Q9NZN5 1544 aa13.58□□□□□ -0.24
RD3L-201ENST00000557640 POGZQ7Z3K3 1410 aa13.57□□□□□ -0.24
RD3L-201ENST00000557640 FAM205CA6NFA0 338 aa13.57□□□□□ -0.24
RD3L-201ENST00000557640 ARID4BQ4LE39 1312 aaPredicted RBP13.57□□□□□ -0.24
RD3L-201ENST00000557640 HS3ST6Q96QI5 342 aa13.56□□□□□ -0.24
RD3L-201ENST00000557640 RANGAP1P46060 587 aaPredicted RBP13.53□□□□□ -0.24
RD3L-201ENST00000557640 PSEN1P49768 467 aa13.53□□□□□ -0.24
RD3L-201ENST00000557640 POTEB3A0JP26 581 aa13.52□□□□□ -0.25
RD3L-201ENST00000557640 POTEBQ6S5H4 581 aa13.52□□□□□ -0.25
RD3L-201ENST00000557640 MAGI2Q86UL8 1455 aa13.52□□□□□ -0.25
RD3L-201ENST00000557640 KDM5CP41229 1560 aa13.52□□□□□ -0.25
RD3L-201ENST00000557640 DIP2CQ9Y2E4 1556 aa13.52□□□□□ -0.25
RD3L-201ENST00000557640 ABCA6Q8N139 1617 aa13.52□□□□□ -0.25
RD3L-201ENST00000557640 C3P01024 1663 aa13.5□□□□□ -0.25
RD3L-201ENST00000557640 KRTAP3-3Q9BYR6 98 aa13.5□□□□□ -0.25
RD3L-201ENST00000557640 KRTAP3-2Q9BYR7 98 aa13.5□□□□□ -0.25
RD3L-201ENST00000557640 CDC42BPBQ9Y5S2 1711 aa13.5□□□□□ -0.25
RD3L-201ENST00000557640 SCAPERQ9BY12 1400 aa13.49□□□□□ -0.25
RD3L-201ENST00000557640 CHRM1P11229 460 aaPredicted RBP13.49□□□□□ -0.25
RD3L-201ENST00000557640 PLCH2O75038 1416 aa13.48□□□□□ -0.25
RD3L-201ENST00000557640 C9orf84Q5VXU9 1444 aa13.48□□□□□ -0.25
RD3L-201ENST00000557640 EEA1Q15075 1411 aa13.47□□□□□ -0.25
RD3L-201ENST00000557640 G3V3G9 751 aa13.47□□□□□ -0.25
RD3L-201ENST00000557640 ATP10AO60312 1499 aa13.47□□□□□ -0.25
RD3L-201ENST00000557640 ITSN2Q9NZM3 1697 aa13.47□□□□□ -0.25
RD3L-201ENST00000557640 MLECQ14165 292 aa13.46□□□□□ -0.25
RD3L-201ENST00000557640 ARHGAP35Q9NRY4 1499 aa13.46□□□□□ -0.25
RD3L-201ENST00000557640 PREX2Q70Z35 1606 aa13.46□□□□□ -0.26
RD3L-201ENST00000557640 REREQ9P2R6 1566 aa13.45□□□□□ -0.26
RD3L-201ENST00000557640 PLEKHD1A6NEE1 506 aa13.45□□□□□ -0.26
RD3L-201ENST00000557640 DPY19L2Q6NUT2 758 aa13.45□□□□□ -0.26
RD3L-201ENST00000557640 CERKQ8TCT0 537 aa13.44□□□□□ -0.26
RD3L-201ENST00000557640 VASPP50552 380 aaPredicted RBP13.43□□□□□ -0.26
RD3L-201ENST00000557640 ABCC1P33527 1531 aa13.43□□□□□ -0.26
RD3L-201ENST00000557640 KIDINS220Q9ULH0 1771 aa13.43□□□□□ -0.26
RD3L-201ENST00000557640 ZNF518AQ6AHZ1 1483 aa13.42□□□□□ -0.26
RD3L-201ENST00000557640 CDC42BPAQ5VT25 1732 aa13.42□□□□□ -0.26
RD3L-201ENST00000557640 ARHGAP5Q13017 1502 aa13.42□□□□□ -0.26
RD3L-201ENST00000557640 SPATA31D1Q6ZQQ2 1576 aa13.41□□□□□ -0.26
RD3L-201ENST00000557640 CEBPAP49715 358 aaPredicted RBP13.41□□□□□ -0.26
RD3L-201ENST00000557640 PDAP1Q13442 181 aaKnown RBP13.41□□□□□ -0.26
RD3L-201ENST00000557640 LTBP4Q8N2S1 1624 aa13.4□□□□□ -0.26
RD3L-201ENST00000557640 FAM9AQ8IZU1 332 aaPredicted RBP13.4□□□□□ -0.26
RD3L-201ENST00000557640 ILDR2Q71H61 639 aa13.39□□□□□ -0.27
RD3L-201ENST00000557640 ZNF710Q8N1W2 664 aa13.39□□□□□ -0.27
RD3L-201ENST00000557640 CABP2Q9NPB3 220 aa13.39□□□□□ -0.27
RD3L-201ENST00000557640 BOLA1Q9Y3E2 137 aa13.39□□□□□ -0.27
RD3L-201ENST00000557640 TROQ12816 1431 aaPredicted RBP13.39□□□□□ -0.27
RD3L-201ENST00000557640 SETD1BQ9UPS6 1966 aaKnown RBP13.38□□□□□ -0.27
RD3L-201ENST00000557640 UHRF1BP1Q6BDS2 1440 aa13.37□□□□□ -0.27
RD3L-201ENST00000557640 TRAPPC8Q9Y2L5 1435 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms