RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 STAC3Q96MF2 364 aa7.51□□□□□ -1.21
TGFB3-205ENST00000556507 NBR1Q14596 966 aa7.5□□□□□ -1.21
TGFB3-205ENST00000556507 ARHGEF1Q92888 912 aaKnown RBP7.5□□□□□ -1.21
TGFB3-205ENST00000556507 RBM33Q96EV2 1170 aaKnown RBP7.5□□□□□ -1.21
TGFB3-205ENST00000556507 SLC4A5Q9BY07 1137 aa7.5□□□□□ -1.21
TGFB3-205ENST00000556507 VPS9D1Q9Y2B5 631 aa7.5□□□□□ -1.21
TGFB3-205ENST00000556507 GRXCR2A6NFK2 248 aa7.49□□□□□ -1.21
TGFB3-205ENST00000556507 HRO43593 1189 aa7.49□□□□□ -1.21
TGFB3-205ENST00000556507 C6orf132Q5T0Z8 1188 aa7.49□□□□□ -1.21
TGFB3-205ENST00000556507 KCNV2Q8TDN2 545 aa7.49□□□□□ -1.21
TGFB3-205ENST00000556507 ZBED2Q9BTP6 218 aa7.49□□□□□ -1.21
TGFB3-205ENST00000556507 PPP1R3GB7ZBB8 358 aa7.48□□□□□ -1.21
TGFB3-205ENST00000556507 MAP3K7O43318 606 aa7.47□□□□□ -1.21
TGFB3-205ENST00000556507 P3H3Q8IVL6 736 aa7.47□□□□□ -1.21
TGFB3-205ENST00000556507 COL9A1P20849 921 aa7.46□□□□□ -1.22
TGFB3-205ENST00000556507 EN1Q05925 392 aaPredicted RBP7.46□□□□□ -1.22
TGFB3-205ENST00000556507 TSR1Q2NL82 804 aaKnown RBP7.44□□□□□ -1.22
TGFB3-205ENST00000556507 PROX2Q3B8N5 592 aa7.44□□□□□ -1.22
TGFB3-205ENST00000556507 BHMG1C9JSJ3 638 aaPredicted RBP7.43□□□□□ -1.22
TGFB3-205ENST00000556507 OSBPP22059 807 aa7.42□□□□□ -1.22
TGFB3-205ENST00000556507 PRIM1P49642 420 aaKnown RBP7.42□□□□□ -1.22
TGFB3-205ENST00000556507 MRPL50Q8N5N7 158 aaKnown RBP7.42□□□□□ -1.22
TGFB3-205ENST00000556507 NBPF3Q9H094 633 aa7.42□□□□□ -1.22
TGFB3-205ENST00000556507 RABGEF1Q9UJ41 708 aa7.42□□□□□ -1.22
TGFB3-205ENST00000556507 GOLGA8CPA6NN73 597 aa7.41□□□□□ -1.22
TGFB3-205ENST00000556507 KCTD12Q96CX2 325 aaKnown RBP7.41□□□□□ -1.22
TGFB3-205ENST00000556507 KDM2AQ9Y2K7 1162 aa7.41□□□□□ -1.22
TGFB3-205ENST00000556507 ONECUT3O60422 494 aaPredicted RBP7.4□□□□□ -1.22
TGFB3-205ENST00000556507 MLLT3P42568 568 aaPredicted RBP7.4□□□□□ -1.22
TGFB3-205ENST00000556507 KIAA1468Q9P260 1216 aa7.4□□□□□ -1.22
TGFB3-205ENST00000556507 TRIM6-TRIM34B2RNG4 842 aa7.39□□□□□ -1.23
TGFB3-205ENST00000556507 VSIG10Q8N0Z9 540 aa7.39□□□□□ -1.23
TGFB3-205ENST00000556507 CERKQ8TCT0 537 aa7.39□□□□□ -1.23
TGFB3-205ENST00000556507 HCSTQ9UBK5 93 aa7.39□□□□□ -1.23
TGFB3-205ENST00000556507 PACS2Q86VP3 889 aa7.37□□□□□ -1.23
TGFB3-205ENST00000556507 WNT2BQ93097 391 aa7.37□□□□□ -1.23
TGFB3-205ENST00000556507 CDHR5Q9HBB8 845 aa7.37□□□□□ -1.23
TGFB3-205ENST00000556507 SEMA3EO15041 775 aa7.36□□□□□ -1.23
TGFB3-205ENST00000556507 PRSS12P56730 875 aa7.36□□□□□ -1.23
TGFB3-205ENST00000556507 LAPTM4BQ86VI4 370 aa7.36□□□□□ -1.23
TGFB3-205ENST00000556507 CDCA7LQ96GN5 454 aa7.36□□□□□ -1.23
TGFB3-205ENST00000556507 SEPT9Q9UHD8 586 aaPredicted RBP7.35□□□□□ -1.23
TGFB3-205ENST00000556507 TSKSQ9UJT2 592 aa7.35□□□□□ -1.23
TGFB3-205ENST00000556507 PTPN5P54829 565 aa7.34□□□□□ -1.23
TGFB3-205ENST00000556507 THSD4Q6ZMP0 1018 aa7.34□□□□□ -1.23
TGFB3-205ENST00000556507 ANKK1Q8NFD2 765 aa7.33□□□□□ -1.24
TGFB3-205ENST00000556507 ZFRQ96KR1 1074 aaKnown RBP7.33□□□□□ -1.24
TGFB3-205ENST00000556507 FAM98CQ17RN3 349 aaKnown RBP7.32□□□□□ -1.24
TGFB3-205ENST00000556507 NPDC1Q9NQX5 325 aaPredicted RBP7.32□□□□□ -1.24
TGFB3-205ENST00000556507 NUTM2FA1L443 756 aa7.31□□□□□ -1.24
TGFB3-205ENST00000556507 SMYD5Q6GMV2 418 aa7.31□□□□□ -1.24
TGFB3-205ENST00000556507 RBM27Q9P2N5 1060 aaKnown RBP7.31□□□□□ -1.24
TGFB3-205ENST00000556507 FAM198AQ9UFP1 575 aa7.31□□□□□ -1.24
TGFB3-205ENST00000556507 TESPA1A2RU30 521 aaPredicted RBP7.3□□□□□ -1.24
TGFB3-205ENST00000556507 NBPF26B4DH59 902 aa7.3□□□□□ -1.24
TGFB3-205ENST00000556507 SMAPO00193 183 aa7.3□□□□□ -1.24
TGFB3-205ENST00000556507 PADI6Q6TGC4 694 aa7.3□□□□□ -1.24
TGFB3-205ENST00000556507 TATDN2Q93075 761 aa7.3□□□□□ -1.24
TGFB3-205ENST00000556507 PNMA3Q9UL41 463 aa7.3□□□□□ -1.24
TGFB3-205ENST00000556507 SOWAHBA6NEL2 793 aa7.28□□□□□ -1.24
TGFB3-205ENST00000556507 BCAMP50895 628 aa7.28□□□□□ -1.24
TGFB3-205ENST00000556507 PTGDRQ13258 359 aa7.28□□□□□ -1.24
TGFB3-205ENST00000556507 NUDT18Q6ZVK8 323 aa7.28□□□□□ -1.24
TGFB3-205ENST00000556507 C3orf80F5H4A9 247 aa7.27□□□□□ -1.25
TGFB3-205ENST00000556507 TTC13Q8NBP0 860 aa7.27□□□□□ -1.25
TGFB3-205ENST00000556507 LRCH3Q96II8 777 aa7.27□□□□□ -1.25
TGFB3-205ENST00000556507 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.27□□□□□ -1.25
TGFB3-205ENST00000556507 PLA2G2EQ9NZK7 142 aa7.27□□□□□ -1.25
TGFB3-205ENST00000556507 RBM26Q5T8P6 1007 aaKnown RBP7.26□□□□□ -1.25
TGFB3-205ENST00000556507 FCHSD2O94868 740 aa7.25□□□□□ -1.25
TGFB3-205ENST00000556507 HDGFP51858 240 aaKnown RBP7.24□□□□□ -1.25
TGFB3-205ENST00000556507 SAMD7Q7Z3H4 446 aa7.24□□□□□ -1.25
TGFB3-205ENST00000556507 WBP1LQ9NX94 342 aa7.23□□□□□ -1.25
TGFB3-205ENST00000556507 TSR3Q9UJK0 312 aaKnown RBP7.23□□□□□ -1.25
TGFB3-205ENST00000556507 HPS5Q9UPZ3 1129 aa7.23□□□□□ -1.25
TGFB3-205ENST00000556507 PPP4CP60510 307 aa7.22□□□□□ -1.25
TGFB3-205ENST00000556507 NYAP1Q6ZVC0 841 aa7.22□□□□□ -1.25
TGFB3-205ENST00000556507 EYA1Q99502 592 aa7.22□□□□□ -1.25
TGFB3-205ENST00000556507 TULP1O00294 542 aaPredicted RBP7.21□□□□□ -1.26
TGFB3-205ENST00000556507 HIC1Q14526 733 aa7.21□□□□□ -1.26
TGFB3-205ENST00000556507 RBM46Q8TBY0 533 aaKnown RBP7.2□□□□□ -1.26
TGFB3-205ENST00000556507 RNF40O75150 1001 aa7.19□□□□□ -1.26
TGFB3-205ENST00000556507 ADGRG1Q9Y653 693 aa7.19□□□□□ -1.26
TGFB3-205ENST00000556507 GNPATO15228 680 aa7.18□□□□□ -1.26
TGFB3-205ENST00000556507 SLC4A3P48751 1232 aa7.18□□□□□ -1.26
TGFB3-205ENST00000556507 FAM161AQ3B820 660 aa7.18□□□□□ -1.26
TGFB3-205ENST00000556507 SWT1Q5T5J6 900 aaKnown RBP7.18□□□□□ -1.26
TGFB3-205ENST00000556507 GPIHBP1Q8IV16 184 aa7.18□□□□□ -1.26
TGFB3-205ENST00000556507 DNAJB2P25686 324 aa7.17□□□□□ -1.26
TGFB3-205ENST00000556507 SLF2Q8IX21 1173 aa7.17□□□□□ -1.26
TGFB3-205ENST00000556507 SLC24A1O60721 1099 aa7.16□□□□□ -1.26
TGFB3-205ENST00000556507 OATP04181 439 aa7.16□□□□□ -1.26
TGFB3-205ENST00000556507 RCCD1A6NED2 376 aa7.15□□□□□ -1.26
TGFB3-205ENST00000556507 GPR37O15354 613 aa7.15□□□□□ -1.26
TGFB3-205ENST00000556507 FECHP22830 423 aa7.15□□□□□ -1.26
TGFB3-205ENST00000556507 IFFO2Q5TF58 517 aa7.15□□□□□ -1.26
TGFB3-205ENST00000556507 NECTIN2Q92692 538 aa7.15□□□□□ -1.26
TGFB3-205ENST00000556507 TMEM134Q9H6X4 195 aa7.14□□□□□ -1.27
TGFB3-205ENST00000556507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.13□□□□□ -1.27
TGFB3-205ENST00000556507 ITGBL1O95965 494 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms