RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 TPD52L1Q16890 204 aaPredicted RBP13.38□□□□□ -0.27
SPTB-208ENST00000556626 PDE4AP27815 886 aa13.37□□□□□ -0.27
SPTB-208ENST00000556626 LMOD2Q6P5Q4 547 aa13.37□□□□□ -0.27
SPTB-208ENST00000556626 SF3A1Q15459 793 aaKnown RBP13.37□□□□□ -0.27
SPTB-208ENST00000556626 BAZ1AQ9NRL2 1556 aaPredicted RBP13.36□□□□□ -0.27
SPTB-208ENST00000556626 CWC15Q9P013 229 aaKnown RBP13.36□□□□□ -0.27
SPTB-208ENST00000556626 PES1O00541 588 aaKnown RBP13.36□□□□□ -0.27
SPTB-208ENST00000556626 NOL8Q76FK4 1167 aaKnown RBP13.36□□□□□ -0.27
SPTB-208ENST00000556626 TPM2P07951 284 aa13.36□□□□□ -0.27
SPTB-208ENST00000556626 U2AF1L5P0DN76 240 aaPredicted RBP13.36□□□□□ -0.27
SPTB-208ENST00000556626 U2AF1Q01081 240 aaKnown RBP eCLIP13.36□□□□□ -0.27
SPTB-208ENST00000556626 RAB3GAP2Q9H2M9 1393 aa13.35□□□□□ -0.27
SPTB-208ENST00000556626 KIF15Q9NS87 1388 aa13.35□□□□□ -0.27
SPTB-208ENST00000556626 ZBED9Q6R2W3 1325 aa13.35□□□□□ -0.27
SPTB-208ENST00000556626 PATL2C9JE40 543 aaKnown RBP13.35□□□□□ -0.27
SPTB-208ENST00000556626 ARGLU1Q9NWB6 273 aaPredicted RBP13.35□□□□□ -0.27
SPTB-208ENST00000556626 CHMP4CQ96CF2 233 aa13.35□□□□□ -0.27
SPTB-208ENST00000556626 PRM3Q9NNZ6 103 aa13.35□□□□□ -0.27
SPTB-208ENST00000556626 APPP05067 770 aa13.35□□□□□ -0.27
SPTB-208ENST00000556626 FOXD4L5Q5VV16 416 aaPredicted RBP13.34□□□□□ -0.27
SPTB-208ENST00000556626 FOXD4L4Q8WXT5 416 aaPredicted RBP13.34□□□□□ -0.27
SPTB-208ENST00000556626 RRP12Q5JTH9 1297 aaKnown RBP13.34□□□□□ -0.27
SPTB-208ENST00000556626 STK31Q9BXU1 1019 aa13.34□□□□□ -0.27
SPTB-208ENST00000556626 PDE4CQ08493 712 aa13.33□□□□□ -0.28
SPTB-208ENST00000556626 CCDC66A2RUB6 948 aa13.33□□□□□ -0.28
SPTB-208ENST00000556626 NACADO15069 1562 aa13.33□□□□□ -0.28
SPTB-208ENST00000556626 AK7Q96M32 723 aa13.33□□□□□ -0.28
SPTB-208ENST00000556626 GORABQ5T7V8 394 aa13.33□□□□□ -0.28
SPTB-208ENST00000556626 NLRP13Q86W25 1043 aa13.33□□□□□ -0.28
SPTB-208ENST00000556626 IPO7O95373 1038 aaKnown RBP13.32□□□□□ -0.28
SPTB-208ENST00000556626 HOMER1Q86YM7 354 aa13.32□□□□□ -0.28
SPTB-208ENST00000556626 HDGFL2Q7Z4V5 671 aaPredicted RBP13.32□□□□□ -0.28
SPTB-208ENST00000556626 ACBD3Q9H3P7 528 aa13.32□□□□□ -0.28
SPTB-208ENST00000556626 RUFY1Q96T51 708 aa13.32□□□□□ -0.28
SPTB-208ENST00000556626 HSP90B2PQ58FF3 399 aa13.31□□□□□ -0.28
SPTB-208ENST00000556626 DIAPH3Q9NSV4 1193 aa13.3□□□□□ -0.28
SPTB-208ENST00000556626 ABCC8Q09428 1581 aa13.3□□□□□ -0.28
SPTB-208ENST00000556626 HOOK1Q9UJC3 728 aaKnown RBP13.3□□□□□ -0.28
SPTB-208ENST00000556626 FAM184AQ8NB25 1140 aa13.29□□□□□ -0.28
SPTB-208ENST00000556626 REC8O95072 547 aa13.29□□□□□ -0.28
SPTB-208ENST00000556626 ANKRD20A12PQ8NF67 263 aa13.28□□□□□ -0.28
SPTB-208ENST00000556626 SOX12O15370 315 aa13.28□□□□□ -0.28
SPTB-208ENST00000556626 NASPP49321 788 aaPredicted RBP13.28□□□□□ -0.28
SPTB-208ENST00000556626 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
SPTB-208ENST00000556626 FMN1Q68DA7 1419 aa13.28□□□□□ -0.28
SPTB-208ENST00000556626 CHMP3Q9Y3E7 222 aa13.28□□□□□ -0.28
SPTB-208ENST00000556626 SLC4A3P48751 1232 aa13.27□□□□□ -0.28
SPTB-208ENST00000556626 LMOD3Q0VAK6 560 aa13.27□□□□□ -0.28
SPTB-208ENST00000556626 CDR1P51861 262 aa13.27□□□□□ -0.29
SPTB-208ENST00000556626 CLUAP1Q96AJ1 413 aa13.27□□□□□ -0.29
SPTB-208ENST00000556626 IFT57Q9NWB7 429 aa13.27□□□□□ -0.29
SPTB-208ENST00000556626 CCDC39Q9UFE4 941 aa13.27□□□□□ -0.29
SPTB-208ENST00000556626 MYBBP1AQ9BQG0 1328 aaKnown RBP13.27□□□□□ -0.29
SPTB-208ENST00000556626 PRDM2Q13029 1718 aa13.27□□□□□ -0.29
SPTB-208ENST00000556626 RRP9O43818 475 aaKnown RBP13.27□□□□□ -0.29
SPTB-208ENST00000556626 RDXP35241 583 aaKnown RBP13.27□□□□□ -0.29
SPTB-208ENST00000556626 FOXD4L6Q3SYB3 417 aaPredicted RBP13.27□□□□□ -0.29
SPTB-208ENST00000556626 FOXD4L3Q6VB84 417 aaPredicted RBP13.27□□□□□ -0.29
SPTB-208ENST00000556626 HDGFP51858 240 aaKnown RBP13.26□□□□□ -0.29
SPTB-208ENST00000556626 CGNL1Q0VF96 1302 aa13.25□□□□□ -0.29
SPTB-208ENST00000556626 SLC4A10Q6U841 1118 aa13.25□□□□□ -0.29
SPTB-208ENST00000556626 CHMP5Q9NZZ3 219 aa13.25□□□□□ -0.29
SPTB-208ENST00000556626 H0YHG0 523 aa13.24□□□□□ -0.29
SPTB-208ENST00000556626 DCTN1Q14203 1278 aa13.24□□□□□ -0.29
SPTB-208ENST00000556626 CCDC191Q8NCU4 936 aa13.24□□□□□ -0.29
SPTB-208ENST00000556626 ANKRD45Q5TZF3 282 aa13.24□□□□□ -0.29
SPTB-208ENST00000556626 MCTP1Q6DN14 999 aa13.24□□□□□ -0.29
SPTB-208ENST00000556626 TAF7LQ5H9L4 462 aa13.24□□□□□ -0.29
SPTB-208ENST00000556626 CCDC146Q8IYE0 955 aa13.24□□□□□ -0.29
SPTB-208ENST00000556626 MRE11P49959 708 aa13.23□□□□□ -0.29
SPTB-208ENST00000556626 SAFB2Q14151 953 aaKnown RBP eCLIP13.23□□□□□ -0.29
SPTB-208ENST00000556626 MNS1Q8NEH6 495 aa13.23□□□□□ -0.29
SPTB-208ENST00000556626 NAT10Q9H0A0 1025 aaKnown RBP13.23□□□□□ -0.29
SPTB-208ENST00000556626 RILPL2Q969X0 211 aa13.23□□□□□ -0.29
SPTB-208ENST00000556626 NUCB2P80303 420 aa13.23□□□□□ -0.29
SPTB-208ENST00000556626 PKD2Q13563 968 aa13.22□□□□□ -0.29
SPTB-208ENST00000556626 FOXD1Q16676 465 aa13.22□□□□□ -0.29
SPTB-208ENST00000556626 SASS6Q6UVJ0 657 aa13.22□□□□□ -0.29
SPTB-208ENST00000556626 ROCK1Q13464 1354 aa13.21□□□□□ -0.29
SPTB-208ENST00000556626 E9PSI1 815 aa13.21□□□□□ -0.29
SPTB-208ENST00000556626 HMGN5P82970 282 aaKnown RBP13.21□□□□□ -0.3
SPTB-208ENST00000556626 AKAP17AQ02040 695 aaKnown RBP13.21□□□□□ -0.3
SPTB-208ENST00000556626 NFKBIBQ15653 356 aa13.21□□□□□ -0.3
SPTB-208ENST00000556626 LRRFIP1Q32MZ4 808 aaKnown RBP13.2□□□□□ -0.3
SPTB-208ENST00000556626 MPHOSPH9Q99550 1183 aa13.2□□□□□ -0.3
SPTB-208ENST00000556626 TERF2IPQ9NYB0 399 aa13.2□□□□□ -0.3
SPTB-208ENST00000556626 PCMTD1Q96MG8 357 aaPredicted RBP13.2□□□□□ -0.3
SPTB-208ENST00000556626 LEKR1Q6ZMV7 388 aa13.19□□□□□ -0.3
SPTB-208ENST00000556626 R3HCC1Q9Y3T6 440 aaKnown RBP13.19□□□□□ -0.3
SPTB-208ENST00000556626 ZKSCAN1P17029 563 aaPredicted RBP13.19□□□□□ -0.3
SPTB-208ENST00000556626 BICD2Q8TD16 824 aa13.19□□□□□ -0.3
SPTB-208ENST00000556626 RUFY2Q8WXA3 655 aa13.19□□□□□ -0.3
SPTB-208ENST00000556626 MARCH6O60337 910 aa13.19□□□□□ -0.3
SPTB-208ENST00000556626 VPS53Q5VIR6 699 aa13.19□□□□□ -0.3
SPTB-208ENST00000556626 TAF3Q5VWG9 929 aa13.19□□□□□ -0.3
SPTB-208ENST00000556626 ERCC4Q92889 916 aaPredicted RBP13.19□□□□□ -0.3
SPTB-208ENST00000556626 CRBNQ96SW2 442 aa13.18□□□□□ -0.3
SPTB-208ENST00000556626 ZKSCAN2Q63HK3 967 aa13.18□□□□□ -0.3
SPTB-208ENST00000556626 TRIM29Q14134 588 aa13.18□□□□□ -0.3
SPTB-208ENST00000556626 NUP155O75694 1391 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms