RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 JPH4Q96JJ6 628 aa10.64□□□□□ -0.71
CPSF2-205ENST00000556622 BCAMP50895 628 aa10.63□□□□□ -0.71
CPSF2-205ENST00000556622 PPP1R15BQ5SWA1 713 aa10.62□□□□□ -0.71
CPSF2-205ENST00000556622 PAXIP1Q6ZW49 1069 aaPredicted RBP10.62□□□□□ -0.71
CPSF2-205ENST00000556622 ZDHHC16Q969W1 377 aa10.62□□□□□ -0.71
CPSF2-205ENST00000556622 CRISPLD2Q9H0B8 497 aa10.62□□□□□ -0.71
CPSF2-205ENST00000556622 ANO8Q9HCE9 1232 aaPredicted RBP10.62□□□□□ -0.71
CPSF2-205ENST00000556622 PROX2Q3B8N5 592 aa10.61□□□□□ -0.71
CPSF2-205ENST00000556622 EVI5O60447 810 aa10.59□□□□□ -0.71
CPSF2-205ENST00000556622 ANKK1Q8NFD2 765 aa10.59□□□□□ -0.71
CPSF2-205ENST00000556622 COL9A1P20849 921 aa10.57□□□□□ -0.72
CPSF2-205ENST00000556622 PLCB2Q00722 1185 aa10.57□□□□□ -0.72
CPSF2-205ENST00000556622 CFAP44Q96MT7 982 aa10.57□□□□□ -0.72
CPSF2-205ENST00000556622 NCKAP5LQ9HCH0 1330 aa10.56□□□□□ -0.72
CPSF2-205ENST00000556622 RABGEF1Q9UJ41 708 aa10.55□□□□□ -0.72
CPSF2-205ENST00000556622 SHROOM4Q9ULL8 1493 aa10.55□□□□□ -0.72
CPSF2-205ENST00000556622 SOWAHBA6NEL2 793 aa10.54□□□□□ -0.72
CPSF2-205ENST00000556622 PPP1R3GB7ZBB8 358 aa10.54□□□□□ -0.72
CPSF2-205ENST00000556622 WBP1LQ9NX94 342 aa10.53□□□□□ -0.72
CPSF2-205ENST00000556622 PDE4AP27815 886 aa10.51□□□□□ -0.73
CPSF2-205ENST00000556622 CADPS2Q86UW7 1296 aa10.51□□□□□ -0.73
CPSF2-205ENST00000556622 PCDHGA10Q9Y5H3 936 aa10.51□□□□□ -0.73
CPSF2-205ENST00000556622 KCNC4Q03721 635 aa10.5□□□□□ -0.73
CPSF2-205ENST00000556622 MFSD10Q14728 455 aa10.49□□□□□ -0.73
CPSF2-205ENST00000556622 ZFRQ96KR1 1074 aaKnown RBP10.49□□□□□ -0.73
CPSF2-205ENST00000556622 KIAA1468Q9P260 1216 aa10.48□□□□□ -0.73
CPSF2-205ENST00000556622 TRAF7Q6Q0C0 670 aa10.47□□□□□ -0.73
CPSF2-205ENST00000556622 SEPT9Q9UHD8 586 aaPredicted RBP10.47□□□□□ -0.73
CPSF2-205ENST00000556622 GFRA3O60609 400 aa10.46□□□□□ -0.73
CPSF2-205ENST00000556622 LAPTM4BQ86VI4 370 aa10.46□□□□□ -0.73
CPSF2-205ENST00000556622 EIF4G1Q04637 1599 aaKnown RBP10.44□□□□□ -0.74
CPSF2-205ENST00000556622 MAP3K9P80192 1104 aa10.44□□□□□ -0.74
CPSF2-205ENST00000556622 LAPTM4AQ15012 233 aa10.44□□□□□ -0.74
CPSF2-205ENST00000556622 NYAP1Q6ZVC0 841 aa10.44□□□□□ -0.74
CPSF2-205ENST00000556622 TSHZ2Q9NRE2 1034 aa10.44□□□□□ -0.74
CPSF2-205ENST00000556622 EMILIN3Q9NT22 766 aa10.44□□□□□ -0.74
CPSF2-205ENST00000556622 CC2D2AQ9P2K1 1620 aa10.43□□□□□ -0.74
CPSF2-205ENST00000556622 LARP6Q9BRS8 491 aaKnown RBP10.41□□□□□ -0.74
CPSF2-205ENST00000556622 TYW1BQ6NUM6 668 aa10.4□□□□□ -0.74
CPSF2-205ENST00000556622 CECR2Q9BXF3 1484 aa10.4□□□□□ -0.74
CPSF2-205ENST00000556622 DDX27Q96GQ7 796 aaKnown RBP10.39□□□□□ -0.75
CPSF2-205ENST00000556622 HPS5Q9UPZ3 1129 aa10.39□□□□□ -0.75
CPSF2-205ENST00000556622 CAMK2BQ13554 666 aa10.37□□□□□ -0.75
CPSF2-205ENST00000556622 FBXW7Q969H0 707 aa10.37□□□□□ -0.75
CPSF2-205ENST00000556622 TSR3Q9UJK0 312 aaKnown RBP10.37□□□□□ -0.75
CPSF2-205ENST00000556622 PHF14O94880 888 aa10.36□□□□□ -0.75
CPSF2-205ENST00000556622 PRKD2Q9BZL6 878 aa10.36□□□□□ -0.75
CPSF2-205ENST00000556622 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.36□□□□□ -0.75
CPSF2-205ENST00000556622 FAM98CQ17RN3 349 aaKnown RBP10.35□□□□□ -0.75
CPSF2-205ENST00000556622 TRIM6-TRIM34B2RNG4 842 aa10.34□□□□□ -0.75
CPSF2-205ENST00000556622 NRG2O14511 850 aaPredicted RBP10.34□□□□□ -0.75
CPSF2-205ENST00000556622 C6orf132Q5T0Z8 1188 aa10.34□□□□□ -0.75
CPSF2-205ENST00000556622 LRCH3Q96II8 777 aa10.34□□□□□ -0.75
CPSF2-205ENST00000556622 ONECUT3O60422 494 aaPredicted RBP10.33□□□□□ -0.76
CPSF2-205ENST00000556622 TJAP1Q5JTD0 557 aa10.31□□□□□ -0.76
CPSF2-205ENST00000556622 ARIH1Q9Y4X5 557 aaPredicted RBP10.31□□□□□ -0.76
CPSF2-205ENST00000556622 HAP1P54257 671 aaPredicted RBP10.29□□□□□ -0.76
CPSF2-205ENST00000556622 ZNF787Q6DD87 383 aa10.29□□□□□ -0.76
CPSF2-205ENST00000556622 RBM33Q96EV2 1170 aaKnown RBP10.29□□□□□ -0.76
CPSF2-205ENST00000556622 VSIG10Q8N0Z9 540 aa10.28□□□□□ -0.76
CPSF2-205ENST00000556622 PPP1R18Q6NYC8 613 aa10.27□□□□□ -0.77
CPSF2-205ENST00000556622 WDR70Q9NW82 654 aa10.27□□□□□ -0.77
CPSF2-205ENST00000556622 E2F4Q16254 413 aa10.26□□□□□ -0.77
CPSF2-205ENST00000556622 ZNF775Q96BV0 537 aaPredicted RBP10.26□□□□□ -0.77
CPSF2-205ENST00000556622 TSKSQ9UJT2 592 aa10.26□□□□□ -0.77
CPSF2-205ENST00000556622 PPP4CP60510 307 aa10.25□□□□□ -0.77
CPSF2-205ENST00000556622 EPAS1Q99814 870 aa10.25□□□□□ -0.77
CPSF2-205ENST00000556622 KDM2AQ9Y2K7 1162 aa10.25□□□□□ -0.77
CPSF2-205ENST00000556622 MTRQ99707 1265 aa10.24□□□□□ -0.77
CPSF2-205ENST00000556622 ZNF516Q92618 1163 aa10.23□□□□□ -0.77
CPSF2-205ENST00000556622 V9GY48 417 aaPredicted RBP10.23□□□□□ -0.77
CPSF2-205ENST00000556622 PDZRN3Q9UPQ7 1066 aa10.22□□□□□ -0.77
CPSF2-205ENST00000556622 NCAPD3P42695 1498 aa10.22□□□□□ -0.77
CPSF2-205ENST00000556622 BAZ1AQ9NRL2 1556 aaPredicted RBP10.22□□□□□ -0.77
CPSF2-205ENST00000556622 SMARCA4P51532 1647 aa10.22□□□□□ -0.77
CPSF2-205ENST00000556622 SMAPO00193 183 aa10.21□□□□□ -0.77
CPSF2-205ENST00000556622 DPYSL4O14531 572 aa10.21□□□□□ -0.77
CPSF2-205ENST00000556622 SAMD7Q7Z3H4 446 aa10.21□□□□□ -0.77
CPSF2-205ENST00000556622 DDX12PQ92771 950 aa10.21□□□□□ -0.77
CPSF2-205ENST00000556622 ATAD2BQ9ULI0 1458 aa10.21□□□□□ -0.78
CPSF2-205ENST00000556622 TSR1Q2NL82 804 aaKnown RBP10.2□□□□□ -0.78
CPSF2-205ENST00000556622 C3orf80F5H4A9 247 aa10.19□□□□□ -0.78
CPSF2-205ENST00000556622 IL21Q9HBE4 155 aa10.19□□□□□ -0.78
CPSF2-205ENST00000556622 SMARCA2P51531 1590 aa10.18□□□□□ -0.78
CPSF2-205ENST00000556622 NKX2-3Q8TAU0 364 aa10.18□□□□□ -0.78
CPSF2-205ENST00000556622 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.18□□□□□ -0.78
CPSF2-205ENST00000556622 FAM198AQ9UFP1 575 aa10.18□□□□□ -0.78
CPSF2-205ENST00000556622 MROH2BQ7Z745 1585 aa10.18□□□□□ -0.78
CPSF2-205ENST00000556622 PACS2Q86VP3 889 aa10.17□□□□□ -0.78
CPSF2-205ENST00000556622 ARHGEF1Q92888 912 aaKnown RBP10.17□□□□□ -0.78
CPSF2-205ENST00000556622 SPDYE16A6NNV3 312 aaPredicted RBP10.15□□□□□ -0.78
CPSF2-205ENST00000556622 PDIA6Q15084 440 aa10.14□□□□□ -0.79
CPSF2-205ENST00000556622 P3H3Q8IVL6 736 aa10.14□□□□□ -0.79
CPSF2-205ENST00000556622 KCNV2Q8TDN2 545 aa10.14□□□□□ -0.79
CPSF2-205ENST00000556622 BAZ1BQ9UIG0 1483 aaKnown RBP10.13□□□□□ -0.79
CPSF2-205ENST00000556622 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
CPSF2-205ENST00000556622 MAP3K7O43318 606 aa10.12□□□□□ -0.79
CPSF2-205ENST00000556622 APLP1P51693 650 aa10.12□□□□□ -0.79
CPSF2-205ENST00000556622 NBR1Q14596 966 aa10.12□□□□□ -0.79
CPSF2-205ENST00000556622 CDCA7LQ96GN5 454 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms