RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 TSHZ2Q9NRE2 1034 aa10.3□□□□□ -0.76
ATXN3-243ENST00000556671 PPP1R3GB7ZBB8 358 aa10.29□□□□□ -0.76
ATXN3-243ENST00000556671 BHMG1C9JSJ3 638 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-243ENST00000556671 DDX12PQ92771 950 aa10.28□□□□□ -0.76
ATXN3-243ENST00000556671 STAC3Q96MF2 364 aa10.28□□□□□ -0.76
ATXN3-243ENST00000556671 COL9A1P20849 921 aa10.26□□□□□ -0.77
ATXN3-243ENST00000556671 C6orf132Q5T0Z8 1188 aa10.25□□□□□ -0.77
ATXN3-243ENST00000556671 HCSTQ9UBK5 93 aa10.24□□□□□ -0.77
ATXN3-243ENST00000556671 KCTD12Q96CX2 325 aaKnown RBP10.23□□□□□ -0.77
ATXN3-243ENST00000556671 EN1Q05925 392 aaPredicted RBP10.22□□□□□ -0.77
ATXN3-243ENST00000556671 NBR1Q14596 966 aa10.22□□□□□ -0.77
ATXN3-243ENST00000556671 PROX2Q3B8N5 592 aa10.22□□□□□ -0.77
ATXN3-243ENST00000556671 RBM33Q96EV2 1170 aaKnown RBP10.22□□□□□ -0.77
ATXN3-243ENST00000556671 NBPF3Q9H094 633 aa10.21□□□□□ -0.77
ATXN3-243ENST00000556671 RABGEF1Q9UJ41 708 aa10.21□□□□□ -0.77
ATXN3-243ENST00000556671 MRPL50Q8N5N7 158 aaKnown RBP10.2□□□□□ -0.78
ATXN3-243ENST00000556671 ONECUT3O60422 494 aaPredicted RBP10.18□□□□□ -0.78
ATXN3-243ENST00000556671 GRXCR2A6NFK2 248 aa10.17□□□□□ -0.78
ATXN3-243ENST00000556671 MAP3K7O43318 606 aa10.17□□□□□ -0.78
ATXN3-243ENST00000556671 PLCB2Q00722 1185 aa10.17□□□□□ -0.78
ATXN3-243ENST00000556671 TSR1Q2NL82 804 aaKnown RBP10.17□□□□□ -0.78
ATXN3-243ENST00000556671 PRIM1P49642 420 aaKnown RBP10.16□□□□□ -0.78
ATXN3-243ENST00000556671 GOLGA8CPA6NN73 597 aa10.15□□□□□ -0.78
ATXN3-243ENST00000556671 TRIM6-TRIM34B2RNG4 842 aa10.15□□□□□ -0.78
ATXN3-243ENST00000556671 THSD4Q6ZMP0 1018 aa10.15□□□□□ -0.78
ATXN3-243ENST00000556671 KCNV2Q8TDN2 545 aa10.15□□□□□ -0.78
ATXN3-243ENST00000556671 ARHGEF1Q92888 912 aaKnown RBP10.15□□□□□ -0.78
ATXN3-243ENST00000556671 WNT2BQ93097 391 aa10.15□□□□□ -0.78
ATXN3-243ENST00000556671 KIAA1468Q9P260 1216 aa10.15□□□□□ -0.78
ATXN3-243ENST00000556671 OSBPP22059 807 aa10.14□□□□□ -0.79
ATXN3-243ENST00000556671 LAPTM4BQ86VI4 370 aa10.12□□□□□ -0.79
ATXN3-243ENST00000556671 PTPN5P54829 565 aa10.11□□□□□ -0.79
ATXN3-243ENST00000556671 CERKQ8TCT0 537 aa10.1□□□□□ -0.79
ATXN3-243ENST00000556671 PLA2G2EQ9NZK7 142 aa10.1□□□□□ -0.79
ATXN3-243ENST00000556671 TSKSQ9UJT2 592 aa10.09□□□□□ -0.79
ATXN3-243ENST00000556671 ANKK1Q8NFD2 765 aa10.08□□□□□ -0.8
ATXN3-243ENST00000556671 CDHR5Q9HBB8 845 aa10.08□□□□□ -0.8
ATXN3-243ENST00000556671 SEPT9Q9UHD8 586 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-243ENST00000556671 PRSS12P56730 875 aa10.07□□□□□ -0.8
ATXN3-243ENST00000556671 P3H3Q8IVL6 736 aa10.07□□□□□ -0.8
ATXN3-243ENST00000556671 CDCA7LQ96GN5 454 aa10.07□□□□□ -0.8
ATXN3-243ENST00000556671 ZFRQ96KR1 1074 aaKnown RBP10.07□□□□□ -0.8
ATXN3-243ENST00000556671 FAM98CQ17RN3 349 aaKnown RBP10.06□□□□□ -0.8
ATXN3-243ENST00000556671 PACS2Q86VP3 889 aa10.06□□□□□ -0.8
ATXN3-243ENST00000556671 MLLT3P42568 568 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-243ENST00000556671 FAM198AQ9UFP1 575 aa10.05□□□□□ -0.8
ATXN3-243ENST00000556671 SOWAHBA6NEL2 793 aa10.04□□□□□ -0.8
ATXN3-243ENST00000556671 BCAMP50895 628 aa10.03□□□□□ -0.8
ATXN3-243ENST00000556671 RBM27Q9P2N5 1060 aaKnown RBP10.03□□□□□ -0.8
ATXN3-243ENST00000556671 NPDC1Q9NQX5 325 aaPredicted RBP10.01□□□□□ -0.81
ATXN3-243ENST00000556671 C3orf80F5H4A9 247 aa9.99□□□□□ -0.81
ATXN3-243ENST00000556671 TATDN2Q93075 761 aa9.99□□□□□ -0.81
ATXN3-243ENST00000556671 NBPF26B4DH59 902 aa9.98□□□□□ -0.81
ATXN3-243ENST00000556671 SMAPO00193 183 aa9.98□□□□□ -0.81
ATXN3-243ENST00000556671 HAP1P54257 671 aaPredicted RBP9.98□□□□□ -0.81
ATXN3-243ENST00000556671 TTC13Q8NBP0 860 aa9.98□□□□□ -0.81
ATXN3-243ENST00000556671 LRCH3Q96II8 777 aa9.98□□□□□ -0.81
ATXN3-243ENST00000556671 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.98□□□□□ -0.81
ATXN3-243ENST00000556671 IFFO2Q5TF58 517 aa9.97□□□□□ -0.81
ATXN3-243ENST00000556671 PNMA3Q9UL41 463 aa9.97□□□□□ -0.81
ATXN3-243ENST00000556671 SEMA3EO15041 775 aa9.96□□□□□ -0.82
ATXN3-243ENST00000556671 PADI6Q6TGC4 694 aa9.96□□□□□ -0.82
ATXN3-243ENST00000556671 NYAP1Q6ZVC0 841 aa9.96□□□□□ -0.82
ATXN3-243ENST00000556671 WBP1LQ9NX94 342 aa9.96□□□□□ -0.82
ATXN3-243ENST00000556671 NUDT18Q6ZVK8 323 aa9.95□□□□□ -0.82
ATXN3-243ENST00000556671 TSR3Q9UJK0 312 aaKnown RBP9.95□□□□□ -0.82
ATXN3-243ENST00000556671 HPS5Q9UPZ3 1129 aa9.94□□□□□ -0.82
ATXN3-243ENST00000556671 PTGDRQ13258 359 aa9.93□□□□□ -0.82
ATXN3-243ENST00000556671 SAMD7Q7Z3H4 446 aa9.92□□□□□ -0.82
ATXN3-243ENST00000556671 ITGBL1O95965 494 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-243ENST00000556671 KDM2AQ9Y2K7 1162 aa9.91□□□□□ -0.82
ATXN3-243ENST00000556671 TESPA1A2RU30 521 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-243ENST00000556671 NUTM2FA1L443 756 aa9.88□□□□□ -0.83
ATXN3-243ENST00000556671 PPP4CP60510 307 aa9.88□□□□□ -0.83
ATXN3-243ENST00000556671 EYA1Q99502 592 aa9.87□□□□□ -0.83
ATXN3-243ENST00000556671 A0A0G2JS52 829 aa9.86□□□□□ -0.83
ATXN3-243ENST00000556671 HDGFP51858 240 aaKnown RBP9.85□□□□□ -0.83
ATXN3-243ENST00000556671 FCHSD2O94868 740 aa9.84□□□□□ -0.83
ATXN3-243ENST00000556671 SMYD5Q6GMV2 418 aa9.84□□□□□ -0.83
ATXN3-243ENST00000556671 VSIG10Q8N0Z9 540 aa9.84□□□□□ -0.83
ATXN3-243ENST00000556671 SWT1Q5T5J6 900 aaKnown RBP9.83□□□□□ -0.84
ATXN3-243ENST00000556671 KCNC4Q03721 635 aa9.82□□□□□ -0.84
ATXN3-243ENST00000556671 RBM26Q5T8P6 1007 aaKnown RBP9.82□□□□□ -0.84
ATXN3-243ENST00000556671 ADGRG1Q9Y653 693 aa9.82□□□□□ -0.84
ATXN3-243ENST00000556671 RNF40O75150 1001 aa9.81□□□□□ -0.84
ATXN3-243ENST00000556671 RGS20O76081 388 aa9.81□□□□□ -0.84
ATXN3-243ENST00000556671 SLF2Q8IX21 1173 aa9.81□□□□□ -0.84
ATXN3-243ENST00000556671 RBM46Q8TBY0 533 aaKnown RBP9.8□□□□□ -0.84
ATXN3-243ENST00000556671 DNAJB2P25686 324 aa9.79□□□□□ -0.84
ATXN3-243ENST00000556671 HIC1Q14526 733 aa9.79□□□□□ -0.84
ATXN3-243ENST00000556671 NECTIN2Q92692 538 aa9.79□□□□□ -0.84
ATXN3-243ENST00000556671 APLP1P51693 650 aa9.78□□□□□ -0.84
ATXN3-243ENST00000556671 FAM161AQ3B820 660 aa9.78□□□□□ -0.84
ATXN3-243ENST00000556671 TJAP1Q5JTD0 557 aa9.78□□□□□ -0.84
ATXN3-243ENST00000556671 GPR37O15354 613 aa9.76□□□□□ -0.85
ATXN3-243ENST00000556671 SLC4A3P48751 1232 aa9.76□□□□□ -0.85
ATXN3-243ENST00000556671 TMEM134Q9H6X4 195 aa9.76□□□□□ -0.85
ATXN3-243ENST00000556671 RCCD1A6NED2 376 aa9.75□□□□□ -0.85
ATXN3-243ENST00000556671 MTRQ99707 1265 aa9.75□□□□□ -0.85
ATXN3-243ENST00000556671 GNPATO15228 680 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms