RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ZDHHC16Q969W1 377 aa3.76□□□□□ -1.81
HIF1A-212ENST00000557538 PDE4DQ08499 809 aa3.76□□□□□ -1.81
HIF1A-212ENST00000557538 UPF1Q92900 1129 aaKnown RBP eCLIP3.76□□□□□ -1.81
HIF1A-212ENST00000557538 BCL2L12Q9HB09 334 aa3.76□□□□□ -1.81
HIF1A-212ENST00000557538 OTUD5Q96G74 571 aa3.76□□□□□ -1.81
HIF1A-212ENST00000557538 GRXCR2A6NFK2 248 aa3.75□□□□□ -1.81
HIF1A-212ENST00000557538 OATP04181 439 aa3.75□□□□□ -1.81
HIF1A-212ENST00000557538 C6orf132Q5T0Z8 1188 aa3.75□□□□□ -1.81
HIF1A-212ENST00000557538 TUSC1Q2TAM9 212 aa3.74□□□□□ -1.81
HIF1A-212ENST00000557538 DDX12PQ92771 950 aa3.74□□□□□ -1.81
HIF1A-212ENST00000557538 CCDC102AQ96A19 550 aa3.74□□□□□ -1.81
HIF1A-212ENST00000557538 PPP4R3BQ5MIZ7 849 aa3.74□□□□□ -1.81
HIF1A-212ENST00000557538 PRSS12P56730 875 aa3.74□□□□□ -1.81
HIF1A-212ENST00000557538 ARSIQ5FYB1 569 aa3.74□□□□□ -1.81
HIF1A-212ENST00000557538 NUTM2FA1L443 756 aa3.73□□□□□ -1.81
HIF1A-212ENST00000557538 PPP1R3GB7ZBB8 358 aa3.73□□□□□ -1.81
HIF1A-212ENST00000557538 KDM4CQ9H3R0 1056 aa3.73□□□□□ -1.81
HIF1A-212ENST00000557538 ADGRG1Q9Y653 693 aa3.73□□□□□ -1.81
HIF1A-212ENST00000557538 PBX2P40425 430 aa3.73□□□□□ -1.81
HIF1A-212ENST00000557538 EYA1Q99502 592 aa3.73□□□□□ -1.81
HIF1A-212ENST00000557538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.72□□□□□ -1.81
HIF1A-212ENST00000557538 KRI1Q8N9T8 703 aaKnown RBP3.72□□□□□ -1.81
HIF1A-212ENST00000557538 DDRGK1Q96HY6 314 aa3.72□□□□□ -1.81
HIF1A-212ENST00000557538 SOCS7O14512 581 aa3.72□□□□□ -1.81
HIF1A-212ENST00000557538 ADAM33Q9BZ11 813 aa3.72□□□□□ -1.81
HIF1A-212ENST00000557538 LHX6Q9UPM6 363 aa3.72□□□□□ -1.81
HIF1A-212ENST00000557538 GJA5P36382 358 aa3.72□□□□□ -1.81
HIF1A-212ENST00000557538 CDHR5Q9HBB8 845 aa3.72□□□□□ -1.81
HIF1A-212ENST00000557538 FECHP22830 423 aa3.71□□□□□ -1.82
HIF1A-212ENST00000557538 PXYLP1Q8TE99 480 aa3.71□□□□□ -1.82
HIF1A-212ENST00000557538 GTF3C3Q9Y5Q9 886 aa3.71□□□□□ -1.82
HIF1A-212ENST00000557538 CLCN1P35523 988 aa3.71□□□□□ -1.82
HIF1A-212ENST00000557538 NEUROD2Q15784 382 aa3.71□□□□□ -1.82
HIF1A-212ENST00000557538 PARP9Q8IXQ6 854 aa3.71□□□□□ -1.82
HIF1A-212ENST00000557538 PLEKHG3A1L390 1219 aa3.71□□□□□ -1.82
HIF1A-212ENST00000557538 TSR1Q2NL82 804 aaKnown RBP3.71□□□□□ -1.82
HIF1A-212ENST00000557538 MAP3K7O43318 606 aa3.7□□□□□ -1.82
HIF1A-212ENST00000557538 NUDT7P0C024 238 aa3.7□□□□□ -1.82
HIF1A-212ENST00000557538 METTL3Q86U44 580 aaKnown RBP3.7□□□□□ -1.82
HIF1A-212ENST00000557538 ZNF710Q8N1W2 664 aa3.7□□□□□ -1.82
HIF1A-212ENST00000557538 ZNF454Q8N9F8 522 aa3.7□□□□□ -1.82
HIF1A-212ENST00000557538 PTPREP23469 700 aa3.69□□□□□ -1.82
HIF1A-212ENST00000557538 GPCPD1Q9NPB8 672 aa3.69□□□□□ -1.82
HIF1A-212ENST00000557538 TRIM6-TRIM34B2RNG4 842 aa3.69□□□□□ -1.82
HIF1A-212ENST00000557538 TK2O00142 265 aa3.69□□□□□ -1.82
HIF1A-212ENST00000557538 CDCA7LQ96GN5 454 aa3.69□□□□□ -1.82
HIF1A-212ENST00000557538 FAM217BQ9NTX9 383 aaPredicted RBP3.69□□□□□ -1.82
HIF1A-212ENST00000557538 COL9A1P20849 921 aa3.69□□□□□ -1.82
HIF1A-212ENST00000557538 SH3D19Q5HYK7 790 aa3.69□□□□□ -1.82
HIF1A-212ENST00000557538 PADI6Q6TGC4 694 aa3.69□□□□□ -1.82
HIF1A-212ENST00000557538 LAPTM4BQ86VI4 370 aa3.69□□□□□ -1.82
HIF1A-212ENST00000557538 KHSRPQ92945 711 aaKnown RBP eCLIP3.69□□□□□ -1.824e-10■■■□□ 16.5
HIF1A-212ENST00000557538 ZNF687Q8N1G0 1237 aa3.68□□□□□ -1.82
HIF1A-212ENST00000557538 RBM46Q8TBY0 533 aaKnown RBP3.68□□□□□ -1.82
HIF1A-212ENST00000557538 PHOX2BQ99453 314 aa3.68□□□□□ -1.82
HIF1A-212ENST00000557538 ZBED2Q9BTP6 218 aa3.68□□□□□ -1.82
HIF1A-212ENST00000557538 FAM198AQ9UFP1 575 aa3.68□□□□□ -1.82
HIF1A-212ENST00000557538 ARHGAP33O14559 1287 aa3.67□□□□□ -1.82
HIF1A-212ENST00000557538 DIXDC1Q155Q3 683 aa3.67□□□□□ -1.82
HIF1A-212ENST00000557538 BHMG1C9JSJ3 638 aaPredicted RBP3.67□□□□□ -1.82
HIF1A-212ENST00000557538 GIGYF2Q6Y7W6 1299 aaKnown RBP3.67□□□□□ -1.82
HIF1A-212ENST00000557538 RSPH6AQ9H0K4 717 aa3.67□□□□□ -1.82
HIF1A-212ENST00000557538 NBPF26B4DH59 902 aa3.67□□□□□ -1.82
HIF1A-212ENST00000557538 PACS2Q86VP3 889 aa3.67□□□□□ -1.82
HIF1A-212ENST00000557538 REPIN1Q9BWE0 567 aaKnown RBP3.67□□□□□ -1.82
HIF1A-212ENST00000557538 TSKSQ9UJT2 592 aa3.67□□□□□ -1.82
HIF1A-212ENST00000557538 MS4A1P11836 297 aa3.66□□□□□ -1.82
HIF1A-212ENST00000557538 SKIV2LQ15477 1246 aaKnown RBP3.66□□□□□ -1.82
HIF1A-212ENST00000557538 LCE2DQ5TA82 110 aaPredicted RBP3.66□□□□□ -1.82
HIF1A-212ENST00000557538 RBM33Q96EV2 1170 aaKnown RBP3.66□□□□□ -1.82
HIF1A-212ENST00000557538 FAM117AQ9C073 453 aa3.66□□□□□ -1.82
HIF1A-212ENST00000557538 TMEM134Q9H6X4 195 aa3.66□□□□□ -1.82
HIF1A-212ENST00000557538 RABGEF1Q9UJ41 708 aa3.66□□□□□ -1.82
HIF1A-212ENST00000557538 CD46P15529 392 aa3.65□□□□□ -1.82
HIF1A-212ENST00000557538 TATDN2Q93075 761 aa3.65□□□□□ -1.82
HIF1A-212ENST00000557538 GPBP1L1Q9HC44 474 aaPredicted RBP3.65□□□□□ -1.82
HIF1A-212ENST00000557538 ST18O60284 1047 aa3.65□□□□□ -1.83
HIF1A-212ENST00000557538 DNAJB2P25686 324 aa3.65□□□□□ -1.83
HIF1A-212ENST00000557538 PPP2R2DQ66LE6 453 aa3.65□□□□□ -1.83
HIF1A-212ENST00000557538 SSTR3P32745 418 aaPredicted RBP3.65□□□□□ -1.83
HIF1A-212ENST00000557538 POTEEQ6S8J3 1075 aa3.65□□□□□ -1.83
HIF1A-212ENST00000557538 SULF1Q8IWU6 871 aa3.64□□□□□ -1.83
HIF1A-212ENST00000557538 BANK1Q8NDB2 785 aa3.64□□□□□ -1.83
HIF1A-212ENST00000557538 VPS9D1Q9Y2B5 631 aa3.64□□□□□ -1.83
HIF1A-212ENST00000557538 RCCD1A6NED2 376 aa3.63□□□□□ -1.83
HIF1A-212ENST00000557538 SPTLC1O15269 473 aa3.63□□□□□ -1.83
HIF1A-212ENST00000557538 USP46P62068 366 aa3.63□□□□□ -1.83
HIF1A-212ENST00000557538 NECTIN2Q92692 538 aa3.63□□□□□ -1.83
HIF1A-212ENST00000557538 HRO43593 1189 aa3.63□□□□□ -1.83
HIF1A-212ENST00000557538 FLIIQ13045 1269 aa3.63□□□□□ -1.83
HIF1A-212ENST00000557538 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.63□□□□□ -1.83
HIF1A-212ENST00000557538 PRPF38BQ5VTL8 546 aaKnown RBP3.63□□□□□ -1.83
HIF1A-212ENST00000557538 KCNH8Q96L42 1107 aa3.63□□□□□ -1.83
HIF1A-212ENST00000557538 C3orf80F5H4A9 247 aa3.62□□□□□ -1.83
HIF1A-212ENST00000557538 NUDT18Q6ZVK8 323 aa3.62□□□□□ -1.83
HIF1A-212ENST00000557538 ERBB3P21860 1342 aa3.62□□□□□ -1.83
HIF1A-212ENST00000557538 MDM2Q00987 491 aaPredicted RBP3.61□□□□□ -1.83
HIF1A-212ENST00000557538 FAM98CQ17RN3 349 aaKnown RBP3.61□□□□□ -1.83
HIF1A-212ENST00000557538 IL27Q8NEV9 243 aa3.61□□□□□ -1.83
HIF1A-212ENST00000557538 PCMTD1Q96MG8 357 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms