RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 NCOA1Q15788 1441 aa16.73■□□□□ 0.27
PSMC6-215ENST00000557517 LRRC9Q6ZRR7 1453 aa16.73■□□□□ 0.27
PSMC6-215ENST00000557517 CNTLNQ9NXG0 1405 aa16.72■□□□□ 0.27
PSMC6-215ENST00000557517 MAP3K1Q13233 1512 aa16.72■□□□□ 0.27
PSMC6-215ENST00000557517 A2MP01023 1474 aa16.72■□□□□ 0.27
PSMC6-215ENST00000557517 ZMYM3Q14202 1370 aa16.71■□□□□ 0.27
PSMC6-215ENST00000557517 ATP7AQ04656 1500 aa16.7■□□□□ 0.26
PSMC6-215ENST00000557517 DHX29Q7Z478 1369 aaKnown RBP16.7■□□□□ 0.26
PSMC6-215ENST00000557517 TSPY4P0CV99 314 aa16.69■□□□□ 0.26
PSMC6-215ENST00000557517 TSPY10P0CW01 314 aa16.69■□□□□ 0.26
PSMC6-215ENST00000557517 GGT6Q6P531 493 aa16.69■□□□□ 0.26
PSMC6-215ENST00000557517 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
PSMC6-215ENST00000557517 INO80Q9ULG1 1556 aaPredicted RBP16.67■□□□□ 0.26
PSMC6-215ENST00000557517 MROH2AA6NES4 1674 aa16.66■□□□□ 0.26
PSMC6-215ENST00000557517 PLXNC1O60486 1568 aa16.65■□□□□ 0.26
PSMC6-215ENST00000557517 NPATQ14207 1427 aa16.65■□□□□ 0.26
PSMC6-215ENST00000557517 CCDC141Q6ZP82 1450 aa16.65■□□□□ 0.26
PSMC6-215ENST00000557517 MIA2Q96PC5 1412 aa16.64■□□□□ 0.25
PSMC6-215ENST00000557517 CAMSAP1Q5T5Y3 1602 aa16.64■□□□□ 0.25
PSMC6-215ENST00000557517 APLP2Q06481 763 aa16.64■□□□□ 0.25
PSMC6-215ENST00000557517 CAMSAP2Q08AD1 1489 aa16.64■□□□□ 0.25
PSMC6-215ENST00000557517 SUPT6HQ7KZ85 1726 aaKnown RBP16.63■□□□□ 0.25
PSMC6-215ENST00000557517 KIF3BO15066 747 aa16.63■□□□□ 0.25
PSMC6-215ENST00000557517 DSG3P32926 999 aa16.61■□□□□ 0.25
PSMC6-215ENST00000557517 ZNF142P52746 1687 aaPredicted RBP16.61■□□□□ 0.25
PSMC6-215ENST00000557517 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
PSMC6-215ENST00000557517 MYOM3Q5VTT5 1437 aa16.6■□□□□ 0.25
PSMC6-215ENST00000557517 PLA2R1Q13018 1463 aa16.59■□□□□ 0.25
PSMC6-215ENST00000557517 PTPRKQ15262 1439 aa16.58■□□□□ 0.24
PSMC6-215ENST00000557517 ARHGEF5Q12774 1597 aa16.58■□□□□ 0.24
PSMC6-215ENST00000557517 ZNF335Q9H4Z2 1342 aaPredicted RBP16.57■□□□□ 0.24
PSMC6-215ENST00000557517 MYO3AQ8NEV4 1616 aa16.56■□□□□ 0.24
PSMC6-215ENST00000557517 TCOF1Q13428 1488 aaKnown RBP16.56■□□□□ 0.24
PSMC6-215ENST00000557517 WASHC2CQ9Y4E1 1318 aa16.56■□□□□ 0.24
PSMC6-215ENST00000557517 ADGBQ8N7X0 1667 aa16.54■□□□□ 0.24
PSMC6-215ENST00000557517 UBAP1LF5GYI3 381 aa16.54■□□□□ 0.24
PSMC6-215ENST00000557517 FBXO31Q5XUX0 539 aaPredicted RBP16.54■□□□□ 0.24
PSMC6-215ENST00000557517 CEP170BQ9Y4F5 1589 aaPredicted RBP16.54■□□□□ 0.24
PSMC6-215ENST00000557517 NCKAP5LQ9HCH0 1330 aa16.53■□□□□ 0.24
PSMC6-215ENST00000557517 PKD2Q13563 968 aa16.53■□□□□ 0.24
PSMC6-215ENST00000557517 CLTCQ00610 1675 aaKnown RBP16.52■□□□□ 0.23
PSMC6-215ENST00000557517 ABCC5O15440 1437 aa16.5■□□□□ 0.23
PSMC6-215ENST00000557517 MAST1Q9Y2H9 1570 aa16.49■□□□□ 0.23
PSMC6-215ENST00000557517 MED1Q15648 1581 aaPredicted RBP16.48■□□□□ 0.23
PSMC6-215ENST00000557517 FAM135AQ9P2D6 1515 aa16.48■□□□□ 0.23
PSMC6-215ENST00000557517 RRP7BPQ9NSQ0 103 aa16.47■□□□□ 0.23
PSMC6-215ENST00000557517 FGD6Q6ZV73 1430 aa16.46■□□□□ 0.23
PSMC6-215ENST00000557517 PZPP20742 1482 aa16.46■□□□□ 0.23
PSMC6-215ENST00000557517 TNRQ92752 1358 aa16.45■□□□□ 0.22
PSMC6-215ENST00000557517 KDM5DQ9BY66 1539 aa16.45■□□□□ 0.22
PSMC6-215ENST00000557517 A2ML1A8K2U0 1454 aa16.44■□□□□ 0.22
PSMC6-215ENST00000557517 DNMT1P26358 1616 aaKnown RBP16.44■□□□□ 0.22
PSMC6-215ENST00000557517 KIF15Q9NS87 1388 aa16.43■□□□□ 0.22
PSMC6-215ENST00000557517 THEMISQ8N1K5 641 aaPredicted RBP16.43■□□□□ 0.22
PSMC6-215ENST00000557517 CPS1P31327 1500 aa16.43■□□□□ 0.22
PSMC6-215ENST00000557517 DAPK1P53355 1430 aa16.43■□□□□ 0.22
PSMC6-215ENST00000557517 SHANK2Q9UPX8 1470 aa16.42■□□□□ 0.22
PSMC6-215ENST00000557517 POLR1AO95602 1720 aaPredicted RBP16.42■□□□□ 0.22
PSMC6-215ENST00000557517 DUOX2Q9NRD8 1548 aa16.42■□□□□ 0.22
PSMC6-215ENST00000557517 HSPA1LP34931 641 aa16.42■□□□□ 0.22
PSMC6-215ENST00000557517 NEURL4Q96JN8 1562 aa16.42■□□□□ 0.22
PSMC6-215ENST00000557517 CHIC2Q9UKJ5 165 aa16.4■□□□□ 0.22
PSMC6-215ENST00000557517 ANKRD30AQ9BXX3 1397 aa16.39■□□□□ 0.21
PSMC6-215ENST00000557517 ERBINQ96RT1 1412 aa16.39■□□□□ 0.21
PSMC6-215ENST00000557517 PTPN23Q9H3S7 1636 aa16.39■□□□□ 0.21
PSMC6-215ENST00000557517 ANKLE2Q86XL3 938 aa16.39■□□□□ 0.21
PSMC6-215ENST00000557517 ZNF219Q9P2Y4 722 aaPredicted RBP16.39■□□□□ 0.21
PSMC6-215ENST00000557517 NLRP1Q9C000 1473 aa16.38■□□□□ 0.21
PSMC6-215ENST00000557517 ABCC3O15438 1527 aa16.38■□□□□ 0.21
PSMC6-215ENST00000557517 RNF17Q9BXT8 1623 aaKnown RBP16.37■□□□□ 0.21
PSMC6-215ENST00000557517 ALKQ9UM73 1620 aa16.37■□□□□ 0.21
PSMC6-215ENST00000557517 ARHGAP31Q2M1Z3 1444 aa16.36■□□□□ 0.21
PSMC6-215ENST00000557517 TOM1O60784 492 aa16.36■□□□□ 0.21
PSMC6-215ENST00000557517 FAM50AQ14320 339 aaKnown RBP16.36■□□□□ 0.21
PSMC6-215ENST00000557517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.36■□□□□ 0.21
PSMC6-215ENST00000557517 VWDEQ8N2E2 1590 aa16.35■□□□□ 0.21
PSMC6-215ENST00000557517 EIF2AK4Q9P2K8 1649 aaKnown RBP16.35■□□□□ 0.21
PSMC6-215ENST00000557517 MROH1Q8NDA8 1641 aa16.34■□□□□ 0.21
PSMC6-215ENST00000557517 PIP4K2BP78356 416 aa16.33■□□□□ 0.2
PSMC6-215ENST00000557517 ERVK-7P63135 1459 aa16.32■□□□□ 0.2
PSMC6-215ENST00000557517 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
PSMC6-215ENST00000557517 DEPDC5O75140 1603 aa16.31■□□□□ 0.2
PSMC6-215ENST00000557517 MED14O60244 1454 aa16.31■□□□□ 0.2
PSMC6-215ENST00000557517 ADGRL2O95490 1459 aa16.31■□□□□ 0.2
PSMC6-215ENST00000557517 KANK1Q14678 1352 aa16.31■□□□□ 0.2
PSMC6-215ENST00000557517 ABCB7O75027 752 aa16.31■□□□□ 0.2
PSMC6-215ENST00000557517 UGGT1Q9NYU2 1555 aa16.3■□□□□ 0.2
PSMC6-215ENST00000557517 PRDM15P57071 1507 aaPredicted RBP16.29■□□□□ 0.2
PSMC6-215ENST00000557517 ZC3H13Q5T200 1668 aaKnown RBP16.27■□□□□ 0.2
PSMC6-215ENST00000557517 IDI1Q13907 227 aa16.27■□□□□ 0.2
PSMC6-215ENST00000557517 ANKRD50Q9ULJ7 1429 aa16.27■□□□□ 0.19
PSMC6-215ENST00000557517 LMTK2Q8IWU2 1503 aa16.26■□□□□ 0.19
PSMC6-215ENST00000557517 NPHP4O75161 1426 aaPredicted RBP16.26■□□□□ 0.19
PSMC6-215ENST00000557517 STRCP1A6NGW2 1772 aa16.26■□□□□ 0.19
PSMC6-215ENST00000557517 CROCC2H7BZ55 1655 aa16.25■□□□□ 0.19
PSMC6-215ENST00000557517 LTKP29376 864 aa16.25■□□□□ 0.19
PSMC6-215ENST00000557517 ROCK1Q13464 1354 aa16.25■□□□□ 0.19
PSMC6-215ENST00000557517 IQGAP1P46940 1657 aa16.24■□□□□ 0.19
PSMC6-215ENST00000557517 TXNDC2Q86VQ3 553 aa16.24■□□□□ 0.19
PSMC6-215ENST00000557517 SLC52A1Q9NWF4 448 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms