RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 PHF14O94880 888 aa6.24□□□□□ -1.41
PTPN21-209ENST00000557249 NYAP1Q6ZVC0 841 aa6.24□□□□□ -1.41
PTPN21-209ENST00000557249 LAPTM4BQ86VI4 370 aa6.24□□□□□ -1.41
PTPN21-209ENST00000557249 BCAMP50895 628 aa6.23□□□□□ -1.41
PTPN21-209ENST00000557249 EMILIN3Q9NT22 766 aa6.23□□□□□ -1.41
PTPN21-209ENST00000557249 SOWAHBA6NEL2 793 aa6.22□□□□□ -1.41
PTPN21-209ENST00000557249 COL9A1P20849 921 aa6.22□□□□□ -1.41
PTPN21-209ENST00000557249 EPAS1Q99814 870 aa6.22□□□□□ -1.41
PTPN21-209ENST00000557249 KIAA1468Q9P260 1216 aa6.22□□□□□ -1.41
PTPN21-209ENST00000557249 ONECUT3O60422 494 aaPredicted RBP6.21□□□□□ -1.42
PTPN21-209ENST00000557249 ITGBL1O95965 494 aaPredicted RBP6.21□□□□□ -1.42
PTPN21-209ENST00000557249 KCNC4Q03721 635 aa6.21□□□□□ -1.42
PTPN21-209ENST00000557249 ZFRQ96KR1 1074 aaKnown RBP6.21□□□□□ -1.42
PTPN21-209ENST00000557249 C6orf132Q5T0Z8 1188 aa6.2□□□□□ -1.42
PTPN21-209ENST00000557249 Q6ZNB5 142 aa6.19□□□□□ -1.42
PTPN21-209ENST00000557249 RBM33Q96EV2 1170 aaKnown RBP6.19□□□□□ -1.42
PTPN21-209ENST00000557249 LRCH3Q96II8 777 aa6.19□□□□□ -1.42
PTPN21-209ENST00000557249 WBP1LQ9NX94 342 aa6.19□□□□□ -1.42
PTPN21-209ENST00000557249 SEPT9Q9UHD8 586 aaPredicted RBP6.19□□□□□ -1.42
PTPN21-209ENST00000557249 FAM98CQ17RN3 349 aaKnown RBP6.18□□□□□ -1.42
PTPN21-209ENST00000557249 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.18□□□□□ -1.42
PTPN21-209ENST00000557249 TRIM6-TRIM34B2RNG4 842 aa6.17□□□□□ -1.42
PTPN21-209ENST00000557249 DPYSL4O14531 572 aa6.17□□□□□ -1.42
PTPN21-209ENST00000557249 TSR3Q9UJK0 312 aaKnown RBP6.17□□□□□ -1.42
PTPN21-209ENST00000557249 HPS5Q9UPZ3 1129 aa6.17□□□□□ -1.42
PTPN21-209ENST00000557249 PACS2Q86VP3 889 aa6.16□□□□□ -1.42
PTPN21-209ENST00000557249 CADPS2Q86UW7 1296 aa6.15□□□□□ -1.42
PTPN21-209ENST00000557249 DDX12PQ92771 950 aa6.15□□□□□ -1.42
PTPN21-209ENST00000557249 MAP3K7O43318 606 aa6.14□□□□□ -1.43
PTPN21-209ENST00000557249 PPP4CP60510 307 aa6.14□□□□□ -1.43
PTPN21-209ENST00000557249 LAPTM4AQ15012 233 aa6.14□□□□□ -1.43
PTPN21-209ENST00000557249 CAMK2BQ13554 666 aa6.13□□□□□ -1.43
PTPN21-209ENST00000557249 NBR1Q14596 966 aa6.12□□□□□ -1.43
PTPN21-209ENST00000557249 HDGFP51858 240 aaKnown RBP6.11□□□□□ -1.43
PTPN21-209ENST00000557249 EN1Q05925 392 aaPredicted RBP6.1□□□□□ -1.43
PTPN21-209ENST00000557249 SPDYE16A6NNV3 312 aaPredicted RBP6.09□□□□□ -1.43
PTPN21-209ENST00000557249 GFRA3O60609 400 aa6.09□□□□□ -1.43
PTPN21-209ENST00000557249 CERKQ8TCT0 537 aa6.08□□□□□ -1.44
PTPN21-209ENST00000557249 TSKSQ9UJT2 592 aa6.08□□□□□ -1.44
PTPN21-209ENST00000557249 NBPF26B4DH59 902 aa6.07□□□□□ -1.44
PTPN21-209ENST00000557249 RNF40O75150 1001 aa6.07□□□□□ -1.44
PTPN21-209ENST00000557249 PDIA6Q15084 440 aa6.07□□□□□ -1.44
PTPN21-209ENST00000557249 TSR1Q2NL82 804 aaKnown RBP6.07□□□□□ -1.44
PTPN21-209ENST00000557249 SAMD7Q7Z3H4 446 aa6.07□□□□□ -1.44
PTPN21-209ENST00000557249 CDCA7LQ96GN5 454 aa6.07□□□□□ -1.44
PTPN21-209ENST00000557249 SMAPO00193 183 aa6.06□□□□□ -1.44
PTPN21-209ENST00000557249 PRSS12P56730 875 aa6.06□□□□□ -1.44
PTPN21-209ENST00000557249 TRAF7Q6Q0C0 670 aa6.06□□□□□ -1.44
PTPN21-209ENST00000557249 PRKD2Q9BZL6 878 aa6.06□□□□□ -1.44
PTPN21-209ENST00000557249 IL21Q9HBE4 155 aa6.06□□□□□ -1.44
PTPN21-209ENST00000557249 GRXCR2A6NFK2 248 aa6.05□□□□□ -1.44
PTPN21-209ENST00000557249 TJAP1Q5JTD0 557 aa6.05□□□□□ -1.44
PTPN21-209ENST00000557249 BBXQ8WY36 941 aaPredicted RBP6.05□□□□□ -1.44
PTPN21-209ENST00000557249 WDR70Q9NW82 654 aa6.05□□□□□ -1.44
PTPN21-209ENST00000557249 PNMA3Q9UL41 463 aa6.05□□□□□ -1.44
PTPN21-209ENST00000557249 SLC4A3P48751 1232 aa6.04□□□□□ -1.44
PTPN21-209ENST00000557249 NECTIN2Q92692 538 aa6.04□□□□□ -1.44
PTPN21-209ENST00000557249 TATDN2Q93075 761 aa6.04□□□□□ -1.44
PTPN21-209ENST00000557249 MTRQ99707 1265 aa6.04□□□□□ -1.44
PTPN21-209ENST00000557249 GGCXP38435 758 aa6.03□□□□□ -1.44
PTPN21-209ENST00000557249 E2F4Q16254 413 aa6.03□□□□□ -1.44
PTPN21-209ENST00000557249 V9GY48 417 aaPredicted RBP6.03□□□□□ -1.44
PTPN21-209ENST00000557249 NRG2O14511 850 aaPredicted RBP6.02□□□□□ -1.45
PTPN21-209ENST00000557249 PPP1R18Q6NYC8 613 aa6.02□□□□□ -1.45
PTPN21-209ENST00000557249 SPRYD3Q8NCJ5 442 aa6.02□□□□□ -1.45
PTPN21-209ENST00000557249 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.02□□□□□ -1.45
PTPN21-209ENST00000557249 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.02□□□□□ -1.45
PTPN21-209ENST00000557249 NUDT18Q6ZVK8 323 aa6□□□□□ -1.45
PTPN21-209ENST00000557249 SLF2Q8IX21 1173 aa5.99□□□□□ -1.45
PTPN21-209ENST00000557249 ZNF516Q92618 1163 aa5.99□□□□□ -1.45
PTPN21-209ENST00000557249 RBM27Q9P2N5 1060 aaKnown RBP5.99□□□□□ -1.45
PTPN21-209ENST00000557249 FAM198AQ9UFP1 575 aa5.99□□□□□ -1.45
PTPN21-209ENST00000557249 PDZRN3Q9UPQ7 1066 aa5.99□□□□□ -1.45
PTPN21-209ENST00000557249 APLP1P51693 650 aa5.97□□□□□ -1.45
PTPN21-209ENST00000557249 COPS2P61201 443 aa5.97□□□□□ -1.45
PTPN21-209ENST00000557249 PRR14Q9BWN1 585 aa5.97□□□□□ -1.45
PTPN21-209ENST00000557249 ZNF787Q6DD87 383 aa5.96□□□□□ -1.46
PTPN21-209ENST00000557249 CDHR5Q9HBB8 845 aa5.96□□□□□ -1.46
PTPN21-209ENST00000557249 ARIH1Q9Y4X5 557 aaPredicted RBP5.96□□□□□ -1.46
PTPN21-209ENST00000557249 C3orf80F5H4A9 247 aa5.95□□□□□ -1.46
PTPN21-209ENST00000557249 OSBPP22059 807 aa5.95□□□□□ -1.46
PTPN21-209ENST00000557249 SWT1Q5T5J6 900 aaKnown RBP5.95□□□□□ -1.46
PTPN21-209ENST00000557249 NKX2-3Q8TAU0 364 aa5.95□□□□□ -1.46
PTPN21-209ENST00000557249 TMUB1Q9BVT8 246 aa5.95□□□□□ -1.46
PTPN21-209ENST00000557249 PRIM1P49642 420 aaKnown RBP5.94□□□□□ -1.46
PTPN21-209ENST00000557249 PADI6Q6TGC4 694 aa5.94□□□□□ -1.46
PTPN21-209ENST00000557249 CFAP44Q96MT7 982 aa5.94□□□□□ -1.46
PTPN21-209ENST00000557249 LCE2BO14633 110 aa5.93□□□□□ -1.46
PTPN21-209ENST00000557249 ZPR1O75312 459 aa5.93□□□□□ -1.46
PTPN21-209ENST00000557249 PCDHB3Q9Y5E6 796 aa5.93□□□□□ -1.46
PTPN21-209ENST00000557249 PAXIP1Q6ZW49 1069 aaPredicted RBP5.92□□□□□ -1.46
PTPN21-209ENST00000557249 SLC19A1P41440 591 aa5.9□□□□□ -1.46
PTPN21-209ENST00000557249 TTC13Q8NBP0 860 aa5.9□□□□□ -1.46
PTPN21-209ENST00000557249 KMT5BQ4FZB7 885 aa5.89□□□□□ -1.47
PTPN21-209ENST00000557249 PKDCCQ504Y2 493 aa5.89□□□□□ -1.47
PTPN21-209ENST00000557249 NPDC1Q9NQX5 325 aaPredicted RBP5.89□□□□□ -1.47
PTPN21-209ENST00000557249 DNAJB2P25686 324 aa5.88□□□□□ -1.47
PTPN21-209ENST00000557249 BLOC1S3Q6QNY0 202 aa5.88□□□□□ -1.47
PTPN21-209ENST00000557249 RBM46Q8TBY0 533 aaKnown RBP5.88□□□□□ -1.47
PTPN21-209ENST00000557249 EYA1Q99502 592 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms