RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 ZNF454Q8N9F8 522 aa9.24□□□□□ -0.93
CHD8-212ENST00000557329 KCNV2Q8TDN2 545 aa9.23□□□□□ -0.93
CHD8-212ENST00000557329 BHMG1C9JSJ3 638 aaPredicted RBP9.22□□□□□ -0.93
CHD8-212ENST00000557329 RGS20O76081 388 aa9.22□□□□□ -0.93
CHD8-212ENST00000557329 FOSBP53539 338 aa9.22□□□□□ -0.93
CHD8-212ENST00000557329 FBXW7Q969H0 707 aa9.22□□□□□ -0.93
CHD8-212ENST00000557329 SMYD5Q6GMV2 418 aa9.21□□□□□ -0.94
CHD8-212ENST00000557329 JPH4Q96JJ6 628 aa9.21□□□□□ -0.94
CHD8-212ENST00000557329 EPAS1Q99814 870 aa9.21□□□□□ -0.94
CHD8-212ENST00000557329 PHF14O94880 888 aa9.2□□□□□ -0.94
CHD8-212ENST00000557329 PTPREP23469 700 aa9.2□□□□□ -0.94
CHD8-212ENST00000557329 PTPN5P54829 565 aa9.2□□□□□ -0.94
CHD8-212ENST00000557329 TULP1O00294 542 aaPredicted RBP9.19□□□□□ -0.94
CHD8-212ENST00000557329 THSD4Q6ZMP0 1018 aa9.18□□□□□ -0.94
CHD8-212ENST00000557329 ZBED2Q9BTP6 218 aa9.18□□□□□ -0.94
CHD8-212ENST00000557329 TYW1BQ6NUM6 668 aa9.16□□□□□ -0.94
CHD8-212ENST00000557329 MRPL50Q8N5N7 158 aaKnown RBP9.15□□□□□ -0.94
CHD8-212ENST00000557329 ZDHHC16Q969W1 377 aa9.15□□□□□ -0.94
CHD8-212ENST00000557329 GOLGA8CPA6NN73 597 aa9.14□□□□□ -0.95
CHD8-212ENST00000557329 WNT2BQ93097 391 aa9.14□□□□□ -0.95
CHD8-212ENST00000557329 NBR1Q14596 966 aa9.13□□□□□ -0.95
CHD8-212ENST00000557329 NBPF3Q9H094 633 aa9.13□□□□□ -0.95
CHD8-212ENST00000557329 A0A0G2JS52 829 aa9.12□□□□□ -0.95
CHD8-212ENST00000557329 ADAM33Q9BZ11 813 aa9.12□□□□□ -0.95
CHD8-212ENST00000557329 CERKQ8TCT0 537 aa9.1□□□□□ -0.95
CHD8-212ENST00000557329 PCDHGA10Q9Y5H3 936 aa9.09□□□□□ -0.95
CHD8-212ENST00000557329 DDX12PQ92771 950 aa9.08□□□□□ -0.96
CHD8-212ENST00000557329 IRX2Q9BZI1 471 aaPredicted RBP9.08□□□□□ -0.96
CHD8-212ENST00000557329 TESPA1A2RU30 521 aaPredicted RBP9.07□□□□□ -0.96
CHD8-212ENST00000557329 GRXCR2A6NFK2 248 aa9.07□□□□□ -0.96
CHD8-212ENST00000557329 PPP1R3GB7ZBB8 358 aa9.07□□□□□ -0.96
CHD8-212ENST00000557329 EN1Q05925 392 aaPredicted RBP9.07□□□□□ -0.96
CHD8-212ENST00000557329 RABGEF1Q9UJ41 708 aa9.06□□□□□ -0.96
CHD8-212ENST00000557329 SEMA3EO15041 775 aa9.04□□□□□ -0.96
CHD8-212ENST00000557329 ITGBL1O95965 494 aaPredicted RBP9.04□□□□□ -0.96
CHD8-212ENST00000557329 BCANQ96GW7 911 aa9.04□□□□□ -0.96
CHD8-212ENST00000557329 MAP3K7O43318 606 aa9.03□□□□□ -0.96
CHD8-212ENST00000557329 ONECUT3O60422 494 aaPredicted RBP9.03□□□□□ -0.96
CHD8-212ENST00000557329 ANKK1Q8NFD2 765 aa9.03□□□□□ -0.96
CHD8-212ENST00000557329 OSBPP22059 807 aa9.02□□□□□ -0.97
CHD8-212ENST00000557329 C6orf132Q5T0Z8 1188 aa9.02□□□□□ -0.97
CHD8-212ENST00000557329 LAPTM4BQ86VI4 370 aa9.02□□□□□ -0.97
CHD8-212ENST00000557329 NYAP1Q6ZVC0 841 aa9.01□□□□□ -0.97
CHD8-212ENST00000557329 RBM27Q9P2N5 1060 aaKnown RBP9□□□□□ -0.97
CHD8-212ENST00000557329 COL9A1P20849 921 aa8.99□□□□□ -0.97
CHD8-212ENST00000557329 PROX2Q3B8N5 592 aa8.99□□□□□ -0.97
CHD8-212ENST00000557329 SOWAHBA6NEL2 793 aa8.98□□□□□ -0.97
CHD8-212ENST00000557329 MLLT3P42568 568 aaPredicted RBP8.98□□□□□ -0.97
CHD8-212ENST00000557329 RBM33Q96EV2 1170 aaKnown RBP8.97□□□□□ -0.97
CHD8-212ENST00000557329 FCHSD2O94868 740 aa8.95□□□□□ -0.98
CHD8-212ENST00000557329 BCAMP50895 628 aa8.95□□□□□ -0.98
CHD8-212ENST00000557329 ZFRQ96KR1 1074 aaKnown RBP8.95□□□□□ -0.98
CHD8-212ENST00000557329 KIAA1468Q9P260 1216 aa8.95□□□□□ -0.98
CHD8-212ENST00000557329 NUTM2FA1L443 756 aa8.93□□□□□ -0.98
CHD8-212ENST00000557329 PACS2Q86VP3 889 aa8.93□□□□□ -0.98
CHD8-212ENST00000557329 HIC1Q14526 733 aa8.92□□□□□ -0.98
CHD8-212ENST00000557329 TRIM6-TRIM34B2RNG4 842 aa8.91□□□□□ -0.98
CHD8-212ENST00000557329 PRSS12P56730 875 aa8.91□□□□□ -0.98
CHD8-212ENST00000557329 KCNC4Q03721 635 aa8.91□□□□□ -0.98
CHD8-212ENST00000557329 GPIHBP1Q8IV16 184 aa8.91□□□□□ -0.98
CHD8-212ENST00000557329 PTGDRQ13258 359 aa8.9□□□□□ -0.98
CHD8-212ENST00000557329 TSR1Q2NL82 804 aaKnown RBP8.9□□□□□ -0.98
CHD8-212ENST00000557329 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.9□□□□□ -0.98
CHD8-212ENST00000557329 WBP1LQ9NX94 342 aa8.9□□□□□ -0.98
CHD8-212ENST00000557329 FAM98CQ17RN3 349 aaKnown RBP8.89□□□□□ -0.99
CHD8-212ENST00000557329 CDCA7LQ96GN5 454 aa8.89□□□□□ -0.99
CHD8-212ENST00000557329 NBPF26B4DH59 902 aa8.88□□□□□ -0.99
CHD8-212ENST00000557329 SEPT9Q9UHD8 586 aaPredicted RBP8.88□□□□□ -0.99
CHD8-212ENST00000557329 RBM26Q5T8P6 1007 aaKnown RBP8.87□□□□□ -0.99
CHD8-212ENST00000557329 LMOD2Q6P5Q4 547 aa8.87□□□□□ -0.99
CHD8-212ENST00000557329 TSR3Q9UJK0 312 aaKnown RBP8.87□□□□□ -0.99
CHD8-212ENST00000557329 GNPATO15228 680 aa8.86□□□□□ -0.99
CHD8-212ENST00000557329 PRIM1P49642 420 aaKnown RBP8.86□□□□□ -0.99
CHD8-212ENST00000557329 NPDC1Q9NQX5 325 aaPredicted RBP8.86□□□□□ -0.99
CHD8-212ENST00000557329 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.86□□□□□ -0.99
CHD8-212ENST00000557329 Q6ZNB5 142 aa8.85□□□□□ -0.99
CHD8-212ENST00000557329 LRCH3Q96II8 777 aa8.85□□□□□ -0.99
CHD8-212ENST00000557329 OATP04181 439 aa8.84□□□□□ -0.99
CHD8-212ENST00000557329 HDGFP51858 240 aaKnown RBP8.84□□□□□ -0.99
CHD8-212ENST00000557329 LAPTM4AQ15012 233 aa8.84□□□□□ -0.99
CHD8-212ENST00000557329 TTC13Q8NBP0 860 aa8.84□□□□□ -0.99
CHD8-212ENST00000557329 CDHR5Q9HBB8 845 aa8.84□□□□□ -0.99
CHD8-212ENST00000557329 HPS5Q9UPZ3 1129 aa8.84□□□□□ -0.99
CHD8-212ENST00000557329 SLC4A3P48751 1232 aa8.83□□□□□ -1
CHD8-212ENST00000557329 NECTIN2Q92692 538 aa8.83□□□□□ -1
CHD8-212ENST00000557329 RBM46Q8TBY0 533 aaKnown RBP8.82□□□□□ -1
CHD8-212ENST00000557329 PADI6Q6TGC4 694 aa8.81□□□□□ -1
CHD8-212ENST00000557329 TSKSQ9UJT2 592 aa8.81□□□□□ -1
CHD8-212ENST00000557329 TATDN2Q93075 761 aa8.8□□□□□ -1
CHD8-212ENST00000557329 PNMA3Q9UL41 463 aa8.79□□□□□ -1
CHD8-212ENST00000557329 MINK1Q8N4C8 1332 aaPredicted RBP8.79□□□□□ -1
CHD8-212ENST00000557329 GPR37O15354 613 aa8.77□□□□□ -1.01
CHD8-212ENST00000557329 PPP4CP60510 307 aa8.77□□□□□ -1.01
CHD8-212ENST00000557329 MAP2K5Q13163 448 aa8.77□□□□□ -1.01
CHD8-212ENST00000557329 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.76□□□□□ -1.01
CHD8-212ENST00000557329 TJAP1Q5JTD0 557 aa8.76□□□□□ -1.01
CHD8-212ENST00000557329 NUDT18Q6ZVK8 323 aa8.76□□□□□ -1.01
CHD8-212ENST00000557329 ADGRG1Q9Y653 693 aa8.75□□□□□ -1.01
CHD8-212ENST00000557329 ZMYND10O75800 440 aa8.74□□□□□ -1.01
CHD8-212ENST00000557329 DNAJB2P25686 324 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms