RNA–Protein interactions for RNA: ENST00000556143.5

ZFYVE1-208, Transcript of zinc finger FYVE-type containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZFYVE1, Length 4,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1-208ENST00000556143 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.27□□□□□ -0.29
ZFYVE1-208ENST00000556143 ANKRD50Q9ULJ7 1429 aa13.26□□□□□ -0.29
ZFYVE1-208ENST00000556143 NUTM2FA1L443 756 aa13.26□□□□□ -0.29
ZFYVE1-208ENST00000556143 HSP90AB1P08238 724 aaKnown RBP13.25□□□□□ -0.29
ZFYVE1-208ENST00000556143 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
ZFYVE1-208ENST00000556143 B4GALNT3Q6L9W6 998 aa13.25□□□□□ -0.29
ZFYVE1-208ENST00000556143 NGEFQ8N5V2 710 aa13.25□□□□□ -0.29
ZFYVE1-208ENST00000556143 MYBBP1AQ9BQG0 1328 aaKnown RBP13.25□□□□□ -0.29
ZFYVE1-208ENST00000556143 ZNF330Q9Y3S2 320 aaPredicted RBP13.25□□□□□ -0.29
ZFYVE1-208ENST00000556143 KIAA1211Q6ZU35 1233 aa13.25□□□□□ -0.29
ZFYVE1-208ENST00000556143 PANK3Q9H999 370 aa13.25□□□□□ -0.29
ZFYVE1-208ENST00000556143 TRIM44Q96DX7 344 aaPredicted RBP13.24□□□□□ -0.29
ZFYVE1-208ENST00000556143 LRRC9Q6ZRR7 1453 aa13.24□□□□□ -0.29
ZFYVE1-208ENST00000556143 SMC4Q9NTJ3 1288 aa13.24□□□□□ -0.29
ZFYVE1-208ENST00000556143 NESP48681 1621 aa13.24□□□□□ -0.29
ZFYVE1-208ENST00000556143 USP47Q96K76 1375 aa13.24□□□□□ -0.29
ZFYVE1-208ENST00000556143 ITPRIPQ8IWB1 547 aa13.23□□□□□ -0.29
ZFYVE1-208ENST00000556143 PMFBP1Q8TBY8 1022 aa13.23□□□□□ -0.29
ZFYVE1-208ENST00000556143 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
ZFYVE1-208ENST00000556143 EFCAB5A4FU69 1503 aa13.22□□□□□ -0.29
ZFYVE1-208ENST00000556143 HSCBQ8IWL3 235 aa13.22□□□□□ -0.29
ZFYVE1-208ENST00000556143 MINK1Q8N4C8 1332 aaPredicted RBP13.22□□□□□ -0.29
ZFYVE1-208ENST00000556143 ZNF644Q9H582 1327 aaPredicted RBP13.22□□□□□ -0.29
ZFYVE1-208ENST00000556143 LTV1Q96GA3 475 aaPredicted RBP13.22□□□□□ -0.29
ZFYVE1-208ENST00000556143 NAP1L2Q9ULW6 460 aaPredicted RBP13.21□□□□□ -0.29
ZFYVE1-208ENST00000556143 NCOA2Q15596 1464 aa13.21□□□□□ -0.29
ZFYVE1-208ENST00000556143 KIF21BO75037 1637 aa13.21□□□□□ -0.29
ZFYVE1-208ENST00000556143 CENPJQ9HC77 1338 aaPredicted RBP13.21□□□□□ -0.29
ZFYVE1-208ENST00000556143 POLA1P09884 1462 aaPredicted RBP13.21□□□□□ -0.3
ZFYVE1-208ENST00000556143 GPATCH3Q96I76 525 aa13.2□□□□□ -0.3
ZFYVE1-208ENST00000556143 PRDM2Q13029 1718 aa13.2□□□□□ -0.3
ZFYVE1-208ENST00000556143 TAF7LQ5H9L4 462 aa13.2□□□□□ -0.3
ZFYVE1-208ENST00000556143 ARHGAP5Q13017 1502 aa13.19□□□□□ -0.3
ZFYVE1-208ENST00000556143 GOLGA6L4A6NEF3 574 aa13.19□□□□□ -0.3
ZFYVE1-208ENST00000556143 C1orf141Q5JVX7 400 aa13.19□□□□□ -0.3
ZFYVE1-208ENST00000556143 GORABQ5T7V8 394 aa13.19□□□□□ -0.3
ZFYVE1-208ENST00000556143 AFAP1Q8N556 730 aa13.19□□□□□ -0.3
ZFYVE1-208ENST00000556143 EVA1CP58658 441 aa13.18□□□□□ -0.3
ZFYVE1-208ENST00000556143 TEFQ10587 303 aa13.18□□□□□ -0.3
ZFYVE1-208ENST00000556143 PTMAP06454 111 aaKnown RBP13.17□□□□□ -0.3
ZFYVE1-208ENST00000556143 PSME1Q06323 249 aa13.17□□□□□ -0.3
ZFYVE1-208ENST00000556143 PRXQ9BXM0 1461 aa13.17□□□□□ -0.3
ZFYVE1-208ENST00000556143 TSHZ2Q9NRE2 1034 aa13.17□□□□□ -0.3
ZFYVE1-208ENST00000556143 DNMBPQ6XZF7 1577 aa13.17□□□□□ -0.3
ZFYVE1-208ENST00000556143 TROQ12816 1431 aaPredicted RBP13.16□□□□□ -0.3
ZFYVE1-208ENST00000556143 MIA2Q96PC5 1412 aa13.16□□□□□ -0.3
ZFYVE1-208ENST00000556143 APBB1O00213 710 aa13.16□□□□□ -0.3
ZFYVE1-208ENST00000556143 GTF2E1P29083 439 aaPredicted RBP13.16□□□□□ -0.3
ZFYVE1-208ENST00000556143 TOP2BQ02880 1626 aa13.16□□□□□ -0.3
ZFYVE1-208ENST00000556143 CCDC146Q8IYE0 955 aa13.16□□□□□ -0.3
ZFYVE1-208ENST00000556143 PRKRIP1Q9H875 184 aaPredicted RBP13.16□□□□□ -0.3
ZFYVE1-208ENST00000556143 A0A0U1RQG5 324 aaPredicted RBP13.15□□□□□ -0.3
ZFYVE1-208ENST00000556143 NRDCO43847 1150 aa13.15□□□□□ -0.3
ZFYVE1-208ENST00000556143 ATF3P18847 181 aa13.15□□□□□ -0.3
ZFYVE1-208ENST00000556143 HFM1A2PYH4 1435 aa13.15□□□□□ -0.3
ZFYVE1-208ENST00000556143 TCERG1O14776 1098 aaKnown RBP13.15□□□□□ -0.3
ZFYVE1-208ENST00000556143 SNAPC4Q5SXM2 1469 aa13.15□□□□□ -0.3
ZFYVE1-208ENST00000556143 SYNJ1O43426 1573 aa13.14□□□□□ -0.31
ZFYVE1-208ENST00000556143 RRBP1Q9P2E9 1410 aaKnown RBP13.14□□□□□ -0.31
ZFYVE1-208ENST00000556143 SLC4A10Q6U841 1118 aa13.14□□□□□ -0.31
ZFYVE1-208ENST00000556143 DIAPH1O60610 1272 aaKnown RBP13.14□□□□□ -0.31
ZFYVE1-208ENST00000556143 CHMP3Q9Y3E7 222 aa13.14□□□□□ -0.31
ZFYVE1-208ENST00000556143 E9PSI1 815 aa13.14□□□□□ -0.31
ZFYVE1-208ENST00000556143 KIAA0586Q9BVV6 1533 aa13.14□□□□□ -0.31
ZFYVE1-208ENST00000556143 NOP58Q9Y2X3 529 aaKnown RBP13.13□□□□□ -0.31
ZFYVE1-208ENST00000556143 GOLGA6L6A8MZA4 724 aa13.13□□□□□ -0.31
ZFYVE1-208ENST00000556143 SLC52A1Q9NWF4 448 aa13.13□□□□□ -0.31
ZFYVE1-208ENST00000556143 LAMC3Q9Y6N6 1575 aa13.13□□□□□ -0.31
ZFYVE1-208ENST00000556143 VSIG10Q8N0Z9 540 aa13.12□□□□□ -0.31
ZFYVE1-208ENST00000556143 THEMISQ8N1K5 641 aaPredicted RBP13.12□□□□□ -0.31
ZFYVE1-208ENST00000556143 ARAP1Q96P48 1450 aa13.11□□□□□ -0.31
ZFYVE1-208ENST00000556143 TTC5Q8N0Z6 440 aa13.11□□□□□ -0.31
ZFYVE1-208ENST00000556143 ISY1Q9ULR0 285 aaKnown RBP13.11□□□□□ -0.31
ZFYVE1-208ENST00000556143 RBM19Q9Y4C8 960 aaKnown RBP13.11□□□□□ -0.31
ZFYVE1-208ENST00000556143 EHBP1L1Q8N3D4 1523 aa13.11□□□□□ -0.31
ZFYVE1-208ENST00000556143 CLUAP1Q96AJ1 413 aa13.1□□□□□ -0.31
ZFYVE1-208ENST00000556143 NEXNQ0ZGT2 675 aa13.1□□□□□ -0.31
ZFYVE1-208ENST00000556143 TAOK2Q9UL54 1235 aa13.1□□□□□ -0.31
ZFYVE1-208ENST00000556143 TXNDC2Q86VQ3 553 aa13.09□□□□□ -0.31
ZFYVE1-208ENST00000556143 G3V3G9 751 aa13.09□□□□□ -0.31
ZFYVE1-208ENST00000556143 HTATSF1O43719 755 aaKnown RBP13.09□□□□□ -0.31
ZFYVE1-208ENST00000556143 DCAF8Q5TAQ9 597 aa13.09□□□□□ -0.31
ZFYVE1-208ENST00000556143 POGZQ7Z3K3 1410 aa13.09□□□□□ -0.31
ZFYVE1-208ENST00000556143 GNL2Q13823 731 aaKnown RBP13.09□□□□□ -0.31
ZFYVE1-208ENST00000556143 ABCA10Q8WWZ4 1543 aa13.08□□□□□ -0.31
ZFYVE1-208ENST00000556143 C9orf84Q5VXU9 1444 aa13.08□□□□□ -0.32
ZFYVE1-208ENST00000556143 ZKSCAN2Q63HK3 967 aa13.08□□□□□ -0.32
ZFYVE1-208ENST00000556143 SCAPERQ9BY12 1400 aa13.08□□□□□ -0.32
ZFYVE1-208ENST00000556143 RAPGEF4Q8WZA2 1011 aa13.07□□□□□ -0.32
ZFYVE1-208ENST00000556143 RRP7AQ9Y3A4 280 aaKnown RBP13.07□□□□□ -0.32
ZFYVE1-208ENST00000556143 PTMSP20962 102 aa13.07□□□□□ -0.32
ZFYVE1-208ENST00000556143 TPRNQ4KMQ1 711 aa13.07□□□□□ -0.32
ZFYVE1-208ENST00000556143 UBE2Q2Q8WVN8 375 aa13.07□□□□□ -0.32
ZFYVE1-208ENST00000556143 GPRASP1Q5JY77 1395 aa13.06□□□□□ -0.32
ZFYVE1-208ENST00000556143 TRIM6-TRIM34B2RNG4 842 aa13.06□□□□□ -0.32
ZFYVE1-208ENST00000556143 HECW1Q76N89 1606 aa13.06□□□□□ -0.32
ZFYVE1-208ENST00000556143 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
ZFYVE1-208ENST00000556143 API5Q9BZZ5 524 aaKnown RBP13.05□□□□□ -0.32
ZFYVE1-208ENST00000556143 APAF1O14727 1248 aa13.05□□□□□ -0.32
ZFYVE1-208ENST00000556143 FRAT2O75474 233 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms