RNA–Protein interactions for RNA: ENST00000556830.1

LRP1-212, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 1,847 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-212ENST00000556830 PREX2Q70Z35 1606 aa16.96■□□□□ 0.31
LRP1-212ENST00000556830 RRP1P56182 461 aaKnown RBP16.96■□□□□ 0.3
LRP1-212ENST00000556830 TTC37Q6PGP7 1564 aa16.96■□□□□ 0.3
LRP1-212ENST00000556830 LRPPRCP42704 1394 aaKnown RBP16.95■□□□□ 0.3
LRP1-212ENST00000556830 PDE3BQ13370 1112 aa16.95■□□□□ 0.3
LRP1-212ENST00000556830 PLEKHD1A6NEE1 506 aa16.94■□□□□ 0.3
LRP1-212ENST00000556830 PNISRQ8TF01 805 aaKnown RBP16.94■□□□□ 0.3
LRP1-212ENST00000556830 ROCK1Q13464 1354 aa16.94■□□□□ 0.3
LRP1-212ENST00000556830 RSPH6AQ9H0K4 717 aa16.93■□□□□ 0.3
LRP1-212ENST00000556830 RTN4Q9NQC3 1192 aaKnown RBP16.93■□□□□ 0.3
LRP1-212ENST00000556830 CFDP1Q9UEE9 299 aaPredicted RBP16.93■□□□□ 0.3
LRP1-212ENST00000556830 BRD4O60885 1362 aaPredicted RBP16.92■□□□□ 0.3
LRP1-212ENST00000556830 LAS1LQ9Y4W2 734 aaKnown RBP16.91■□□□□ 0.3
LRP1-212ENST00000556830 MYO5CQ9NQX4 1742 aa16.91■□□□□ 0.3
LRP1-212ENST00000556830 INSRP06213 1382 aa16.9■□□□□ 0.3
LRP1-212ENST00000556830 NBPF8Q3BBV2 869 aa16.9■□□□□ 0.3
LRP1-212ENST00000556830 ZNF777Q9ULD5 760 aaPredicted RBP16.9■□□□□ 0.3
LRP1-212ENST00000556830 RIMBP3CA6NJZ7 1639 aa16.9■□□□□ 0.3
LRP1-212ENST00000556830 RIMBP3BA6NNM3 1639 aa16.9■□□□□ 0.3
LRP1-212ENST00000556830 RIMBP3Q9UFD9 1639 aa16.9■□□□□ 0.3
LRP1-212ENST00000556830 SAMD9LQ8IVG5 1584 aa16.9■□□□□ 0.3
LRP1-212ENST00000556830 NPM2Q86SE8 214 aaKnown RBP16.89■□□□□ 0.29
LRP1-212ENST00000556830 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.89■□□□□ 0.29
LRP1-212ENST00000556830 MBD5Q9P267 1494 aa16.89■□□□□ 0.29
LRP1-212ENST00000556830 KIF15Q9NS87 1388 aa16.88■□□□□ 0.29
LRP1-212ENST00000556830 ZMYM4Q5VZL5 1548 aa16.87■□□□□ 0.29
LRP1-212ENST00000556830 FAM43AQ8N2R8 423 aa16.87■□□□□ 0.29
LRP1-212ENST00000556830 TMC1Q8TDI8 760 aa16.87■□□□□ 0.29
LRP1-212ENST00000556830 UHRF1BP1LA0JNW5 1464 aa16.87■□□□□ 0.29
LRP1-212ENST00000556830 RCAN3Q9UKA8 241 aa16.86■□□□□ 0.29
LRP1-212ENST00000556830 RALBP1Q15311 655 aa16.86■□□□□ 0.29
LRP1-212ENST00000556830 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.86■□□□□ 0.29
LRP1-212ENST00000556830 ADGRL2O95490 1459 aa16.85■□□□□ 0.29
LRP1-212ENST00000556830 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
LRP1-212ENST00000556830 NFKBIBQ15653 356 aa16.84■□□□□ 0.29
LRP1-212ENST00000556830 EXOC6Q8TAG9 804 aa16.84■□□□□ 0.29
LRP1-212ENST00000556830 ARHGEF5Q12774 1597 aa16.84■□□□□ 0.29
LRP1-212ENST00000556830 BRPF3Q9ULD4 1205 aa16.83■□□□□ 0.28
LRP1-212ENST00000556830 MYBBP1AQ9BQG0 1328 aaKnown RBP16.83■□□□□ 0.28
LRP1-212ENST00000556830 KDM5CP41229 1560 aa16.83■□□□□ 0.28
LRP1-212ENST00000556830 SHANK2Q9UPX8 1470 aa16.82■□□□□ 0.28
LRP1-212ENST00000556830 USP47Q96K76 1375 aa16.82■□□□□ 0.28
LRP1-212ENST00000556830 CYB5RLQ6IPT4 315 aa16.82■□□□□ 0.28
LRP1-212ENST00000556830 ARHGAP5Q13017 1502 aa16.82■□□□□ 0.28
LRP1-212ENST00000556830 DAXXQ9UER7 740 aaPredicted RBP16.82■□□□□ 0.28
LRP1-212ENST00000556830 SYCP2Q9BX26 1530 aa16.81■□□□□ 0.28
LRP1-212ENST00000556830 BCORL1Q5H9F3 1711 aa16.81■□□□□ 0.28
LRP1-212ENST00000556830 C9orf84Q5VXU9 1444 aa16.8■□□□□ 0.28
LRP1-212ENST00000556830 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
LRP1-212ENST00000556830 FRAT1Q92837 279 aaPredicted RBP16.78■□□□□ 0.28
LRP1-212ENST00000556830 PLEKHH2Q8IVE3 1493 aa16.78■□□□□ 0.28
LRP1-212ENST00000556830 RALGAPBQ86X10 1494 aa16.76■□□□□ 0.27
LRP1-212ENST00000556830 CCDC141Q6ZP82 1450 aa16.76■□□□□ 0.27
LRP1-212ENST00000556830 ANKRD30AQ9BXX3 1397 aa16.75■□□□□ 0.27
LRP1-212ENST00000556830 PZPP20742 1482 aa16.75■□□□□ 0.27
LRP1-212ENST00000556830 HNRNPMP52272 730 aaKnown RBP eCLIP16.75■□□□□ 0.27
LRP1-212ENST00000556830 E9PCH4 1651 aa16.74■□□□□ 0.27
LRP1-212ENST00000556830 GLIPR1L2Q4G1C9 344 aa16.73■□□□□ 0.27
LRP1-212ENST00000556830 ARHGEF12Q9NZN5 1544 aa16.73■□□□□ 0.27
LRP1-212ENST00000556830 EIF5BO60841 1220 aaKnown RBP16.73■□□□□ 0.27
LRP1-212ENST00000556830 FOXD1Q16676 465 aa16.73■□□□□ 0.27
LRP1-212ENST00000556830 NLRP13Q86W25 1043 aa16.72■□□□□ 0.27
LRP1-212ENST00000556830 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
LRP1-212ENST00000556830 MAST1Q9Y2H9 1570 aa16.72■□□□□ 0.27
LRP1-212ENST00000556830 CENPQQ7L2Z9 268 aaPredicted RBP16.71■□□□□ 0.27
LRP1-212ENST00000556830 ANKRD50Q9ULJ7 1429 aa16.71■□□□□ 0.27
LRP1-212ENST00000556830 KIAA1107Q9UPP5 1409 aa16.71■□□□□ 0.27
LRP1-212ENST00000556830 WDR7Q9Y4E6 1490 aa16.7■□□□□ 0.26
LRP1-212ENST00000556830 ABCC1P33527 1531 aa16.7■□□□□ 0.26
LRP1-212ENST00000556830 FAM161AQ3B820 660 aa16.7■□□□□ 0.26
LRP1-212ENST00000556830 KDM2BQ8NHM5 1336 aa16.69■□□□□ 0.26
LRP1-212ENST00000556830 PARD3Q8TEW0 1356 aa16.68■□□□□ 0.26
LRP1-212ENST00000556830 PLXNC1O60486 1568 aa16.68■□□□□ 0.26
LRP1-212ENST00000556830 PLCH2O75038 1416 aa16.67■□□□□ 0.26
LRP1-212ENST00000556830 BLMP54132 1417 aaPredicted RBP16.67■□□□□ 0.26
LRP1-212ENST00000556830 ABCA9Q8IUA7 1624 aa16.67■□□□□ 0.26
LRP1-212ENST00000556830 L1TD1Q5T7N2 865 aaKnown RBP16.66■□□□□ 0.26
LRP1-212ENST00000556830 KDM5DQ9BY66 1539 aa16.66■□□□□ 0.26
LRP1-212ENST00000556830 TSPY4P0CV99 314 aa16.65■□□□□ 0.26
LRP1-212ENST00000556830 TSPY10P0CW01 314 aa16.65■□□□□ 0.26
LRP1-212ENST00000556830 ARAP3Q8WWN8 1544 aa16.63■□□□□ 0.25
LRP1-212ENST00000556830 ASXL2Q76L83 1435 aa16.63■□□□□ 0.25
LRP1-212ENST00000556830 UNC13BO14795 1591 aa16.62■□□□□ 0.25
LRP1-212ENST00000556830 CRBNQ96SW2 442 aa16.62■□□□□ 0.25
LRP1-212ENST00000556830 C8orf34Q49A92 452 aa16.61■□□□□ 0.25
LRP1-212ENST00000556830 POLR3GLQ9BT43 218 aa16.6■□□□□ 0.25
LRP1-212ENST00000556830 TRAPPC8Q9Y2L5 1435 aa16.6■□□□□ 0.25
LRP1-212ENST00000556830 FRAT2O75474 233 aaPredicted RBP16.59■□□□□ 0.25
LRP1-212ENST00000556830 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.59■□□□□ 0.25
LRP1-212ENST00000556830 CARD11Q9BXL7 1154 aa16.58■□□□□ 0.24
LRP1-212ENST00000556830 NUP155O75694 1391 aa16.58■□□□□ 0.24
LRP1-212ENST00000556830 EIF3AQ14152 1382 aaKnown RBP16.58■□□□□ 0.24
LRP1-212ENST00000556830 ZFYVE16Q7Z3T8 1539 aa16.57■□□□□ 0.24
LRP1-212ENST00000556830 FAM135AQ9P2D6 1515 aa16.57■□□□□ 0.24
LRP1-212ENST00000556830 RSPH4AQ5TD94 716 aa16.56■□□□□ 0.24
LRP1-212ENST00000556830 EFCAB2Q5VUJ9 269 aa16.56■□□□□ 0.24
LRP1-212ENST00000556830 PKNOX2Q96KN3 472 aa16.56■□□□□ 0.24
LRP1-212ENST00000556830 FANCAO15360 1455 aa16.56■□□□□ 0.24
LRP1-212ENST00000556830 PKD2Q13563 968 aa16.56■□□□□ 0.24
LRP1-212ENST00000556830 DUOX2Q9NRD8 1548 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms