RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 ZNF316A6NFI3 1004 aaPredicted RBP8.83□□□□□ -1
ATXN3-244ENST00000556898 PPP1R37O75864 691 aa8.82□□□□□ -1
ATXN3-244ENST00000556898 RNF166Q96A37 237 aaPredicted RBP8.82□□□□□ -1
ATXN3-244ENST00000556898 NUDT7P0C024 238 aa8.79□□□□□ -1
ATXN3-244ENST00000556898 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
ATXN3-244ENST00000556898 MYT1LQ9UL68 1186 aa8.79□□□□□ -1
ATXN3-244ENST00000556898 POTEEQ6S8J3 1075 aa8.77□□□□□ -1.01
ATXN3-244ENST00000556898 ANKRD13DQ6ZTN6 518 aa8.77□□□□□ -1.01
ATXN3-244ENST00000556898 JPH4Q96JJ6 628 aa8.77□□□□□ -1.01
ATXN3-244ENST00000556898 ABCA10Q8WWZ4 1543 aa8.76□□□□□ -1.01
ATXN3-244ENST00000556898 KDM4FA0A1W2PPD8 638 aa8.76□□□□□ -1.01
ATXN3-244ENST00000556898 LHX6Q9UPM6 363 aa8.76□□□□□ -1.01
ATXN3-244ENST00000556898 PCDHGA4Q9Y5G9 962 aa8.76□□□□□ -1.01
ATXN3-244ENST00000556898 NUP160Q12769 1436 aa8.76□□□□□ -1.01
ATXN3-244ENST00000556898 GRIN2AQ12879 1464 aa8.75□□□□□ -1.01
ATXN3-244ENST00000556898 ERCC6L2Q5T890 1561 aa8.74□□□□□ -1.01
ATXN3-244ENST00000556898 SLC34A2O95436 690 aa8.74□□□□□ -1.01
ATXN3-244ENST00000556898 KIF27Q86VH2 1401 aa8.73□□□□□ -1.01
ATXN3-244ENST00000556898 LSM11P83369 360 aaKnown RBP eCLIP8.73□□□□□ -1.01
ATXN3-244ENST00000556898 AXIN2Q9Y2T1 843 aa8.73□□□□□ -1.01
ATXN3-244ENST00000556898 FHAD1B1AJZ9 1412 aa8.72□□□□□ -1.01
ATXN3-244ENST00000556898 PRG4Q92954 1404 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-244ENST00000556898 LOC105371045A0A1W2PR82 267 aa8.72□□□□□ -1.01
ATXN3-244ENST00000556898 TMC2Q8TDI7 906 aa8.72□□□□□ -1.01
ATXN3-244ENST00000556898 CEP170Q5SW79 1584 aa8.72□□□□□ -1.01
ATXN3-244ENST00000556898 ABCA5Q8WWZ7 1642 aa8.71□□□□□ -1.02
ATXN3-244ENST00000556898 IGF1RP08069 1367 aa8.71□□□□□ -1.02
ATXN3-244ENST00000556898 ABCC10Q5T3U5 1492 aa8.7□□□□□ -1.02
ATXN3-244ENST00000556898 EEA1Q15075 1411 aa8.68□□□□□ -1.02
ATXN3-244ENST00000556898 PTGER2P43116 358 aa8.67□□□□□ -1.02
ATXN3-244ENST00000556898 PBRM1Q86U86 1689 aa8.66□□□□□ -1.02
ATXN3-244ENST00000556898 PBX2P40425 430 aa8.66□□□□□ -1.02
ATXN3-244ENST00000556898 RAPGEF2Q9Y4G8 1499 aa8.65□□□□□ -1.02
ATXN3-244ENST00000556898 HS6ST3Q8IZP7 471 aa8.65□□□□□ -1.02
ATXN3-244ENST00000556898 SHROOM2Q13796 1616 aa8.65□□□□□ -1.03
ATXN3-244ENST00000556898 PRXQ9BXM0 1461 aa8.64□□□□□ -1.03
ATXN3-244ENST00000556898 CARMIL1Q5VZK9 1371 aa8.64□□□□□ -1.03
ATXN3-244ENST00000556898 PTCD2Q8WV60 388 aaKnown RBP8.64□□□□□ -1.03
ATXN3-244ENST00000556898 ADAMTS12P58397 1594 aa8.64□□□□□ -1.03
ATXN3-244ENST00000556898 ERICH3Q5RHP9 1530 aa8.64□□□□□ -1.03
ATXN3-244ENST00000556898 FOXK1P85037 733 aa8.63□□□□□ -1.03
ATXN3-244ENST00000556898 PLPP6Q8IY26 295 aa8.63□□□□□ -1.03
ATXN3-244ENST00000556898 MAPKBP1O60336 1514 aa8.63□□□□□ -1.03
ATXN3-244ENST00000556898 DSG2Q14126 1118 aa8.62□□□□□ -1.03
ATXN3-244ENST00000556898 NKX1-1Q15270 411 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-244ENST00000556898 GPHNQ9NQX3 736 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-244ENST00000556898 KIF21BO75037 1637 aa8.62□□□□□ -1.03
ATXN3-244ENST00000556898 ARHGAP33O14559 1287 aa8.61□□□□□ -1.03
ATXN3-244ENST00000556898 GOLGA3Q08378 1498 aa8.6□□□□□ -1.03
ATXN3-244ENST00000556898 KIF13AQ9H1H9 1805 aa8.6□□□□□ -1.03
ATXN3-244ENST00000556898 UBTFP17480 764 aaKnown RBP8.6□□□□□ -1.03
ATXN3-244ENST00000556898 PSEN2P49810 448 aa8.6□□□□□ -1.03
ATXN3-244ENST00000556898 DMRTA1Q5VZB9 504 aa8.6□□□□□ -1.03
ATXN3-244ENST00000556898 CUL7Q14999 1698 aa8.59□□□□□ -1.03
ATXN3-244ENST00000556898 CHGAP10645 457 aaKnown RBP8.59□□□□□ -1.03
ATXN3-244ENST00000556898 RANGAP1P46060 587 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-244ENST00000556898 ADGRD1Q6QNK2 874 aa8.59□□□□□ -1.03
ATXN3-244ENST00000556898 KDM6BO15054 1643 aa8.58□□□□□ -1.04
ATXN3-244ENST00000556898 DIP2BQ9P265 1576 aa8.58□□□□□ -1.04
ATXN3-244ENST00000556898 PTPRGP23470 1445 aa8.58□□□□□ -1.04
ATXN3-244ENST00000556898 KIAA0586Q9BVV6 1533 aa8.57□□□□□ -1.04
ATXN3-244ENST00000556898 TTBK1Q5TCY1 1321 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-244ENST00000556898 PSDA5PKW4 1024 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-244ENST00000556898 HRO43593 1189 aa8.55□□□□□ -1.04
ATXN3-244ENST00000556898 PLB1Q6P1J6 1458 aa8.54□□□□□ -1.04
ATXN3-244ENST00000556898 TNIKQ9UKE5 1360 aa8.54□□□□□ -1.04
ATXN3-244ENST00000556898 ADCY10Q96PN6 1610 aa8.54□□□□□ -1.04
ATXN3-244ENST00000556898 ADGRL1O94910 1474 aa8.53□□□□□ -1.04
ATXN3-244ENST00000556898 OXER1Q8TDS5 423 aa8.53□□□□□ -1.04
ATXN3-244ENST00000556898 ASXL2Q76L83 1435 aa8.53□□□□□ -1.04
ATXN3-244ENST00000556898 TK2O00142 265 aa8.52□□□□□ -1.05
ATXN3-244ENST00000556898 FBXO41Q8TF61 875 aa8.52□□□□□ -1.05
ATXN3-244ENST00000556898 CARMIL2Q6F5E8 1435 aa8.52□□□□□ -1.05
ATXN3-244ENST00000556898 ABCC2Q92887 1545 aa8.51□□□□□ -1.05
ATXN3-244ENST00000556898 UPF1Q92900 1129 aaKnown RBP eCLIP8.51□□□□□ -1.05
ATXN3-244ENST00000556898 CRISPLD2Q9H0B8 497 aa8.51□□□□□ -1.05
ATXN3-244ENST00000556898 HCSTQ9UBK5 93 aa8.51□□□□□ -1.05
ATXN3-244ENST00000556898 COL17A1Q9UMD9 1497 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-244ENST00000556898 TBC1D12O60347 775 aa8.5□□□□□ -1.05
ATXN3-244ENST00000556898 PPP4R3BQ5MIZ7 849 aa8.5□□□□□ -1.05
ATXN3-244ENST00000556898 CEP162Q5TB80 1403 aa8.5□□□□□ -1.05
ATXN3-244ENST00000556898 PLA2G2EQ9NZK7 142 aa8.5□□□□□ -1.05
ATXN3-244ENST00000556898 P3H3Q8IVL6 736 aa8.49□□□□□ -1.05
ATXN3-244ENST00000556898 NCKAP5LQ9HCH0 1330 aa8.49□□□□□ -1.05
ATXN3-244ENST00000556898 GLI2P10070 1586 aa8.48□□□□□ -1.05
ATXN3-244ENST00000556898 UACAQ9BZF9 1416 aa8.48□□□□□ -1.05
ATXN3-244ENST00000556898 KCNK17Q96T54 332 aa8.48□□□□□ -1.05
ATXN3-244ENST00000556898 CTTNBP2Q8WZ74 1663 aa8.48□□□□□ -1.05
ATXN3-244ENST00000556898 CLIP1P30622 1438 aa8.47□□□□□ -1.05
ATXN3-244ENST00000556898 UHRF1BP1LA0JNW5 1464 aa8.47□□□□□ -1.05
ATXN3-244ENST00000556898 TEX14Q8IWB6 1497 aa8.46□□□□□ -1.05
ATXN3-244ENST00000556898 ARHGAP35Q9NRY4 1499 aa8.46□□□□□ -1.05
ATXN3-244ENST00000556898 PPP1R15BQ5SWA1 713 aa8.46□□□□□ -1.06
ATXN3-244ENST00000556898 BBXQ8WY36 941 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-244ENST00000556898 KCTD12Q96CX2 325 aaKnown RBP8.46□□□□□ -1.06
ATXN3-244ENST00000556898 IQGAP2Q13576 1575 aa8.46□□□□□ -1.06
ATXN3-244ENST00000556898 TSPOAP1O95153 1857 aa8.46□□□□□ -1.06
ATXN3-244ENST00000556898 EPRSP07814 1512 aaKnown RBP8.45□□□□□ -1.06
ATXN3-244ENST00000556898 HECW2Q9P2P5 1572 aa8.45□□□□□ -1.06
ATXN3-244ENST00000556898 ZNF454Q8N9F8 522 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms