RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 HRO43593 1189 aa12.75□□□□□ -0.37
HIF1A-209ENST00000556827 RBM33Q96EV2 1170 aaKnown RBP12.75□□□□□ -0.37
HIF1A-209ENST00000556827 PPP1R3GB7ZBB8 358 aa12.74□□□□□ -0.37
HIF1A-209ENST00000556827 NBR1Q14596 966 aa12.74□□□□□ -0.37
HIF1A-209ENST00000556827 ZBED2Q9BTP6 218 aa12.74□□□□□ -0.37
HIF1A-209ENST00000556827 SLC4A5Q9BY07 1137 aa12.74□□□□□ -0.37
HIF1A-209ENST00000556827 SLC24A1O60721 1099 aa12.71□□□□□ -0.37
HIF1A-209ENST00000556827 COL9A1P20849 921 aa12.7□□□□□ -0.38
HIF1A-209ENST00000556827 GRXCR2A6NFK2 248 aa12.69□□□□□ -0.38
HIF1A-209ENST00000556827 MAP3K7O43318 606 aa12.69□□□□□ -0.38
HIF1A-209ENST00000556827 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
HIF1A-209ENST00000556827 C6orf132Q5T0Z8 1188 aa12.69□□□□□ -0.38
HIF1A-209ENST00000556827 EN1Q05925 392 aaPredicted RBP12.67□□□□□ -0.38
HIF1A-209ENST00000556827 KCNV2Q8TDN2 545 aa12.67□□□□□ -0.38
HIF1A-209ENST00000556827 PROX2Q3B8N5 592 aa12.66□□□□□ -0.38
HIF1A-209ENST00000556827 KCTD12Q96CX2 325 aaKnown RBP12.66□□□□□ -0.38
HIF1A-209ENST00000556827 NBPF3Q9H094 633 aa12.66□□□□□ -0.38
HIF1A-209ENST00000556827 MRPL50Q8N5N7 158 aaKnown RBP12.65□□□□□ -0.38
HIF1A-209ENST00000556827 ARHGEF1Q92888 912 aaKnown RBP12.65□□□□□ -0.38
HIF1A-209ENST00000556827 GOLGA8CPA6NN73 597 aa12.64□□□□□ -0.39
HIF1A-209ENST00000556827 P3H3Q8IVL6 736 aa12.64□□□□□ -0.39
HIF1A-209ENST00000556827 TSR1Q2NL82 804 aaKnown RBP12.63□□□□□ -0.39
HIF1A-209ENST00000556827 BHMG1C9JSJ3 638 aaPredicted RBP12.62□□□□□ -0.39
HIF1A-209ENST00000556827 HCSTQ9UBK5 93 aa12.62□□□□□ -0.39
HIF1A-209ENST00000556827 RABGEF1Q9UJ41 708 aa12.61□□□□□ -0.39
HIF1A-209ENST00000556827 PRIM1P49642 420 aaKnown RBP12.57□□□□□ -0.4
HIF1A-209ENST00000556827 KIAA1468Q9P260 1216 aa12.57□□□□□ -0.4
HIF1A-209ENST00000556827 TRIM6-TRIM34B2RNG4 842 aa12.56□□□□□ -0.4
HIF1A-209ENST00000556827 OSBPP22059 807 aa12.56□□□□□ -0.4
HIF1A-209ENST00000556827 WNT2BQ93097 391 aa12.56□□□□□ -0.4
HIF1A-209ENST00000556827 ONECUT3O60422 494 aaPredicted RBP12.53□□□□□ -0.4
HIF1A-209ENST00000556827 PTPN5P54829 565 aa12.53□□□□□ -0.4
HIF1A-209ENST00000556827 MLLT3P42568 568 aaPredicted RBP12.52□□□□□ -0.41
HIF1A-209ENST00000556827 CERKQ8TCT0 537 aa12.52□□□□□ -0.41
HIF1A-209ENST00000556827 CDHR5Q9HBB8 845 aa12.52□□□□□ -0.41
HIF1A-209ENST00000556827 SEPT9Q9UHD8 586 aaPredicted RBP12.52□□□□□ -0.41
HIF1A-209ENST00000556827 THSD4Q6ZMP0 1018 aa12.51□□□□□ -0.41
HIF1A-209ENST00000556827 LAPTM4BQ86VI4 370 aa12.51□□□□□ -0.41
HIF1A-209ENST00000556827 ANKK1Q8NFD2 765 aa12.51□□□□□ -0.41
HIF1A-209ENST00000556827 PACS2Q86VP3 889 aa12.5□□□□□ -0.41
HIF1A-209ENST00000556827 CDCA7LQ96GN5 454 aa12.49□□□□□ -0.41
HIF1A-209ENST00000556827 TSKSQ9UJT2 592 aa12.49□□□□□ -0.41
HIF1A-209ENST00000556827 PRSS12P56730 875 aa12.48□□□□□ -0.41
HIF1A-209ENST00000556827 KDM2AQ9Y2K7 1162 aa12.47□□□□□ -0.41
HIF1A-209ENST00000556827 FAM98CQ17RN3 349 aaKnown RBP12.46□□□□□ -0.41
HIF1A-209ENST00000556827 ZFRQ96KR1 1074 aaKnown RBP12.46□□□□□ -0.41
HIF1A-209ENST00000556827 SEMA3EO15041 775 aa12.44□□□□□ -0.42
HIF1A-209ENST00000556827 BCAMP50895 628 aa12.43□□□□□ -0.42
HIF1A-209ENST00000556827 PLA2G2EQ9NZK7 142 aa12.43□□□□□ -0.42
HIF1A-209ENST00000556827 NBPF26B4DH59 902 aa12.42□□□□□ -0.42
HIF1A-209ENST00000556827 VSIG10Q8N0Z9 540 aa12.41□□□□□ -0.42
HIF1A-209ENST00000556827 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
HIF1A-209ENST00000556827 FAM198AQ9UFP1 575 aa12.41□□□□□ -0.42
HIF1A-209ENST00000556827 SOWAHBA6NEL2 793 aa12.4□□□□□ -0.42
HIF1A-209ENST00000556827 SMAPO00193 183 aa12.4□□□□□ -0.42
HIF1A-209ENST00000556827 NUTM2FA1L443 756 aa12.39□□□□□ -0.43
HIF1A-209ENST00000556827 PNMA3Q9UL41 463 aa12.39□□□□□ -0.43
HIF1A-209ENST00000556827 PADI6Q6TGC4 694 aa12.38□□□□□ -0.43
HIF1A-209ENST00000556827 TATDN2Q93075 761 aa12.38□□□□□ -0.43
HIF1A-209ENST00000556827 LRCH3Q96II8 777 aa12.38□□□□□ -0.43
HIF1A-209ENST00000556827 NPDC1Q9NQX5 325 aaPredicted RBP12.38□□□□□ -0.43
HIF1A-209ENST00000556827 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.37□□□□□ -0.43
HIF1A-209ENST00000556827 NUDT18Q6ZVK8 323 aa12.35□□□□□ -0.43
HIF1A-209ENST00000556827 TESPA1A2RU30 521 aaPredicted RBP12.34□□□□□ -0.43
HIF1A-209ENST00000556827 C3orf80F5H4A9 247 aa12.34□□□□□ -0.43
HIF1A-209ENST00000556827 SMYD5Q6GMV2 418 aa12.34□□□□□ -0.43
HIF1A-209ENST00000556827 PTGDRQ13258 359 aa12.33□□□□□ -0.44
HIF1A-209ENST00000556827 HPS5Q9UPZ3 1129 aa12.33□□□□□ -0.44
HIF1A-209ENST00000556827 TTC13Q8NBP0 860 aa12.32□□□□□ -0.44
HIF1A-209ENST00000556827 WBP1LQ9NX94 342 aa12.32□□□□□ -0.44
HIF1A-209ENST00000556827 SAMD7Q7Z3H4 446 aa12.31□□□□□ -0.44
HIF1A-209ENST00000556827 TSR3Q9UJK0 312 aaKnown RBP12.3□□□□□ -0.44
HIF1A-209ENST00000556827 FCHSD2O94868 740 aa12.29□□□□□ -0.44
HIF1A-209ENST00000556827 HDGFP51858 240 aaKnown RBP12.29□□□□□ -0.44
HIF1A-209ENST00000556827 NYAP1Q6ZVC0 841 aa12.29□□□□□ -0.44
HIF1A-209ENST00000556827 RNF40O75150 1001 aa12.28□□□□□ -0.44
HIF1A-209ENST00000556827 RBM26Q5T8P6 1007 aaKnown RBP12.27□□□□□ -0.45
HIF1A-209ENST00000556827 PPP4CP60510 307 aa12.26□□□□□ -0.45
HIF1A-209ENST00000556827 RBM46Q8TBY0 533 aaKnown RBP12.22□□□□□ -0.45
HIF1A-209ENST00000556827 SLC4A3P48751 1232 aa12.21□□□□□ -0.45
HIF1A-209ENST00000556827 SWT1Q5T5J6 900 aaKnown RBP12.21□□□□□ -0.45
HIF1A-209ENST00000556827 EYA1Q99502 592 aa12.21□□□□□ -0.45
HIF1A-209ENST00000556827 HIC1Q14526 733 aa12.2□□□□□ -0.46
HIF1A-209ENST00000556827 ADGRG1Q9Y653 693 aa12.2□□□□□ -0.46
HIF1A-209ENST00000556827 FAM161AQ3B820 660 aa12.19□□□□□ -0.46
HIF1A-209ENST00000556827 TULP1O00294 542 aaPredicted RBP12.18□□□□□ -0.46
HIF1A-209ENST00000556827 ITGBL1O95965 494 aaPredicted RBP12.18□□□□□ -0.46
HIF1A-209ENST00000556827 IFFO2Q5TF58 517 aa12.18□□□□□ -0.46
HIF1A-209ENST00000556827 SLF2Q8IX21 1173 aa12.18□□□□□ -0.46
HIF1A-209ENST00000556827 DNAJB2P25686 324 aa12.17□□□□□ -0.46
HIF1A-209ENST00000556827 NECTIN2Q92692 538 aa12.17□□□□□ -0.46
HIF1A-209ENST00000556827 GPIHBP1Q8IV16 184 aa12.16□□□□□ -0.46
HIF1A-209ENST00000556827 GNPATO15228 680 aa12.14□□□□□ -0.47
HIF1A-209ENST00000556827 KCNC4Q03721 635 aa12.14□□□□□ -0.47
HIF1A-209ENST00000556827 A0A0G2JS52 829 aa12.12□□□□□ -0.47
HIF1A-209ENST00000556827 RCCD1A6NED2 376 aa12.12□□□□□ -0.47
HIF1A-209ENST00000556827 GPR37O15354 613 aa12.12□□□□□ -0.47
HIF1A-209ENST00000556827 OATP04181 439 aa12.12□□□□□ -0.47
HIF1A-209ENST00000556827 TMEM134Q9H6X4 195 aa12.12□□□□□ -0.47
HIF1A-209ENST00000556827 FECHP22830 423 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms