RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 PDE4AP27815 886 aa8.63□□□□□ -1.03
EFCAB11-210ENST00000556078 LAPTM4BQ86VI4 370 aa8.63□□□□□ -1.03
EFCAB11-210ENST00000556078 PRKD2Q9BZL6 878 aa8.63□□□□□ -1.03
EFCAB11-210ENST00000556078 NCKAP5LQ9HCH0 1330 aa8.62□□□□□ -1.03
EFCAB11-210ENST00000556078 NKX1-1Q15270 411 aaPredicted RBP8.61□□□□□ -1.03
EFCAB11-210ENST00000556078 PROX2Q3B8N5 592 aa8.61□□□□□ -1.03
EFCAB11-210ENST00000556078 CHGAP10645 457 aaKnown RBP8.6□□□□□ -1.03
EFCAB11-210ENST00000556078 ONECUT3O60422 494 aaPredicted RBP8.58□□□□□ -1.04
EFCAB11-210ENST00000556078 FBXW7Q969H0 707 aa8.58□□□□□ -1.04
EFCAB11-210ENST00000556078 ZFRQ96KR1 1074 aaKnown RBP8.58□□□□□ -1.04
EFCAB11-210ENST00000556078 PCDHGA10Q9Y5H3 936 aa8.58□□□□□ -1.04
EFCAB11-210ENST00000556078 COL9A1P20849 921 aa8.57□□□□□ -1.04
EFCAB11-210ENST00000556078 MAP3K9P80192 1104 aa8.57□□□□□ -1.04
EFCAB11-210ENST00000556078 TYW1BQ6NUM6 668 aa8.55□□□□□ -1.04
EFCAB11-210ENST00000556078 DDX27Q96GQ7 796 aaKnown RBP8.55□□□□□ -1.04
EFCAB11-210ENST00000556078 MFSD10Q14728 455 aa8.54□□□□□ -1.04
EFCAB11-210ENST00000556078 LARP6Q9BRS8 491 aaKnown RBP8.54□□□□□ -1.04
EFCAB11-210ENST00000556078 KIAA1468Q9P260 1216 aa8.54□□□□□ -1.04
EFCAB11-210ENST00000556078 PDZRN3Q9UPQ7 1066 aa8.54□□□□□ -1.04
EFCAB11-210ENST00000556078 PHF14O94880 888 aa8.53□□□□□ -1.04
EFCAB11-210ENST00000556078 SEPT9Q9UHD8 586 aaPredicted RBP8.53□□□□□ -1.04
EFCAB11-210ENST00000556078 HPS5Q9UPZ3 1129 aa8.53□□□□□ -1.04
EFCAB11-210ENST00000556078 EMILIN3Q9NT22 766 aa8.51□□□□□ -1.05
EFCAB11-210ENST00000556078 TSR3Q9UJK0 312 aaKnown RBP8.51□□□□□ -1.05
EFCAB11-210ENST00000556078 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.5□□□□□ -1.05
EFCAB11-210ENST00000556078 V9GY48 417 aaPredicted RBP8.5□□□□□ -1.05
EFCAB11-210ENST00000556078 FAM98CQ17RN3 349 aaKnown RBP8.49□□□□□ -1.05
EFCAB11-210ENST00000556078 LRCH3Q96II8 777 aa8.48□□□□□ -1.05
EFCAB11-210ENST00000556078 TRIM6-TRIM34B2RNG4 842 aa8.47□□□□□ -1.05
EFCAB11-210ENST00000556078 C6orf132Q5T0Z8 1188 aa8.47□□□□□ -1.05
EFCAB11-210ENST00000556078 PPP1R18Q6NYC8 613 aa8.47□□□□□ -1.05
EFCAB11-210ENST00000556078 EPAS1Q99814 870 aa8.47□□□□□ -1.05
EFCAB11-210ENST00000556078 GTPBP6O43824 516 aaPredicted RBP8.45□□□□□ -1.06
EFCAB11-210ENST00000556078 TJAP1Q5JTD0 557 aa8.44□□□□□ -1.06
EFCAB11-210ENST00000556078 PPP4CP60510 307 aa8.43□□□□□ -1.06
EFCAB11-210ENST00000556078 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.42□□□□□ -1.06
EFCAB11-210ENST00000556078 POTECB2RU33 542 aa8.41□□□□□ -1.06
EFCAB11-210ENST00000556078 CAMK2BQ13554 666 aa8.39□□□□□ -1.07
EFCAB11-210ENST00000556078 MTRQ99707 1265 aa8.39□□□□□ -1.07
EFCAB11-210ENST00000556078 IL21Q9HBE4 155 aa8.38□□□□□ -1.07
EFCAB11-210ENST00000556078 PKDCCQ504Y2 493 aa8.37□□□□□ -1.07
EFCAB11-210ENST00000556078 TREML4Q6UXN2 200 aa8.37□□□□□ -1.07
EFCAB11-210ENST00000556078 PACS2Q86VP3 889 aa8.37□□□□□ -1.07
EFCAB11-210ENST00000556078 ZNF516Q92618 1163 aa8.36□□□□□ -1.07
EFCAB11-210ENST00000556078 MYT1Q01538 1121 aa8.35□□□□□ -1.07
EFCAB11-210ENST00000556078 TSKSQ9UJT2 592 aa8.35□□□□□ -1.07
EFCAB11-210ENST00000556078 RBM33Q96EV2 1170 aaKnown RBP8.34□□□□□ -1.07
EFCAB11-210ENST00000556078 DPYSL4O14531 572 aa8.33□□□□□ -1.08
EFCAB11-210ENST00000556078 CADPS2Q86UW7 1296 aa8.33□□□□□ -1.08
EFCAB11-210ENST00000556078 EN1Q05925 392 aaPredicted RBP8.32□□□□□ -1.08
EFCAB11-210ENST00000556078 NKX2-3Q8TAU0 364 aa8.32□□□□□ -1.08
EFCAB11-210ENST00000556078 GGCXP38435 758 aa8.31□□□□□ -1.08
EFCAB11-210ENST00000556078 SAMD7Q7Z3H4 446 aa8.31□□□□□ -1.08
EFCAB11-210ENST00000556078 DGAT1O75907 488 aa8.3□□□□□ -1.08
EFCAB11-210ENST00000556078 LCE2AQ5TA79 106 aaPredicted RBP8.3□□□□□ -1.08
EFCAB11-210ENST00000556078 DDX12PQ92771 950 aa8.3□□□□□ -1.08
EFCAB11-210ENST00000556078 TSR1Q2NL82 804 aaKnown RBP8.29□□□□□ -1.08
EFCAB11-210ENST00000556078 TRIM67Q6ZTA4 783 aa8.29□□□□□ -1.08
EFCAB11-210ENST00000556078 MAP3K7O43318 606 aa8.28□□□□□ -1.08
EFCAB11-210ENST00000556078 CDCA7LQ96GN5 454 aa8.28□□□□□ -1.08
EFCAB11-210ENST00000556078 PRSS12P56730 875 aa8.27□□□□□ -1.09
EFCAB11-210ENST00000556078 NBR1Q14596 966 aa8.27□□□□□ -1.09
EFCAB11-210ENST00000556078 CERKQ8TCT0 537 aa8.27□□□□□ -1.09
EFCAB11-210ENST00000556078 STK17AQ9UEE5 414 aa8.27□□□□□ -1.09
EFCAB11-210ENST00000556078 SMAPO00193 183 aa8.26□□□□□ -1.09
EFCAB11-210ENST00000556078 PDIA6Q15084 440 aa8.25□□□□□ -1.09
EFCAB11-210ENST00000556078 FAM198AQ9UFP1 575 aa8.25□□□□□ -1.09
EFCAB11-210ENST00000556078 FAM187AA6NFU0 413 aa8.24□□□□□ -1.09
EFCAB11-210ENST00000556078 RNF40O75150 1001 aa8.24□□□□□ -1.09
EFCAB11-210ENST00000556078 SLC19A1P41440 591 aa8.24□□□□□ -1.09
EFCAB11-210ENST00000556078 TATDN2Q93075 761 aa8.24□□□□□ -1.09
EFCAB11-210ENST00000556078 LOC100996750A0A140TA64 210 aa8.23□□□□□ -1.09
EFCAB11-210ENST00000556078 NBPF26B4DH59 902 aa8.23□□□□□ -1.09
EFCAB11-210ENST00000556078 WFS1O76024 890 aa8.23□□□□□ -1.09
EFCAB11-210ENST00000556078 COPS2P61201 443 aa8.23□□□□□ -1.09
EFCAB11-210ENST00000556078 TMUB1Q9BVT8 246 aa8.23□□□□□ -1.09
EFCAB11-210ENST00000556078 KRTAP4-6Q9BYQ5 205 aa8.23□□□□□ -1.09
EFCAB11-210ENST00000556078 SPDYE16A6NNV3 312 aaPredicted RBP8.22□□□□□ -1.09
EFCAB11-210ENST00000556078 C3orf80F5H4A9 247 aa8.22□□□□□ -1.09
EFCAB11-210ENST00000556078 ST8SIA5O15466 376 aa8.22□□□□□ -1.09
EFCAB11-210ENST00000556078 APLP1P51693 650 aa8.22□□□□□ -1.09
EFCAB11-210ENST00000556078 NECTIN2Q92692 538 aa8.22□□□□□ -1.09
EFCAB11-210ENST00000556078 HDGFP51858 240 aaKnown RBP8.21□□□□□ -1.1
EFCAB11-210ENST00000556078 PNMA3Q9UL41 463 aa8.21□□□□□ -1.1
EFCAB11-210ENST00000556078 INSM1Q01101 510 aaPredicted RBP8.19□□□□□ -1.1
EFCAB11-210ENST00000556078 RBM27Q9P2N5 1060 aaKnown RBP8.19□□□□□ -1.1
EFCAB11-210ENST00000556078 TNFRSF10AO00220 468 aa8.18□□□□□ -1.1
EFCAB11-210ENST00000556078 PRR20EP86478 221 aa8.18□□□□□ -1.1
EFCAB11-210ENST00000556078 PRR20CP86479 221 aa8.18□□□□□ -1.1
EFCAB11-210ENST00000556078 PRR20DP86480 221 aa8.18□□□□□ -1.1
EFCAB11-210ENST00000556078 PRR20BP86481 221 aa8.18□□□□□ -1.1
EFCAB11-210ENST00000556078 PRR20AP86496 221 aa8.18□□□□□ -1.1
EFCAB11-210ENST00000556078 SPRYD7Q5W111 196 aa8.18□□□□□ -1.1
EFCAB11-210ENST00000556078 AAASQ9NRG9 546 aa8.18□□□□□ -1.1
EFCAB11-210ENST00000556078 ZNF598Q86UK7 904 aaKnown RBP8.17□□□□□ -1.1
EFCAB11-210ENST00000556078 RNF223E7ERA6 249 aa8.16□□□□□ -1.1
EFCAB11-210ENST00000556078 PRIM1P49642 420 aaKnown RBP8.16□□□□□ -1.1
EFCAB11-210ENST00000556078 NUDT18Q6ZVK8 323 aa8.16□□□□□ -1.1
EFCAB11-210ENST00000556078 EMID1Q96A84 441 aaPredicted RBP8.16□□□□□ -1.1
EFCAB11-210ENST00000556078 ZPR1O75312 459 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms