RNA–Protein interactions for RNA: ENST00000557489.5

LRMP-220, Transcript of lymphoid restricted membrane protein, humanhuman

TSL 1 (best)

Gene LRMP, Length 1,253 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMP-220ENST00000557489 DIP2CQ9Y2E4 1556 aa9.65□□□□□ -0.86
LRMP-220ENST00000557489 NUP153P49790 1475 aaKnown RBP9.65□□□□□ -0.87
LRMP-220ENST00000557489 MYO5CQ9NQX4 1742 aa9.65□□□□□ -0.87
LRMP-220ENST00000557489 VPS8Q8N3P4 1428 aa9.65□□□□□ -0.87
LRMP-220ENST00000557489 KDM5CP41229 1560 aa9.64□□□□□ -0.87
LRMP-220ENST00000557489 CEP170BQ9Y4F5 1589 aaPredicted RBP9.64□□□□□ -0.87
LRMP-220ENST00000557489 SETD1AO15047 1707 aaKnown RBP9.63□□□□□ -0.87
LRMP-220ENST00000557489 POLR1AO95602 1720 aaPredicted RBP9.63□□□□□ -0.87
LRMP-220ENST00000557489 RGS17Q9UGC6 210 aaPredicted RBP9.63□□□□□ -0.87
LRMP-220ENST00000557489 SAMD9Q5K651 1589 aa9.63□□□□□ -0.87
LRMP-220ENST00000557489 P3H3Q8IVL6 736 aa9.62□□□□□ -0.87
LRMP-220ENST00000557489 PLCH2O75038 1416 aa9.62□□□□□ -0.87
LRMP-220ENST00000557489 SHANK2Q9UPX8 1470 aa9.61□□□□□ -0.87
LRMP-220ENST00000557489 ABCA6Q8N139 1617 aa9.61□□□□□ -0.87
LRMP-220ENST00000557489 RANGAP1P46060 587 aaPredicted RBP9.61□□□□□ -0.87
LRMP-220ENST00000557489 RNF17Q9BXT8 1623 aaKnown RBP9.6□□□□□ -0.87
LRMP-220ENST00000557489 SRCAPQ6ZRS2 3230 aa9.6□□□□□ -0.87
LRMP-220ENST00000557489 EFCAB2Q5VUJ9 269 aa9.59□□□□□ -0.87
LRMP-220ENST00000557489 STAG3Q9UJ98 1225 aa9.59□□□□□ -0.87
LRMP-220ENST00000557489 ALKQ9UM73 1620 aa9.59□□□□□ -0.87
LRMP-220ENST00000557489 REM2Q8IYK8 340 aaPredicted RBP9.58□□□□□ -0.88
LRMP-220ENST00000557489 ZMYM3Q14202 1370 aa9.57□□□□□ -0.88
LRMP-220ENST00000557489 MLH3Q9UHC1 1453 aa9.57□□□□□ -0.88
LRMP-220ENST00000557489 SYNMO15061 1565 aa9.56□□□□□ -0.88
LRMP-220ENST00000557489 ARHGAP35Q9NRY4 1499 aa9.56□□□□□ -0.88
LRMP-220ENST00000557489 POTEAQ6S8J7 498 aa9.56□□□□□ -0.88
LRMP-220ENST00000557489 CLTCQ00610 1675 aaKnown RBP9.55□□□□□ -0.88
LRMP-220ENST00000557489 SPDYE1Q8NFV5 336 aaPredicted RBP9.55□□□□□ -0.88
LRMP-220ENST00000557489 ARHGAP5Q13017 1502 aa9.55□□□□□ -0.88
LRMP-220ENST00000557489 VWDEQ8N2E2 1590 aa9.54□□□□□ -0.88
LRMP-220ENST00000557489 NEURL4Q96JN8 1562 aa9.54□□□□□ -0.88
LRMP-220ENST00000557489 DNMT1P26358 1616 aaKnown RBP9.54□□□□□ -0.88
LRMP-220ENST00000557489 VASPP50552 380 aaPredicted RBP9.54□□□□□ -0.88
LRMP-220ENST00000557489 PPARGC1BQ86YN6 1023 aaKnown RBP9.54□□□□□ -0.88
LRMP-220ENST00000557489 AFAP1Q8N556 730 aa9.54□□□□□ -0.88
LRMP-220ENST00000557489 A2ML1A8K2U0 1454 aa9.53□□□□□ -0.88
LRMP-220ENST00000557489 KIF14Q15058 1648 aa9.53□□□□□ -0.88
LRMP-220ENST00000557489 UPF1Q92900 1129 aaKnown RBP eCLIP9.52□□□□□ -0.89
LRMP-220ENST00000557489 KIDINS220Q9ULH0 1771 aa9.5□□□□□ -0.89
LRMP-220ENST00000557489 ITSN2Q9NZM3 1697 aa9.5□□□□□ -0.89
LRMP-220ENST00000557489 DEPDC5O75140 1603 aa9.49□□□□□ -0.89
LRMP-220ENST00000557489 IQGAP1P46940 1657 aa9.49□□□□□ -0.89
LRMP-220ENST00000557489 FMN1Q68DA7 1419 aa9.48□□□□□ -0.89
LRMP-220ENST00000557489 ABCC1P33527 1531 aa9.48□□□□□ -0.89
LRMP-220ENST00000557489 MAP3K1Q13233 1512 aa9.48□□□□□ -0.89
LRMP-220ENST00000557489 CDK13Q14004 1512 aaKnown RBP9.48□□□□□ -0.89
LRMP-220ENST00000557489 LRRC7Q96NW7 1537 aa9.48□□□□□ -0.89
LRMP-220ENST00000557489 PITPNM1O00562 1244 aa9.48□□□□□ -0.89
LRMP-220ENST00000557489 HRCP23327 699 aa9.48□□□□□ -0.89
LRMP-220ENST00000557489 ANKLE2Q86XL3 938 aa9.47□□□□□ -0.89
LRMP-220ENST00000557489 CDK11AQ9UQ88 783 aaPredicted RBP9.47□□□□□ -0.89
LRMP-220ENST00000557489 NPHP4O75161 1426 aaPredicted RBP9.47□□□□□ -0.89
LRMP-220ENST00000557489 FYCO1Q9BQS8 1478 aa9.47□□□□□ -0.89
LRMP-220ENST00000557489 STRCP1A6NGW2 1772 aa9.46□□□□□ -0.9
LRMP-220ENST00000557489 MED14O60244 1454 aa9.46□□□□□ -0.9
LRMP-220ENST00000557489 TIAM1Q13009 1591 aa9.46□□□□□ -0.9
LRMP-220ENST00000557489 CDC42BPBQ9Y5S2 1711 aa9.45□□□□□ -0.9
LRMP-220ENST00000557489 CLEC11AQ9Y240 323 aa9.44□□□□□ -0.9
LRMP-220ENST00000557489 FAM135BQ49AJ0 1406 aa9.44□□□□□ -0.9
LRMP-220ENST00000557489 CASKIN1Q8WXD9 1431 aa9.44□□□□□ -0.9
LRMP-220ENST00000557489 PREX2Q70Z35 1606 aa9.44□□□□□ -0.9
LRMP-220ENST00000557489 PLXNC1O60486 1568 aa9.43□□□□□ -0.9
LRMP-220ENST00000557489 FAM135AQ9P2D6 1515 aa9.43□□□□□ -0.9
LRMP-220ENST00000557489 ZEB1P37275 1124 aaPredicted RBP9.43□□□□□ -0.9
LRMP-220ENST00000557489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.42□□□□□ -0.9
LRMP-220ENST00000557489 ZNF772Q68DY9 489 aaPredicted RBP9.42□□□□□ -0.9
LRMP-220ENST00000557489 THEMISQ8N1K5 641 aaPredicted RBP9.42□□□□□ -0.9
LRMP-220ENST00000557489 TRIM52Q96A61 297 aa9.42□□□□□ -0.9
LRMP-220ENST00000557489 ROBO1Q9Y6N7 1651 aa9.42□□□□□ -0.9
LRMP-220ENST00000557489 TNRQ92752 1358 aa9.41□□□□□ -0.9
LRMP-220ENST00000557489 SAMD9LQ8IVG5 1584 aa9.41□□□□□ -0.9
LRMP-220ENST00000557489 UGGT1Q9NYU2 1555 aa9.41□□□□□ -0.9
LRMP-220ENST00000557489 TROQ12816 1431 aaPredicted RBP9.4□□□□□ -0.9
LRMP-220ENST00000557489 PRR29P0C7W0 189 aa9.4□□□□□ -0.9
LRMP-220ENST00000557489 IFNLR1Q8IU57 520 aaPredicted RBP9.4□□□□□ -0.9
LRMP-220ENST00000557489 ATP1B4Q9UN42 357 aaPredicted RBP9.4□□□□□ -0.9
LRMP-220ENST00000557489 XIRP1Q702N8 1843 aaKnown RBP9.4□□□□□ -0.91
LRMP-220ENST00000557489 A2MP01023 1474 aa9.4□□□□□ -0.91
LRMP-220ENST00000557489 LRRC9Q6ZRR7 1453 aa9.4□□□□□ -0.91
LRMP-220ENST00000557489 NLRP1Q9C000 1473 aa9.4□□□□□ -0.91
LRMP-220ENST00000557489 CDK12Q9NYV4 1490 aaPredicted RBP9.4□□□□□ -0.91
LRMP-220ENST00000557489 GGT6Q6P531 493 aa9.39□□□□□ -0.91
LRMP-220ENST00000557489 PLCD3Q8N3E9 789 aa9.39□□□□□ -0.91
LRMP-220ENST00000557489 ATP7AQ04656 1500 aa9.39□□□□□ -0.91
LRMP-220ENST00000557489 KDM5DQ9BY66 1539 aa9.39□□□□□ -0.91
LRMP-220ENST00000557489 PHLPP1O60346 1717 aa9.39□□□□□ -0.91
LRMP-220ENST00000557489 ADGBQ8N7X0 1667 aa9.39□□□□□ -0.91
LRMP-220ENST00000557489 JCADQ9P266 1359 aa9.38□□□□□ -0.91
LRMP-220ENST00000557489 SPAG9O60271 1321 aaKnown RBP9.38□□□□□ -0.91
LRMP-220ENST00000557489 MEX3CQ5U5Q3 659 aaKnown RBP9.38□□□□□ -0.91
LRMP-220ENST00000557489 MIER1Q8N108 512 aa9.38□□□□□ -0.91
LRMP-220ENST00000557489 CCDC18Q5T9S5 1454 aa9.38□□□□□ -0.91
LRMP-220ENST00000557489 ZC3H13Q5T200 1668 aaKnown RBP9.37□□□□□ -0.91
LRMP-220ENST00000557489 PZPP20742 1482 aa9.37□□□□□ -0.91
LRMP-220ENST00000557489 RXRBP28702 533 aa9.37□□□□□ -0.91
LRMP-220ENST00000557489 KANK4Q5T7N3 995 aaPredicted RBP9.37□□□□□ -0.91
LRMP-220ENST00000557489 INO80Q9ULG1 1556 aaPredicted RBP9.37□□□□□ -0.91
LRMP-220ENST00000557489 ZRANB1Q9UGI0 708 aa9.36□□□□□ -0.91
LRMP-220ENST00000557489 PLEKHG5O94827 1062 aa9.35□□□□□ -0.91
LRMP-220ENST00000557489 AMER1Q5JTC6 1135 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms