RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 FGD5Q6ZNL6 1462 aa8.86□□□□□ -0.99
ATXN3-247ENST00000557311 C2orf72A6NCS6 295 aa8.86□□□□□ -0.99
ATXN3-247ENST00000557311 GTPBP6O43824 516 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-247ENST00000557311 WDR97A6NE52 1622 aa8.84□□□□□ -0.99
ATXN3-247ENST00000557311 ZNF316A6NFI3 1004 aaPredicted RBP8.83□□□□□ -1
ATXN3-247ENST00000557311 RNF166Q96A37 237 aaPredicted RBP8.82□□□□□ -1
ATXN3-247ENST00000557311 TMC2Q8TDI7 906 aa8.81□□□□□ -1
ATXN3-247ENST00000557311 NUDT7P0C024 238 aa8.79□□□□□ -1
ATXN3-247ENST00000557311 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
ATXN3-247ENST00000557311 MYT1LQ9UL68 1186 aa8.79□□□□□ -1
ATXN3-247ENST00000557311 CUX1P39880 1505 aa8.79□□□□□ -1
ATXN3-247ENST00000557311 POTEEQ6S8J3 1075 aa8.77□□□□□ -1.01
ATXN3-247ENST00000557311 ANKRD13DQ6ZTN6 518 aa8.77□□□□□ -1.01
ATXN3-247ENST00000557311 JPH4Q96JJ6 628 aa8.77□□□□□ -1.01
ATXN3-247ENST00000557311 ABCA10Q8WWZ4 1543 aa8.76□□□□□ -1.01
ATXN3-247ENST00000557311 KDM4FA0A1W2PPD8 638 aa8.76□□□□□ -1.01
ATXN3-247ENST00000557311 LHX6Q9UPM6 363 aa8.76□□□□□ -1.01
ATXN3-247ENST00000557311 PCDHGA4Q9Y5G9 962 aa8.76□□□□□ -1.01
ATXN3-247ENST00000557311 NUP160Q12769 1436 aa8.76□□□□□ -1.01
ATXN3-247ENST00000557311 GRIN2AQ12879 1464 aa8.75□□□□□ -1.01
ATXN3-247ENST00000557311 ERCC6L2Q5T890 1561 aa8.74□□□□□ -1.01
ATXN3-247ENST00000557311 SLC34A2O95436 690 aa8.74□□□□□ -1.01
ATXN3-247ENST00000557311 LSM11P83369 360 aaKnown RBP eCLIP8.73□□□□□ -1.01
ATXN3-247ENST00000557311 AXIN2Q9Y2T1 843 aa8.73□□□□□ -1.01
ATXN3-247ENST00000557311 FHAD1B1AJZ9 1412 aa8.72□□□□□ -1.01
ATXN3-247ENST00000557311 WRNQ14191 1432 aaPredicted RBP eCLIP8.72□□□□□ -1.01
ATXN3-247ENST00000557311 PRG4Q92954 1404 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-247ENST00000557311 CEP170Q5SW79 1584 aa8.72□□□□□ -1.01
ATXN3-247ENST00000557311 ABCC10Q5T3U5 1492 aa8.7□□□□□ -1.02
ATXN3-247ENST00000557311 PDE4AP27815 886 aa8.7□□□□□ -1.02
ATXN3-247ENST00000557311 HAP1P54257 671 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-247ENST00000557311 PLCB2Q00722 1185 aa8.69□□□□□ -1.02
ATXN3-247ENST00000557311 LARP6Q9BRS8 491 aaKnown RBP8.69□□□□□ -1.02
ATXN3-247ENST00000557311 ABCA5Q8WWZ7 1642 aa8.68□□□□□ -1.02
ATXN3-247ENST00000557311 PTGER2P43116 358 aa8.67□□□□□ -1.02
ATXN3-247ENST00000557311 PBX2P40425 430 aa8.66□□□□□ -1.02
ATXN3-247ENST00000557311 CADPS2Q86UW7 1296 aa8.66□□□□□ -1.02
ATXN3-247ENST00000557311 GPHNQ9NQX3 736 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-247ENST00000557311 WDR70Q9NW82 654 aa8.66□□□□□ -1.02
ATXN3-247ENST00000557311 PBRM1Q86U86 1689 aa8.65□□□□□ -1.02
ATXN3-247ENST00000557311 PLPP6Q8IY26 295 aa8.65□□□□□ -1.02
ATXN3-247ENST00000557311 DDX27Q96GQ7 796 aaKnown RBP8.65□□□□□ -1.02
ATXN3-247ENST00000557311 TSHZ2Q9NRE2 1034 aa8.65□□□□□ -1.02
ATXN3-247ENST00000557311 SHROOM2Q13796 1616 aa8.65□□□□□ -1.03
ATXN3-247ENST00000557311 DSG2Q14126 1118 aa8.64□□□□□ -1.03
ATXN3-247ENST00000557311 PPP1R15BQ5SWA1 713 aa8.64□□□□□ -1.03
ATXN3-247ENST00000557311 PTCD2Q8WV60 388 aaKnown RBP8.64□□□□□ -1.03
ATXN3-247ENST00000557311 ADAMTS12P58397 1594 aa8.64□□□□□ -1.03
ATXN3-247ENST00000557311 NCKAP5LQ9HCH0 1330 aa8.63□□□□□ -1.03
ATXN3-247ENST00000557311 FOXK1P85037 733 aa8.63□□□□□ -1.03
ATXN3-247ENST00000557311 MAPKBP1O60336 1514 aa8.63□□□□□ -1.03
ATXN3-247ENST00000557311 ERICH3Q5RHP9 1530 aa8.63□□□□□ -1.03
ATXN3-247ENST00000557311 CRISPLD2Q9H0B8 497 aa8.62□□□□□ -1.03
ATXN3-247ENST00000557311 ARHGAP33O14559 1287 aa8.61□□□□□ -1.03
ATXN3-247ENST00000557311 KIF13AQ9H1H9 1805 aa8.6□□□□□ -1.03
ATXN3-247ENST00000557311 PSEN2P49810 448 aa8.6□□□□□ -1.03
ATXN3-247ENST00000557311 DMRTA1Q5VZB9 504 aa8.6□□□□□ -1.03
ATXN3-247ENST00000557311 UPF1Q92900 1129 aaKnown RBP eCLIP8.6□□□□□ -1.03
ATXN3-247ENST00000557311 SUPT5HO00267 1087 aaKnown RBP8.59□□□□□ -1.03
ATXN3-247ENST00000557311 ADGRD1Q6QNK2 874 aa8.59□□□□□ -1.03
ATXN3-247ENST00000557311 KDM6BO15054 1643 aa8.58□□□□□ -1.04
ATXN3-247ENST00000557311 DIP2BQ9P265 1576 aa8.58□□□□□ -1.04
ATXN3-247ENST00000557311 PTPRGP23470 1445 aa8.58□□□□□ -1.04
ATXN3-247ENST00000557311 TBC1D12O60347 775 aa8.58□□□□□ -1.04
ATXN3-247ENST00000557311 KIAA0586Q9BVV6 1533 aa8.57□□□□□ -1.04
ATXN3-247ENST00000557311 TTBK1Q5TCY1 1321 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-247ENST00000557311 IGF1RP08069 1367 aa8.56□□□□□ -1.04
ATXN3-247ENST00000557311 TOP2BQ02880 1626 aa8.55□□□□□ -1.04
ATXN3-247ENST00000557311 PSDA5PKW4 1024 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-247ENST00000557311 HRO43593 1189 aa8.55□□□□□ -1.04
ATXN3-247ENST00000557311 PLB1Q6P1J6 1458 aa8.54□□□□□ -1.04
ATXN3-247ENST00000557311 MAP3K9P80192 1104 aa8.54□□□□□ -1.04
ATXN3-247ENST00000557311 ADCY10Q96PN6 1610 aa8.54□□□□□ -1.04
ATXN3-247ENST00000557311 ADGRL1O94910 1474 aa8.53□□□□□ -1.04
ATXN3-247ENST00000557311 TNIKQ9UKE5 1360 aa8.53□□□□□ -1.04
ATXN3-247ENST00000557311 MFSD10Q14728 455 aa8.53□□□□□ -1.04
ATXN3-247ENST00000557311 OXER1Q8TDS5 423 aa8.53□□□□□ -1.04
ATXN3-247ENST00000557311 ASXL2Q76L83 1435 aa8.53□□□□□ -1.04
ATXN3-247ENST00000557311 TK2O00142 265 aa8.52□□□□□ -1.05
ATXN3-247ENST00000557311 FBXO41Q8TF61 875 aa8.52□□□□□ -1.05
ATXN3-247ENST00000557311 CARMIL2Q6F5E8 1435 aa8.52□□□□□ -1.05
ATXN3-247ENST00000557311 RUSC2Q8N2Y8 1516 aa8.51□□□□□ -1.05
ATXN3-247ENST00000557311 ABCC2Q92887 1545 aa8.51□□□□□ -1.05
ATXN3-247ENST00000557311 HCSTQ9UBK5 93 aa8.51□□□□□ -1.05
ATXN3-247ENST00000557311 COL17A1Q9UMD9 1497 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-247ENST00000557311 BIVM-ERCC5R4GMW8 1640 aa8.51□□□□□ -1.05
ATXN3-247ENST00000557311 E2F4Q16254 413 aa8.5□□□□□ -1.05
ATXN3-247ENST00000557311 PPP4R3BQ5MIZ7 849 aa8.5□□□□□ -1.05
ATXN3-247ENST00000557311 PLA2G2EQ9NZK7 142 aa8.5□□□□□ -1.05
ATXN3-247ENST00000557311 KIF27Q86VH2 1401 aa8.49□□□□□ -1.05
ATXN3-247ENST00000557311 CARMIL1Q5VZK9 1371 aa8.48□□□□□ -1.05
ATXN3-247ENST00000557311 GLI2P10070 1586 aa8.48□□□□□ -1.05
ATXN3-247ENST00000557311 UACAQ9BZF9 1416 aa8.48□□□□□ -1.05
ATXN3-247ENST00000557311 KCNK17Q96T54 332 aa8.48□□□□□ -1.05
ATXN3-247ENST00000557311 UHRF1BP1LA0JNW5 1464 aa8.47□□□□□ -1.05
ATXN3-247ENST00000557311 DPYSL4O14531 572 aa8.47□□□□□ -1.05
ATXN3-247ENST00000557311 TEX14Q8IWB6 1497 aa8.46□□□□□ -1.05
ATXN3-247ENST00000557311 KCTD12Q96CX2 325 aaKnown RBP8.46□□□□□ -1.06
ATXN3-247ENST00000557311 EMILIN3Q9NT22 766 aa8.46□□□□□ -1.06
ATXN3-247ENST00000557311 TSPOAP1O95153 1857 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms