RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 LAMC3Q9Y6N6 1575 aa10.13□□□□□ -0.79
PRPF39-211ENST00000556782 A0A0G2JS52 829 aa10.12□□□□□ -0.79
PRPF39-211ENST00000556782 ZBED2Q9BTP6 218 aa10.12□□□□□ -0.79
PRPF39-211ENST00000556782 DNAJC5Q9H3Z4 198 aa10.11□□□□□ -0.79
PRPF39-211ENST00000556782 CHGAP10645 457 aaKnown RBP10.1□□□□□ -0.79
PRPF39-211ENST00000556782 PPP1R15BQ5SWA1 713 aa10.1□□□□□ -0.79
PRPF39-211ENST00000556782 NBPF3Q9H094 633 aa10.1□□□□□ -0.79
PRPF39-211ENST00000556782 CRISPLD2Q9H0B8 497 aa10.1□□□□□ -0.79
PRPF39-211ENST00000556782 RYDENQ9NUL5 291 aaKnown RBP10.1□□□□□ -0.79
PRPF39-211ENST00000556782 RSF1Q96T23 1441 aaPredicted RBP10.09□□□□□ -0.79
PRPF39-211ENST00000556782 JPH4Q96JJ6 628 aa10.09□□□□□ -0.79
PRPF39-211ENST00000556782 ANO8Q9HCE9 1232 aaPredicted RBP10.08□□□□□ -0.8
PRPF39-211ENST00000556782 ZDHHC16Q969W1 377 aa10.07□□□□□ -0.8
PRPF39-211ENST00000556782 THOC2Q8NI27 1593 aaKnown RBP10.06□□□□□ -0.8
PRPF39-211ENST00000556782 EVI5O60447 810 aa10.05□□□□□ -0.8
PRPF39-211ENST00000556782 PDE4AP27815 886 aa10.05□□□□□ -0.8
PRPF39-211ENST00000556782 ADAM33Q9BZ11 813 aa10.05□□□□□ -0.8
PRPF39-211ENST00000556782 PDS5BQ9NTI5 1447 aa10.05□□□□□ -0.8
PRPF39-211ENST00000556782 CADPSQ9ULU8 1353 aa10.04□□□□□ -0.8
PRPF39-211ENST00000556782 TOP2AP11388 1531 aaKnown RBP10.04□□□□□ -0.8
PRPF39-211ENST00000556782 KIF21AQ7Z4S6 1674 aa10.04□□□□□ -0.8
PRPF39-211ENST00000556782 NKX1-1Q15270 411 aaPredicted RBP10.02□□□□□ -0.81
PRPF39-211ENST00000556782 ANKK1Q8NFD2 765 aa10□□□□□ -0.81
PRPF39-211ENST00000556782 NCKAP5LQ9HCH0 1330 aa10□□□□□ -0.81
PRPF39-211ENST00000556782 MAP3K9P80192 1104 aa9.99□□□□□ -0.81
PRPF39-211ENST00000556782 RABGEF1Q9UJ41 708 aa9.99□□□□□ -0.81
PRPF39-211ENST00000556782 PPP1R3GB7ZBB8 358 aa9.98□□□□□ -0.81
PRPF39-211ENST00000556782 ITGBL1O95965 494 aaPredicted RBP9.97□□□□□ -0.81
PRPF39-211ENST00000556782 CFTRP13569 1480 aa9.97□□□□□ -0.81
PRPF39-211ENST00000556782 MRC2Q9UBG0 1479 aa9.97□□□□□ -0.81
PRPF39-211ENST00000556782 DDX27Q96GQ7 796 aaKnown RBP9.96□□□□□ -0.82
PRPF39-211ENST00000556782 LARP6Q9BRS8 491 aaKnown RBP9.96□□□□□ -0.82
PRPF39-211ENST00000556782 CEP164Q9UPV0 1460 aa9.95□□□□□ -0.82
PRPF39-211ENST00000556782 WDR62O43379 1518 aa9.95□□□□□ -0.82
PRPF39-211ENST00000556782 FANCD2Q9BXW9 1451 aa9.94□□□□□ -0.82
PRPF39-211ENST00000556782 PROX2Q3B8N5 592 aa9.94□□□□□ -0.82
PRPF39-211ENST00000556782 LAPTM4BQ86VI4 370 aa9.94□□□□□ -0.82
PRPF39-211ENST00000556782 Q6ZNB5 142 aa9.93□□□□□ -0.82
PRPF39-211ENST00000556782 NYAP1Q6ZVC0 841 aa9.93□□□□□ -0.82
PRPF39-211ENST00000556782 PCDHGA10Q9Y5H3 936 aa9.93□□□□□ -0.82
PRPF39-211ENST00000556782 SOWAHBA6NEL2 793 aa9.92□□□□□ -0.82
PRPF39-211ENST00000556782 BCAMP50895 628 aa9.92□□□□□ -0.82
PRPF39-211ENST00000556782 COL9A1P20849 921 aa9.91□□□□□ -0.82
PRPF39-211ENST00000556782 FBXW7Q969H0 707 aa9.91□□□□□ -0.82
PRPF39-211ENST00000556782 CCDC88BA6NC98 1476 aa9.91□□□□□ -0.82
PRPF39-211ENST00000556782 TYW1BQ6NUM6 668 aa9.9□□□□□ -0.82
PRPF39-211ENST00000556782 KCNC4Q03721 635 aa9.89□□□□□ -0.83
PRPF39-211ENST00000556782 ZFRQ96KR1 1074 aaKnown RBP9.89□□□□□ -0.83
PRPF39-211ENST00000556782 KIAA1468Q9P260 1216 aa9.89□□□□□ -0.83
PRPF39-211ENST00000556782 PHF14O94880 888 aa9.88□□□□□ -0.83
PRPF39-211ENST00000556782 MFSD10Q14728 455 aa9.88□□□□□ -0.83
PRPF39-211ENST00000556782 PRDM2Q13029 1718 aa9.87□□□□□ -0.83
PRPF39-211ENST00000556782 ONECUT3O60422 494 aaPredicted RBP9.87□□□□□ -0.83
PRPF39-211ENST00000556782 EMILIN3Q9NT22 766 aa9.87□□□□□ -0.83
PRPF39-211ENST00000556782 WBP1LQ9NX94 342 aa9.87□□□□□ -0.83
PRPF39-211ENST00000556782 URB2Q14146 1524 aaKnown RBP9.87□□□□□ -0.83
PRPF39-211ENST00000556782 GTPBP6O43824 516 aaPredicted RBP9.85□□□□□ -0.83
PRPF39-211ENST00000556782 LAPTM4AQ15012 233 aa9.83□□□□□ -0.84
PRPF39-211ENST00000556782 C6orf132Q5T0Z8 1188 aa9.82□□□□□ -0.84
PRPF39-211ENST00000556782 SEPT9Q9UHD8 586 aaPredicted RBP9.82□□□□□ -0.84
PRPF39-211ENST00000556782 FAM98CQ17RN3 349 aaKnown RBP9.81□□□□□ -0.84
PRPF39-211ENST00000556782 EPAS1Q99814 870 aa9.81□□□□□ -0.84
PRPF39-211ENST00000556782 TSR3Q9UJK0 312 aaKnown RBP9.81□□□□□ -0.84
PRPF39-211ENST00000556782 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.8□□□□□ -0.84
PRPF39-211ENST00000556782 TRIM6-TRIM34B2RNG4 842 aa9.79□□□□□ -0.84
PRPF39-211ENST00000556782 LRCH3Q96II8 777 aa9.79□□□□□ -0.84
PRPF39-211ENST00000556782 HPS5Q9UPZ3 1129 aa9.78□□□□□ -0.84
PRPF39-211ENST00000556782 TOPBP1Q92547 1522 aa9.77□□□□□ -0.85
PRPF39-211ENST00000556782 DNMBPQ6XZF7 1577 aa9.75□□□□□ -0.85
PRPF39-211ENST00000556782 GFRA3O60609 400 aa9.75□□□□□ -0.85
PRPF39-211ENST00000556782 ABCC8Q09428 1581 aa9.75□□□□□ -0.85
PRPF39-211ENST00000556782 IFT140Q96RY7 1462 aa9.74□□□□□ -0.85
PRPF39-211ENST00000556782 AMER1Q5JTC6 1135 aaPredicted RBP9.74□□□□□ -0.85
PRPF39-211ENST00000556782 TRAF7Q6Q0C0 670 aa9.74□□□□□ -0.85
PRPF39-211ENST00000556782 RBM33Q96EV2 1170 aaKnown RBP9.74□□□□□ -0.85
PRPF39-211ENST00000556782 DPYSL4O14531 572 aa9.72□□□□□ -0.85
PRPF39-211ENST00000556782 PPP4CP60510 307 aa9.72□□□□□ -0.85
PRPF39-211ENST00000556782 PACS2Q86VP3 889 aa9.72□□□□□ -0.85
PRPF39-211ENST00000556782 CADPS2Q86UW7 1296 aa9.71□□□□□ -0.86
PRPF39-211ENST00000556782 ZNF608Q9ULD9 1512 aaPredicted RBP9.71□□□□□ -0.86
PRPF39-211ENST00000556782 CAMK2BQ13554 666 aa9.7□□□□□ -0.86
PRPF39-211ENST00000556782 DDX12PQ92771 950 aa9.7□□□□□ -0.86
PRPF39-211ENST00000556782 SUPT5HO00267 1087 aaKnown RBP9.69□□□□□ -0.86
PRPF39-211ENST00000556782 TARBP1Q13395 1621 aaKnown RBP9.68□□□□□ -0.86
PRPF39-211ENST00000556782 EIF4G3O43432 1585 aaKnown RBP9.68□□□□□ -0.86
PRPF39-211ENST00000556782 POLA1P09884 1462 aaPredicted RBP9.68□□□□□ -0.86
PRPF39-211ENST00000556782 PRKD2Q9BZL6 878 aa9.68□□□□□ -0.86
PRPF39-211ENST00000556782 LCE2BO14633 110 aa9.67□□□□□ -0.86
PRPF39-211ENST00000556782 BBXQ8WY36 941 aaPredicted RBP9.67□□□□□ -0.86
PRPF39-211ENST00000556782 TSKSQ9UJT2 592 aa9.67□□□□□ -0.86
PRPF39-211ENST00000556782 NRG2O14511 850 aaPredicted RBP9.66□□□□□ -0.86
PRPF39-211ENST00000556782 TJAP1Q5JTD0 557 aa9.66□□□□□ -0.86
PRPF39-211ENST00000556782 MAP3K7O43318 606 aa9.65□□□□□ -0.86
PRPF39-211ENST00000556782 CUX1P39880 1505 aa9.65□□□□□ -0.86
PRPF39-211ENST00000556782 EN1Q05925 392 aaPredicted RBP9.64□□□□□ -0.87
PRPF39-211ENST00000556782 NBR1Q14596 966 aa9.64□□□□□ -0.87
PRPF39-211ENST00000556782 RTN4Q9NQC3 1192 aaKnown RBP9.64□□□□□ -0.87
PRPF39-211ENST00000556782 V9GY48 417 aaPredicted RBP9.64□□□□□ -0.87
PRPF39-211ENST00000556782 TSR1Q2NL82 804 aaKnown RBP9.63□□□□□ -0.87
PRPF39-211ENST00000556782 SAMD7Q7Z3H4 446 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms