RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 GNPATO15228 680 aa10.19□□□□□ -0.78
PCNX1-212ENST00000556516 C6orf132Q5T0Z8 1188 aa10.19□□□□□ -0.78
PCNX1-212ENST00000556516 HIC1Q14526 733 aa10.17□□□□□ -0.78
PCNX1-212ENST00000556516 PPP4R3BQ5MIZ7 849 aa10.17□□□□□ -0.78
PCNX1-212ENST00000556516 FAM163AQ96GL9 167 aaPredicted RBP10.17□□□□□ -0.78
PCNX1-212ENST00000556516 FAM161AQ3B820 660 aa10.16□□□□□ -0.78
PCNX1-212ENST00000556516 CCDC102AQ96A19 550 aa10.16□□□□□ -0.78
PCNX1-212ENST00000556516 COL9A1P20849 921 aa10.15□□□□□ -0.78
PCNX1-212ENST00000556516 BRPF1P55201 1214 aaPredicted RBP10.15□□□□□ -0.78
PCNX1-212ENST00000556516 MAP2K5Q13163 448 aa10.14□□□□□ -0.79
PCNX1-212ENST00000556516 NEUROD2Q15784 382 aa10.14□□□□□ -0.79
PCNX1-212ENST00000556516 VARS2Q5ST30 1063 aaKnown RBP10.14□□□□□ -0.79
PCNX1-212ENST00000556516 AK7Q96M32 723 aa10.14□□□□□ -0.79
PCNX1-212ENST00000556516 ERBB3P21860 1342 aa10.13□□□□□ -0.79
PCNX1-212ENST00000556516 EMP3P54852 163 aa10.13□□□□□ -0.79
PCNX1-212ENST00000556516 PADI6Q6TGC4 694 aa10.13□□□□□ -0.79
PCNX1-212ENST00000556516 IRF6O14896 467 aa10.12□□□□□ -0.79
PCNX1-212ENST00000556516 TRIM66O15016 1216 aa10.12□□□□□ -0.79
PCNX1-212ENST00000556516 BCL2L12Q9HB09 334 aa10.12□□□□□ -0.79
PCNX1-212ENST00000556516 GPBP1L1Q9HC44 474 aaPredicted RBP10.12□□□□□ -0.79
PCNX1-212ENST00000556516 FAM205CA6NFA0 338 aa10.11□□□□□ -0.79
PCNX1-212ENST00000556516 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
PCNX1-212ENST00000556516 KCNK17Q96T54 332 aa10.11□□□□□ -0.79
PCNX1-212ENST00000556516 MINK1Q8N4C8 1332 aaPredicted RBP10.1□□□□□ -0.79
PCNX1-212ENST00000556516 PSDA5PKW4 1024 aaPredicted RBP10.09□□□□□ -0.79
PCNX1-212ENST00000556516 PSEN2P49810 448 aa10.09□□□□□ -0.79
PCNX1-212ENST00000556516 NLRP7Q8WX94 980 aa10.09□□□□□ -0.79
PCNX1-212ENST00000556516 AXIN2Q9Y2T1 843 aa10.09□□□□□ -0.79
PCNX1-212ENST00000556516 POTEB3A0JP26 581 aa10.08□□□□□ -0.8
PCNX1-212ENST00000556516 PTPREP23469 700 aa10.08□□□□□ -0.8
PCNX1-212ENST00000556516 PDE4DQ08499 809 aa10.08□□□□□ -0.8
PCNX1-212ENST00000556516 POTEBQ6S5H4 581 aa10.08□□□□□ -0.8
PCNX1-212ENST00000556516 POTEEQ6S8J3 1075 aa10.08□□□□□ -0.8
PCNX1-212ENST00000556516 FAM198AQ9UFP1 575 aa10.08□□□□□ -0.8
PCNX1-212ENST00000556516 CDCA7LQ96GN5 454 aa10.07□□□□□ -0.8
PCNX1-212ENST00000556516 C3orf80F5H4A9 247 aa10.06□□□□□ -0.8
PCNX1-212ENST00000556516 PROX2Q3B8N5 592 aa10.06□□□□□ -0.8
PCNX1-212ENST00000556516 PHOX2BQ99453 314 aa10.06□□□□□ -0.8
PCNX1-212ENST00000556516 PPP1R3GB7ZBB8 358 aa10.05□□□□□ -0.8
PCNX1-212ENST00000556516 PRSS12P56730 875 aa10.05□□□□□ -0.8
PCNX1-212ENST00000556516 TSKSQ9UJT2 592 aa10.05□□□□□ -0.8
PCNX1-212ENST00000556516 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
PCNX1-212ENST00000556516 CERKQ8TCT0 537 aa10.03□□□□□ -0.8
PCNX1-212ENST00000556516 HS3ST6Q96QI5 342 aa10.03□□□□□ -0.8
PCNX1-212ENST00000556516 ADGRG1Q9Y653 693 aa10.03□□□□□ -0.8
PCNX1-212ENST00000556516 TTC13Q8NBP0 860 aa10.02□□□□□ -0.81
PCNX1-212ENST00000556516 TTLL12Q14166 644 aaPredicted RBP10.01□□□□□ -0.81
PCNX1-212ENST00000556516 PARP9Q8IXQ6 854 aa10.01□□□□□ -0.81
PCNX1-212ENST00000556516 REPIN1Q9BWE0 567 aaKnown RBP10.01□□□□□ -0.81
PCNX1-212ENST00000556516 KDM4CQ9H3R0 1056 aa10.01□□□□□ -0.81
PCNX1-212ENST00000556516 SMAPO00193 183 aa10□□□□□ -0.81
PCNX1-212ENST00000556516 METTL3Q86U44 580 aaKnown RBP10□□□□□ -0.81
PCNX1-212ENST00000556516 MDM2Q00987 491 aaPredicted RBP9.99□□□□□ -0.81
PCNX1-212ENST00000556516 AMHR2Q16671 573 aa9.99□□□□□ -0.81
PCNX1-212ENST00000556516 TRIM6-TRIM34B2RNG4 842 aa9.98□□□□□ -0.81
PCNX1-212ENST00000556516 ARHGAP33O14559 1287 aa9.98□□□□□ -0.81
PCNX1-212ENST00000556516 ZBED2Q9BTP6 218 aa9.98□□□□□ -0.81
PCNX1-212ENST00000556516 RBM27Q9P2N5 1060 aaKnown RBP9.98□□□□□ -0.81
PCNX1-212ENST00000556516 NUDT18Q6ZVK8 323 aa9.97□□□□□ -0.81
PCNX1-212ENST00000556516 PXYLP1Q8TE99 480 aa9.97□□□□□ -0.81
PCNX1-212ENST00000556516 KCNH8Q96L42 1107 aa9.97□□□□□ -0.81
PCNX1-212ENST00000556516 GIGYF2Q6Y7W6 1299 aaKnown RBP9.96□□□□□ -0.82
PCNX1-212ENST00000556516 ZNF687Q8N1G0 1237 aa9.96□□□□□ -0.82
PCNX1-212ENST00000556516 PNMA3Q9UL41 463 aa9.96□□□□□ -0.82
PCNX1-212ENST00000556516 IL27Q8NEV9 243 aa9.95□□□□□ -0.82
PCNX1-212ENST00000556516 KIAA1468Q9P260 1216 aa9.95□□□□□ -0.82
PCNX1-212ENST00000556516 TATDN2Q93075 761 aa9.94□□□□□ -0.82
PCNX1-212ENST00000556516 FAM117AQ9C073 453 aa9.94□□□□□ -0.82
PCNX1-212ENST00000556516 SEPT9Q9UHD8 586 aaPredicted RBP9.94□□□□□ -0.82
PCNX1-212ENST00000556516 OATP04181 439 aa9.93□□□□□ -0.82
PCNX1-212ENST00000556516 MS4A1P11836 297 aa9.93□□□□□ -0.82
PCNX1-212ENST00000556516 EYA1Q99502 592 aa9.93□□□□□ -0.82
PCNX1-212ENST00000556516 RCCD1A6NED2 376 aa9.92□□□□□ -0.82
PCNX1-212ENST00000556516 NBPF26B4DH59 902 aa9.92□□□□□ -0.82
PCNX1-212ENST00000556516 PACS2Q86VP3 889 aa9.92□□□□□ -0.82
PCNX1-212ENST00000556516 RBM46Q8TBY0 533 aaKnown RBP9.92□□□□□ -0.82
PCNX1-212ENST00000556516 PBX2P40425 430 aa9.9□□□□□ -0.82
PCNX1-212ENST00000556516 TMUB1Q9BVT8 246 aa9.9□□□□□ -0.82
PCNX1-212ENST00000556516 GPCPD1Q9NPB8 672 aa9.9□□□□□ -0.82
PCNX1-212ENST00000556516 VPS9D1Q9Y2B5 631 aa9.9□□□□□ -0.82
PCNX1-212ENST00000556516 CLCN1P35523 988 aa9.89□□□□□ -0.83
PCNX1-212ENST00000556516 TMEM132AQ24JP5 1023 aa9.89□□□□□ -0.83
PCNX1-212ENST00000556516 PLEKHG3A1L390 1219 aa9.87□□□□□ -0.83
PCNX1-212ENST00000556516 LSM11P83369 360 aaKnown RBP eCLIP9.87□□□□□ -0.83
PCNX1-212ENST00000556516 RABGEF1Q9UJ41 708 aa9.87□□□□□ -0.83
PCNX1-212ENST00000556516 SSTR3P32745 418 aaPredicted RBP9.86□□□□□ -0.83
PCNX1-212ENST00000556516 FAM217BQ9NTX9 383 aaPredicted RBP9.86□□□□□ -0.83
PCNX1-212ENST00000556516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.85□□□□□ -0.83
PCNX1-212ENST00000556516 ANKRD13DQ6ZTN6 518 aa9.85□□□□□ -0.83
PCNX1-212ENST00000556516 ONECUT3O60422 494 aaPredicted RBP9.84□□□□□ -0.83
PCNX1-212ENST00000556516 DNAJB2P25686 324 aa9.84□□□□□ -0.83
PCNX1-212ENST00000556516 SLC4A5Q9BY07 1137 aa9.84□□□□□ -0.83
PCNX1-212ENST00000556516 ADGRD1Q6QNK2 874 aa9.83□□□□□ -0.84
PCNX1-212ENST00000556516 TMEM134Q9H6X4 195 aa9.83□□□□□ -0.84
PCNX1-212ENST00000556516 DDX11L8A8MPP1 907 aa9.82□□□□□ -0.84
PCNX1-212ENST00000556516 SWT1Q5T5J6 900 aaKnown RBP9.82□□□□□ -0.84
PCNX1-212ENST00000556516 BEGAINQ9BUH8 593 aa9.82□□□□□ -0.84
PCNX1-212ENST00000556516 KRTAP3-3Q9BYR6 98 aa9.81□□□□□ -0.84
PCNX1-212ENST00000556516 KRTAP3-2Q9BYR7 98 aa9.81□□□□□ -0.84
PCNX1-212ENST00000556516 DAXXQ9UER7 740 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms