RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 POLR3GLQ9BT43 218 aa10.22□□□□□ -0.77
PCNX1-211ENST00000556272 TMCO4Q5TGY1 634 aa10.21□□□□□ -0.77
PCNX1-211ENST00000556272 ITSN2Q9NZM3 1697 aa10.21□□□□□ -0.77
PCNX1-211ENST00000556272 RAPGEF6Q8TEU7 1601 aa10.21□□□□□ -0.77
PCNX1-211ENST00000556272 ADCY10Q96PN6 1610 aa10.21□□□□□ -0.78
PCNX1-211ENST00000556272 ANP32CO43423 234 aa10.21□□□□□ -0.78
PCNX1-211ENST00000556272 TRAIPQ9BWF2 469 aa10.21□□□□□ -0.78
PCNX1-211ENST00000556272 CEP170Q5SW79 1584 aa10.21□□□□□ -0.78
PCNX1-211ENST00000556272 POLR1AO95602 1720 aaPredicted RBP10.21□□□□□ -0.78
PCNX1-211ENST00000556272 DDX10Q13206 875 aaKnown RBP10.2□□□□□ -0.78
PCNX1-211ENST00000556272 DENND4BO75064 1496 aaPredicted RBP10.2□□□□□ -0.78
PCNX1-211ENST00000556272 ADGBQ8N7X0 1667 aa10.19□□□□□ -0.78
PCNX1-211ENST00000556272 OSCARQ8IYS5 282 aa10.19□□□□□ -0.78
PCNX1-211ENST00000556272 USP35Q9P2H5 1018 aa10.19□□□□□ -0.78
PCNX1-211ENST00000556272 PDE4CQ08493 712 aa10.18□□□□□ -0.78
PCNX1-211ENST00000556272 CDK13Q14004 1512 aaKnown RBP10.18□□□□□ -0.78
PCNX1-211ENST00000556272 DISP1Q96F81 1524 aa10.18□□□□□ -0.78
PCNX1-211ENST00000556272 FAM177A1Q8N128 213 aaPredicted RBP10.18□□□□□ -0.78
PCNX1-211ENST00000556272 DAPK1P53355 1430 aa10.18□□□□□ -0.78
PCNX1-211ENST00000556272 NUP160Q12769 1436 aa10.18□□□□□ -0.78
PCNX1-211ENST00000556272 GZF1Q9H116 711 aaPredicted RBP10.17□□□□□ -0.78
PCNX1-211ENST00000556272 CROCC2H7BZ55 1655 aa10.16□□□□□ -0.78
PCNX1-211ENST00000556272 KDM6BO15054 1643 aa10.16□□□□□ -0.78
PCNX1-211ENST00000556272 RNF25Q96BH1 459 aaPredicted RBP10.16□□□□□ -0.78
PCNX1-211ENST00000556272 NUP153P49790 1475 aaKnown RBP10.15□□□□□ -0.78
PCNX1-211ENST00000556272 RPRD2Q5VT52 1461 aaKnown RBP10.15□□□□□ -0.78
PCNX1-211ENST00000556272 ADGRL2O95490 1459 aa10.14□□□□□ -0.79
PCNX1-211ENST00000556272 RIMBP3CA6NJZ7 1639 aa10.13□□□□□ -0.79
PCNX1-211ENST00000556272 RIMBP3BA6NNM3 1639 aa10.13□□□□□ -0.79
PCNX1-211ENST00000556272 RIMBP3Q9UFD9 1639 aa10.13□□□□□ -0.79
PCNX1-211ENST00000556272 ABCC5O15440 1437 aa10.12□□□□□ -0.79
PCNX1-211ENST00000556272 TEX14Q8IWB6 1497 aa10.12□□□□□ -0.79
PCNX1-211ENST00000556272 KCNH8Q96L42 1107 aa10.12□□□□□ -0.79
PCNX1-211ENST00000556272 TROQ12816 1431 aaPredicted RBP10.12□□□□□ -0.79
PCNX1-211ENST00000556272 CNTLNQ9NXG0 1405 aa10.12□□□□□ -0.79
PCNX1-211ENST00000556272 ANKRD30BQ9BXX2 1392 aa10.11□□□□□ -0.79
PCNX1-211ENST00000556272 ZMYND10O75800 440 aa10.11□□□□□ -0.79
PCNX1-211ENST00000556272 NCOA1Q15788 1441 aa10.11□□□□□ -0.79
PCNX1-211ENST00000556272 E9PSI1 815 aa10.11□□□□□ -0.79
PCNX1-211ENST00000556272 NEFLP07196 543 aa10.11□□□□□ -0.79
PCNX1-211ENST00000556272 MPHOSPH9Q99550 1183 aa10.11□□□□□ -0.79
PCNX1-211ENST00000556272 EIF4G2P78344 907 aaKnown RBP eCLIP10.1□□□□□ -0.79
PCNX1-211ENST00000556272 TAF7LQ5H9L4 462 aa10.1□□□□□ -0.79
PCNX1-211ENST00000556272 SHANK2Q9UPX8 1470 aa10.1□□□□□ -0.79
PCNX1-211ENST00000556272 WDR70Q9NW82 654 aa10.1□□□□□ -0.79
PCNX1-211ENST00000556272 CLUAP1Q96AJ1 413 aa10.09□□□□□ -0.79
PCNX1-211ENST00000556272 RRP7BPQ9NSQ0 103 aa10.09□□□□□ -0.79
PCNX1-211ENST00000556272 CAMSAP2Q08AD1 1489 aa10.09□□□□□ -0.79
PCNX1-211ENST00000556272 CLASP1Q7Z460 1538 aa10.08□□□□□ -0.8
PCNX1-211ENST00000556272 SHROOM2Q13796 1616 aa10.08□□□□□ -0.8
PCNX1-211ENST00000556272 ERICH6BQ5W0A0 696 aa10.08□□□□□ -0.8
PCNX1-211ENST00000556272 CIZ1Q9ULV3 898 aaPredicted RBP10.08□□□□□ -0.8
PCNX1-211ENST00000556272 MBD5Q9P267 1494 aa10.08□□□□□ -0.8
PCNX1-211ENST00000556272 HOXD11P31277 338 aaPredicted RBP10.07□□□□□ -0.8
PCNX1-211ENST00000556272 IRF5Q13568 498 aa10.07□□□□□ -0.8
PCNX1-211ENST00000556272 KDM5DQ9BY66 1539 aa10.07□□□□□ -0.8
PCNX1-211ENST00000556272 KIF14Q15058 1648 aa10.07□□□□□ -0.8
PCNX1-211ENST00000556272 WASHC2AQ641Q2 1341 aa10.07□□□□□ -0.8
PCNX1-211ENST00000556272 CARMIL2Q6F5E8 1435 aa10.07□□□□□ -0.8
PCNX1-211ENST00000556272 HSPA5P11021 654 aaKnown RBP10.07□□□□□ -0.8
PCNX1-211ENST00000556272 TRIM52Q96A61 297 aa10.07□□□□□ -0.8
PCNX1-211ENST00000556272 JPH4Q96JJ6 628 aa10.07□□□□□ -0.8
PCNX1-211ENST00000556272 SPATA31E1Q6ZUB1 1445 aa10.07□□□□□ -0.8
PCNX1-211ENST00000556272 PZPP20742 1482 aa10.06□□□□□ -0.8
PCNX1-211ENST00000556272 GPATCH8Q9UKJ3 1502 aaKnown RBP10.06□□□□□ -0.8
PCNX1-211ENST00000556272 ABCA8O94911 1581 aa10.06□□□□□ -0.8
PCNX1-211ENST00000556272 CCDC7Q96M83 1385 aa10.06□□□□□ -0.8
PCNX1-211ENST00000556272 KDM4CQ9H3R0 1056 aa10.05□□□□□ -0.8
PCNX1-211ENST00000556272 CWC22Q9HCG8 908 aaKnown RBP10.05□□□□□ -0.8
PCNX1-211ENST00000556272 CHIC2Q9UKJ5 165 aa10.05□□□□□ -0.8
PCNX1-211ENST00000556272 ARID4BQ4LE39 1312 aaPredicted RBP10.05□□□□□ -0.8
PCNX1-211ENST00000556272 ARHGEF12Q9NZN5 1544 aa10.04□□□□□ -0.8
PCNX1-211ENST00000556272 CDC42BPAQ5VT25 1732 aa10.04□□□□□ -0.8
PCNX1-211ENST00000556272 PRG4Q92954 1404 aaPredicted RBP10.04□□□□□ -0.8
PCNX1-211ENST00000556272 KIAA1107Q9UPP5 1409 aa10.04□□□□□ -0.8
PCNX1-211ENST00000556272 ARHGEF5Q12774 1597 aa10.04□□□□□ -0.8
PCNX1-211ENST00000556272 TRAK2O60296 914 aa10.03□□□□□ -0.8
PCNX1-211ENST00000556272 L3MBTL2Q969R5 705 aa10.03□□□□□ -0.8
PCNX1-211ENST00000556272 HIRIP3Q9BW71 556 aaPredicted RBP10.03□□□□□ -0.8
PCNX1-211ENST00000556272 ZNF219Q9P2Y4 722 aaPredicted RBP10.03□□□□□ -0.8
PCNX1-211ENST00000556272 RETREG2Q8NC44 543 aa10.03□□□□□ -0.8
PCNX1-211ENST00000556272 ANKRD30AQ9BXX3 1397 aa10.02□□□□□ -0.8
PCNX1-211ENST00000556272 CADPS2Q86UW7 1296 aa10.02□□□□□ -0.81
PCNX1-211ENST00000556272 UHRF1BP1Q6BDS2 1440 aa10.02□□□□□ -0.81
PCNX1-211ENST00000556272 ABCC10Q5T3U5 1492 aa10.02□□□□□ -0.81
PCNX1-211ENST00000556272 SEMA3EO15041 775 aa10.01□□□□□ -0.81
PCNX1-211ENST00000556272 ERCC6L2Q5T890 1561 aa10.01□□□□□ -0.81
PCNX1-211ENST00000556272 BRPF3Q9ULD4 1205 aa10□□□□□ -0.81
PCNX1-211ENST00000556272 KDM5CP41229 1560 aa10□□□□□ -0.81
PCNX1-211ENST00000556272 ONECUT3O60422 494 aaPredicted RBP10□□□□□ -0.81
PCNX1-211ENST00000556272 PLB1Q6P1J6 1458 aa10□□□□□ -0.81
PCNX1-211ENST00000556272 CFDP1Q9UEE9 299 aaPredicted RBP9.99□□□□□ -0.81
PCNX1-211ENST00000556272 RALGAPBQ86X10 1494 aa9.99□□□□□ -0.81
PCNX1-211ENST00000556272 ROCK2O75116 1388 aaKnown RBP9.99□□□□□ -0.81
PCNX1-211ENST00000556272 PRKRIP1Q9H875 184 aaPredicted RBP9.99□□□□□ -0.81
PCNX1-211ENST00000556272 PTPRGP23470 1445 aa9.98□□□□□ -0.81
PCNX1-211ENST00000556272 POLA2Q14181 598 aa9.98□□□□□ -0.81
PCNX1-211ENST00000556272 RSPH4AQ5TD94 716 aa9.98□□□□□ -0.81
PCNX1-211ENST00000556272 PPM1GO15355 546 aaPredicted RBP9.98□□□□□ -0.81
PCNX1-211ENST00000556272 ANKRD50Q9ULJ7 1429 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms