RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 CCDC146Q8IYE0 955 aa19.57■□□□□ 0.72
NEK9-209ENST00000556170 STK26Q9P289 416 aa19.55■□□□□ 0.72
NEK9-209ENST00000556170 TARBP1Q13395 1621 aaKnown RBP19.55■□□□□ 0.72
NEK9-209ENST00000556170 TRAK1Q9UPV9 953 aa19.54■□□□□ 0.72
NEK9-209ENST00000556170 TCOF1Q13428 1488 aaKnown RBP19.54■□□□□ 0.72
NEK9-209ENST00000556170 ATP10BO94823 1461 aa19.53■□□□□ 0.72
NEK9-209ENST00000556170 ERICH6BQ5W0A0 696 aa19.53■□□□□ 0.72
NEK9-209ENST00000556170 PNISRQ8TF01 805 aaKnown RBP19.53■□□□□ 0.72
NEK9-209ENST00000556170 EIF5BO60841 1220 aaKnown RBP19.52■□□□□ 0.72
NEK9-209ENST00000556170 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.52■□□□□ 0.72
NEK9-209ENST00000556170 CDCA7LQ96GN5 454 aa19.52■□□□□ 0.72
NEK9-209ENST00000556170 EXOC6Q8TAG9 804 aa19.51■□□□□ 0.71
NEK9-209ENST00000556170 RAPGEF6Q8TEU7 1601 aa19.51■□□□□ 0.71
NEK9-209ENST00000556170 ESF1Q9H501 851 aaKnown RBP19.51■□□□□ 0.71
NEK9-209ENST00000556170 MLECQ14165 292 aa19.5■□□□□ 0.71
NEK9-209ENST00000556170 KIAA0556O60303 1618 aa19.5■□□□□ 0.71
NEK9-209ENST00000556170 PPM1GO15355 546 aaPredicted RBP19.5■□□□□ 0.71
NEK9-209ENST00000556170 RGS3P49796 1198 aa19.49■□□□□ 0.71
NEK9-209ENST00000556170 KDM6BO15054 1643 aa19.49■□□□□ 0.71
NEK9-209ENST00000556170 FRAT1Q92837 279 aaPredicted RBP19.49■□□□□ 0.71
NEK9-209ENST00000556170 CFAP70Q5T0N1 1121 aa19.46■□□□□ 0.71
NEK9-209ENST00000556170 WASHC2CQ9Y4E1 1318 aa19.46■□□□□ 0.71
NEK9-209ENST00000556170 MORC1Q86VD1 984 aa19.46■□□□□ 0.71
NEK9-209ENST00000556170 EIF4G3O43432 1585 aaKnown RBP19.45■□□□□ 0.7
NEK9-209ENST00000556170 PBRM1Q86U86 1689 aa19.45■□□□□ 0.7
NEK9-209ENST00000556170 ARID4BQ4LE39 1312 aaPredicted RBP19.45■□□□□ 0.7
NEK9-209ENST00000556170 NEFMP07197 916 aa19.44■□□□□ 0.7
NEK9-209ENST00000556170 POGKQ9P215 609 aa19.43■□□□□ 0.7
NEK9-209ENST00000556170 U2SURPO15042 1029 aaKnown RBP19.42■□□□□ 0.7
NEK9-209ENST00000556170 SRPK2P78362 688 aaKnown RBP19.42■□□□□ 0.7
NEK9-209ENST00000556170 ADAMTS8Q9UP79 889 aa19.42■□□□□ 0.7
NEK9-209ENST00000556170 RRP1P56182 461 aaKnown RBP19.41■□□□□ 0.7
NEK9-209ENST00000556170 TMEM132EQ6IEE7 984 aa19.41■□□□□ 0.7
NEK9-209ENST00000556170 CCDC141Q6ZP82 1450 aa19.4■□□□□ 0.7
NEK9-209ENST00000556170 RRP7AQ9Y3A4 280 aaKnown RBP19.4■□□□□ 0.7
NEK9-209ENST00000556170 PLEKHH2Q8IVE3 1493 aa19.39■□□□□ 0.7
NEK9-209ENST00000556170 NOP58Q9Y2X3 529 aaKnown RBP19.39■□□□□ 0.7
NEK9-209ENST00000556170 SCAPERQ9BY12 1400 aa19.39■□□□□ 0.69
NEK9-209ENST00000556170 LAS1LQ9Y4W2 734 aaKnown RBP19.39■□□□□ 0.69
NEK9-209ENST00000556170 PZPP20742 1482 aa19.39■□□□□ 0.69
NEK9-209ENST00000556170 APAF1O14727 1248 aa19.38■□□□□ 0.69
NEK9-209ENST00000556170 CFAP53Q96M91 514 aa19.38■□□□□ 0.69
NEK9-209ENST00000556170 KIF14Q15058 1648 aa19.38■□□□□ 0.69
NEK9-209ENST00000556170 SLC24A1O60721 1099 aa19.37■□□□□ 0.69
NEK9-209ENST00000556170 GOLGA2Q08379 1002 aa19.37■□□□□ 0.69
NEK9-209ENST00000556170 CYB5RLQ6IPT4 315 aa19.36■□□□□ 0.69
NEK9-209ENST00000556170 BRD4O60885 1362 aaPredicted RBP19.35■□□□□ 0.69
NEK9-209ENST00000556170 PDE3BQ13370 1112 aa19.35■□□□□ 0.69
NEK9-209ENST00000556170 OSCARQ8IYS5 282 aa19.35■□□□□ 0.69
NEK9-209ENST00000556170 CRBNQ96SW2 442 aa19.34■□□□□ 0.69
NEK9-209ENST00000556170 U2AF1L5P0DN76 240 aaPredicted RBP19.33■□□□□ 0.68
NEK9-209ENST00000556170 U2AF1Q01081 240 aaKnown RBP eCLIP19.33■□□□□ 0.68
NEK9-209ENST00000556170 CEP170Q5SW79 1584 aa19.31■□□□□ 0.68
NEK9-209ENST00000556170 NUP160Q12769 1436 aa19.31■□□□□ 0.68
NEK9-209ENST00000556170 TEX14Q8IWB6 1497 aa19.31■□□□□ 0.68
NEK9-209ENST00000556170 EIF3AQ14152 1382 aaKnown RBP19.31■□□□□ 0.68
NEK9-209ENST00000556170 DNMT1P26358 1616 aaKnown RBP19.31■□□□□ 0.68
NEK9-209ENST00000556170 PPP2R1AP30153 589 aa19.29■□□□□ 0.68
NEK9-209ENST00000556170 RAPGEF3O95398 923 aa19.29■□□□□ 0.68
NEK9-209ENST00000556170 DENND4BO75064 1496 aaPredicted RBP19.29■□□□□ 0.68
NEK9-209ENST00000556170 BCL2L13Q9BXK5 485 aa19.29■□□□□ 0.68
NEK9-209ENST00000556170 CLUAP1Q96AJ1 413 aa19.28■□□□□ 0.68
NEK9-209ENST00000556170 RTN4Q9NQC3 1192 aaKnown RBP19.28■□□□□ 0.68
NEK9-209ENST00000556170 PLEKHG5O94827 1062 aa19.28■□□□□ 0.68
NEK9-209ENST00000556170 DISP3Q9P2K9 1392 aa19.26■□□□□ 0.67
NEK9-209ENST00000556170 ERBINQ96RT1 1412 aa19.26■□□□□ 0.67
NEK9-209ENST00000556170 SKAP1Q86WV1 359 aa19.25■□□□□ 0.67
NEK9-209ENST00000556170 SLC12A5Q9H2X9 1139 aa19.25■□□□□ 0.67
NEK9-209ENST00000556170 SYCP2Q9BX26 1530 aa19.24■□□□□ 0.67
NEK9-209ENST00000556170 MAPK8IP3Q9UPT6 1336 aa19.24■□□□□ 0.67
NEK9-209ENST00000556170 DHX29Q7Z478 1369 aaKnown RBP19.24■□□□□ 0.67
NEK9-209ENST00000556170 SOX12O15370 315 aa19.24■□□□□ 0.67
NEK9-209ENST00000556170 SMG6Q86US8 1419 aaKnown RBP19.24■□□□□ 0.67
NEK9-209ENST00000556170 TCERG1O14776 1098 aaKnown RBP19.23■□□□□ 0.67
NEK9-209ENST00000556170 FTSJ3Q8IY81 847 aaKnown RBP19.23■□□□□ 0.67
NEK9-209ENST00000556170 CENPJQ9HC77 1338 aaPredicted RBP19.23■□□□□ 0.67
NEK9-209ENST00000556170 MINK1Q8N4C8 1332 aaPredicted RBP19.22■□□□□ 0.67
NEK9-209ENST00000556170 MSH5O43196 834 aa19.22■□□□□ 0.67
NEK9-209ENST00000556170 LRRIQ1Q96JM4 1722 aa19.22■□□□□ 0.67
NEK9-209ENST00000556170 FANCIQ9NVI1 1328 aa19.21■□□□□ 0.67
NEK9-209ENST00000556170 PDE4AP27815 886 aa19.21■□□□□ 0.67
NEK9-209ENST00000556170 SPATA31E1Q6ZUB1 1445 aa19.21■□□□□ 0.67
NEK9-209ENST00000556170 ADGRF5Q8IZF2 1346 aa19.2■□□□□ 0.66
NEK9-209ENST00000556170 DEKP35659 375 aaKnown RBP19.2■□□□□ 0.66
NEK9-209ENST00000556170 CABP2Q9NPB3 220 aa19.2■□□□□ 0.66
NEK9-209ENST00000556170 TRAPPC8Q9Y2L5 1435 aa19.2■□□□□ 0.66
NEK9-209ENST00000556170 TESK2Q96S53 571 aa19.19■□□□□ 0.66
NEK9-209ENST00000556170 IPO9Q96P70 1041 aaKnown RBP19.19■□□□□ 0.66
NEK9-209ENST00000556170 ITSN2Q9NZM3 1697 aa19.19■□□□□ 0.66
NEK9-209ENST00000556170 GCC2Q8IWJ2 1684 aa19.19■□□□□ 0.66
NEK9-209ENST00000556170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.19■□□□□ 0.66
NEK9-209ENST00000556170 UPF2Q9HAU5 1272 aaKnown RBP19.18■□□□□ 0.66
NEK9-209ENST00000556170 NUTM2FA1L443 756 aa19.17■□□□□ 0.66
NEK9-209ENST00000556170 FAM135AQ9P2D6 1515 aa19.17■□□□□ 0.66
NEK9-209ENST00000556170 VGFO15240 615 aaPredicted RBP19.17■□□□□ 0.66
NEK9-209ENST00000556170 SLC4A3P48751 1232 aa19.17■□□□□ 0.66
NEK9-209ENST00000556170 RALGAPBQ86X10 1494 aa19.17■□□□□ 0.66
NEK9-209ENST00000556170 COG6Q9Y2V7 657 aa19.17■□□□□ 0.66
NEK9-209ENST00000556170 PRAG1Q86YV5 1406 aa19.15■□□□□ 0.66
NEK9-209ENST00000556170 C20orf194Q5TEA3 1177 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms