RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 TYW1BQ6NUM6 668 aa10.9□□□□□ -0.66
TMEM260-212ENST00000556810 E2F4Q16254 413 aa10.89□□□□□ -0.67
TMEM260-212ENST00000556810 FBXW7Q969H0 707 aa10.89□□□□□ -0.67
TMEM260-212ENST00000556810 STAC3Q96MF2 364 aa10.89□□□□□ -0.67
TMEM260-212ENST00000556810 ZBED2Q9BTP6 218 aa10.88□□□□□ -0.67
TMEM260-212ENST00000556810 SLC24A1O60721 1099 aa10.87□□□□□ -0.67
TMEM260-212ENST00000556810 MYO15BQ96JP2 1530 aa10.87□□□□□ -0.67
TMEM260-212ENST00000556810 EPAS1Q99814 870 aa10.86□□□□□ -0.67
TMEM260-212ENST00000556810 PPP1R3GB7ZBB8 358 aa10.85□□□□□ -0.67
TMEM260-212ENST00000556810 PDIA6Q15084 440 aa10.85□□□□□ -0.67
TMEM260-212ENST00000556810 SPDYE16A6NNV3 312 aaPredicted RBP10.84□□□□□ -0.67
TMEM260-212ENST00000556810 DDX12PQ92771 950 aa10.84□□□□□ -0.67
TMEM260-212ENST00000556810 TSHZ2Q9NRE2 1034 aa10.83□□□□□ -0.68
TMEM260-212ENST00000556810 HCSTQ9UBK5 93 aa10.83□□□□□ -0.68
TMEM260-212ENST00000556810 ARIH1Q9Y4X5 557 aaPredicted RBP10.83□□□□□ -0.68
TMEM260-212ENST00000556810 BHMG1C9JSJ3 638 aaPredicted RBP10.82□□□□□ -0.68
TMEM260-212ENST00000556810 COL9A1P20849 921 aa10.82□□□□□ -0.68
TMEM260-212ENST00000556810 KCTD12Q96CX2 325 aaKnown RBP10.82□□□□□ -0.68
TMEM260-212ENST00000556810 C6orf132Q5T0Z8 1188 aa10.8□□□□□ -0.68
TMEM260-212ENST00000556810 RBM33Q96EV2 1170 aaKnown RBP10.8□□□□□ -0.68
TMEM260-212ENST00000556810 NBR1Q14596 966 aa10.79□□□□□ -0.68
TMEM260-212ENST00000556810 PROX2Q3B8N5 592 aa10.78□□□□□ -0.68
TMEM260-212ENST00000556810 MRPL50Q8N5N7 158 aaKnown RBP10.78□□□□□ -0.68
TMEM260-212ENST00000556810 NBPF3Q9H094 633 aa10.78□□□□□ -0.68
TMEM260-212ENST00000556810 GOLGA8CPA6NN73 597 aa10.76□□□□□ -0.69
TMEM260-212ENST00000556810 EN1Q05925 392 aaPredicted RBP10.76□□□□□ -0.69
TMEM260-212ENST00000556810 RABGEF1Q9UJ41 708 aa10.76□□□□□ -0.69
TMEM260-212ENST00000556810 CC2D2AQ9P2K1 1620 aa10.74□□□□□ -0.69
TMEM260-212ENST00000556810 MAP3K7O43318 606 aa10.74□□□□□ -0.69
TMEM260-212ENST00000556810 CECR2Q9BXF3 1484 aa10.74□□□□□ -0.69
TMEM260-212ENST00000556810 GRXCR2A6NFK2 248 aa10.72□□□□□ -0.69
TMEM260-212ENST00000556810 ONECUT3O60422 494 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-212ENST00000556810 TSR1Q2NL82 804 aaKnown RBP10.72□□□□□ -0.69
TMEM260-212ENST00000556810 WNT2BQ93097 391 aa10.72□□□□□ -0.69
TMEM260-212ENST00000556810 THSD4Q6ZMP0 1018 aa10.71□□□□□ -0.69
TMEM260-212ENST00000556810 KIAA1468Q9P260 1216 aa10.71□□□□□ -0.69
TMEM260-212ENST00000556810 PTPN5P54829 565 aa10.7□□□□□ -0.7
TMEM260-212ENST00000556810 SHROOM4Q9ULL8 1493 aa10.69□□□□□ -0.7
TMEM260-212ENST00000556810 TRIM6-TRIM34B2RNG4 842 aa10.69□□□□□ -0.7
TMEM260-212ENST00000556810 PRIM1P49642 420 aaKnown RBP10.68□□□□□ -0.7
TMEM260-212ENST00000556810 PLA2G2EQ9NZK7 142 aa10.68□□□□□ -0.7
TMEM260-212ENST00000556810 SCRIBQ14160 1630 aa10.67□□□□□ -0.7
TMEM260-212ENST00000556810 LAPTM4BQ86VI4 370 aa10.67□□□□□ -0.7
TMEM260-212ENST00000556810 OSBPP22059 807 aa10.66□□□□□ -0.7
TMEM260-212ENST00000556810 PLCB2Q00722 1185 aa10.66□□□□□ -0.7
TMEM260-212ENST00000556810 KCNV2Q8TDN2 545 aa10.66□□□□□ -0.7
TMEM260-212ENST00000556810 ARHGEF1Q92888 912 aaKnown RBP10.66□□□□□ -0.7
TMEM260-212ENST00000556810 EIF4G1Q04637 1599 aaKnown RBP10.65□□□□□ -0.7
TMEM260-212ENST00000556810 ANKK1Q8NFD2 765 aa10.65□□□□□ -0.7
TMEM260-212ENST00000556810 SEPT9Q9UHD8 586 aaPredicted RBP10.65□□□□□ -0.7
TMEM260-212ENST00000556810 CERKQ8TCT0 537 aa10.63□□□□□ -0.71
TMEM260-212ENST00000556810 ZFRQ96KR1 1074 aaKnown RBP10.63□□□□□ -0.71
TMEM260-212ENST00000556810 TSKSQ9UJT2 592 aa10.63□□□□□ -0.71
TMEM260-212ENST00000556810 PACS2Q86VP3 889 aa10.62□□□□□ -0.71
TMEM260-212ENST00000556810 PRSS12P56730 875 aa10.61□□□□□ -0.71
TMEM260-212ENST00000556810 FAM98CQ17RN3 349 aaKnown RBP10.61□□□□□ -0.71
TMEM260-212ENST00000556810 CDCA7LQ96GN5 454 aa10.61□□□□□ -0.71
TMEM260-212ENST00000556810 CDHR5Q9HBB8 845 aa10.61□□□□□ -0.71
TMEM260-212ENST00000556810 SOWAHBA6NEL2 793 aa10.59□□□□□ -0.71
TMEM260-212ENST00000556810 BCAMP50895 628 aa10.59□□□□□ -0.71
TMEM260-212ENST00000556810 P3H3Q8IVL6 736 aa10.59□□□□□ -0.71
TMEM260-212ENST00000556810 MLLT3P42568 568 aaPredicted RBP10.57□□□□□ -0.72
TMEM260-212ENST00000556810 FAM198AQ9UFP1 575 aa10.57□□□□□ -0.72
TMEM260-212ENST00000556810 RBM27Q9P2N5 1060 aaKnown RBP10.55□□□□□ -0.72
TMEM260-212ENST00000556810 NBPF26B4DH59 902 aa10.54□□□□□ -0.72
TMEM260-212ENST00000556810 SMAPO00193 183 aa10.54□□□□□ -0.72
TMEM260-212ENST00000556810 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.54□□□□□ -0.72
TMEM260-212ENST00000556810 TATDN2Q93075 761 aa10.53□□□□□ -0.72
TMEM260-212ENST00000556810 LRCH3Q96II8 777 aa10.53□□□□□ -0.72
TMEM260-212ENST00000556810 PNMA3Q9UL41 463 aa10.53□□□□□ -0.72
TMEM260-212ENST00000556810 NPDC1Q9NQX5 325 aaPredicted RBP10.52□□□□□ -0.73
TMEM260-212ENST00000556810 C3orf80F5H4A9 247 aa10.51□□□□□ -0.73
TMEM260-212ENST00000556810 NYAP1Q6ZVC0 841 aa10.51□□□□□ -0.73
TMEM260-212ENST00000556810 WBP1LQ9NX94 342 aa10.51□□□□□ -0.73
TMEM260-212ENST00000556810 HAP1P54257 671 aaPredicted RBP10.5□□□□□ -0.73
TMEM260-212ENST00000556810 IFFO2Q5TF58 517 aa10.5□□□□□ -0.73
TMEM260-212ENST00000556810 PADI6Q6TGC4 694 aa10.5□□□□□ -0.73
TMEM260-212ENST00000556810 TSR3Q9UJK0 312 aaKnown RBP10.5□□□□□ -0.73
TMEM260-212ENST00000556810 HPS5Q9UPZ3 1129 aa10.5□□□□□ -0.73
TMEM260-212ENST00000556810 NUDT18Q6ZVK8 323 aa10.49□□□□□ -0.73
TMEM260-212ENST00000556810 TTC13Q8NBP0 860 aa10.49□□□□□ -0.73
TMEM260-212ENST00000556810 SAMD7Q7Z3H4 446 aa10.48□□□□□ -0.73
TMEM260-212ENST00000556810 SEMA3EO15041 775 aa10.47□□□□□ -0.73
TMEM260-212ENST00000556810 ITGBL1O95965 494 aaPredicted RBP10.44□□□□□ -0.74
TMEM260-212ENST00000556810 PPP4CP60510 307 aa10.44□□□□□ -0.74
TMEM260-212ENST00000556810 PTGDRQ13258 359 aa10.44□□□□□ -0.74
TMEM260-212ENST00000556810 NUTM2FA1L443 756 aa10.43□□□□□ -0.74
TMEM260-212ENST00000556810 A0A0G2JS52 829 aa10.42□□□□□ -0.74
TMEM260-212ENST00000556810 HDGFP51858 240 aaKnown RBP10.42□□□□□ -0.74
TMEM260-212ENST00000556810 TESPA1A2RU30 521 aaPredicted RBP10.39□□□□□ -0.75
TMEM260-212ENST00000556810 RNF40O75150 1001 aa10.39□□□□□ -0.75
TMEM260-212ENST00000556810 EYA1Q99502 592 aa10.39□□□□□ -0.75
TMEM260-212ENST00000556810 KDM2AQ9Y2K7 1162 aa10.39□□□□□ -0.75
TMEM260-212ENST00000556810 KCNC4Q03721 635 aa10.38□□□□□ -0.75
TMEM260-212ENST00000556810 SWT1Q5T5J6 900 aaKnown RBP10.38□□□□□ -0.75
TMEM260-212ENST00000556810 FCHSD2O94868 740 aa10.37□□□□□ -0.75
TMEM260-212ENST00000556810 SMYD5Q6GMV2 418 aa10.36□□□□□ -0.75
TMEM260-212ENST00000556810 RGS20O76081 388 aa10.35□□□□□ -0.75
TMEM260-212ENST00000556810 SUPT5HO00267 1087 aaKnown RBP10.34□□□□□ -0.75
TMEM260-212ENST00000556810 SLF2Q8IX21 1173 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms