RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 DPYSL4O14531 572 aa11.38□□□□□ -0.59
ATXN3-233ENST00000555816 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
ATXN3-233ENST00000555816 PLA2G2EQ9NZK7 142 aa11.38□□□□□ -0.59
ATXN3-233ENST00000555816 GOLGA8CPA6NN73 597 aa11.37□□□□□ -0.59
ATXN3-233ENST00000555816 RABGEF1Q9UJ41 708 aa11.37□□□□□ -0.59
ATXN3-233ENST00000555816 ARIH1Q9Y4X5 557 aaPredicted RBP11.36□□□□□ -0.59
ATXN3-233ENST00000555816 PAXIP1Q6ZW49 1069 aaPredicted RBP11.35□□□□□ -0.59
ATXN3-233ENST00000555816 WDR70Q9NW82 654 aa11.35□□□□□ -0.59
ATXN3-233ENST00000555816 PDIA6Q15084 440 aa11.33□□□□□ -0.6
ATXN3-233ENST00000555816 E2F4Q16254 413 aa11.33□□□□□ -0.6
ATXN3-233ENST00000555816 CFAP44Q96MT7 982 aa11.33□□□□□ -0.6
ATXN3-233ENST00000555816 C6orf132Q5T0Z8 1188 aa11.32□□□□□ -0.6
ATXN3-233ENST00000555816 LAPTM4BQ86VI4 370 aa11.32□□□□□ -0.6
ATXN3-233ENST00000555816 THSD4Q6ZMP0 1018 aa11.31□□□□□ -0.6
ATXN3-233ENST00000555816 WNT2BQ93097 391 aa11.31□□□□□ -0.6
ATXN3-233ENST00000555816 COL9A1P20849 921 aa11.3□□□□□ -0.6
ATXN3-233ENST00000555816 ABCC9O60706 1549 aa11.29□□□□□ -0.6
ATXN3-233ENST00000555816 IFFO2Q5TF58 517 aa11.28□□□□□ -0.6
ATXN3-233ENST00000555816 PTPN5P54829 565 aa11.27□□□□□ -0.61
ATXN3-233ENST00000555816 DDX12PQ92771 950 aa11.26□□□□□ -0.61
ATXN3-233ENST00000555816 EN1Q05925 392 aaPredicted RBP11.25□□□□□ -0.61
ATXN3-233ENST00000555816 PROX2Q3B8N5 592 aa11.25□□□□□ -0.61
ATXN3-233ENST00000555816 ANKK1Q8NFD2 765 aa11.24□□□□□ -0.61
ATXN3-233ENST00000555816 KIAA1468Q9P260 1216 aa11.24□□□□□ -0.61
ATXN3-233ENST00000555816 TRIM6-TRIM34B2RNG4 842 aa11.23□□□□□ -0.61
ATXN3-233ENST00000555816 NYAP1Q6ZVC0 841 aa11.23□□□□□ -0.61
ATXN3-233ENST00000555816 CERKQ8TCT0 537 aa11.23□□□□□ -0.61
ATXN3-233ENST00000555816 NBR1Q14596 966 aa11.21□□□□□ -0.61
ATXN3-233ENST00000555816 RBM33Q96EV2 1170 aaKnown RBP11.21□□□□□ -0.61
ATXN3-233ENST00000555816 PACS2Q86VP3 889 aa11.2□□□□□ -0.62
ATXN3-233ENST00000555816 MAP3K7O43318 606 aa11.19□□□□□ -0.62
ATXN3-233ENST00000555816 ZFRQ96KR1 1074 aaKnown RBP11.19□□□□□ -0.62
ATXN3-233ENST00000555816 SOWAHBA6NEL2 793 aa11.18□□□□□ -0.62
ATXN3-233ENST00000555816 RGS20O76081 388 aa11.18□□□□□ -0.62
ATXN3-233ENST00000555816 FAM98CQ17RN3 349 aaKnown RBP11.18□□□□□ -0.62
ATXN3-233ENST00000555816 GRXCR2A6NFK2 248 aa11.12□□□□□ -0.63
ATXN3-233ENST00000555816 PRSS12P56730 875 aa11.12□□□□□ -0.63
ATXN3-233ENST00000555816 TSR1Q2NL82 804 aaKnown RBP11.12□□□□□ -0.63
ATXN3-233ENST00000555816 RBM27Q9P2N5 1060 aaKnown RBP11.12□□□□□ -0.63
ATXN3-233ENST00000555816 OSBPP22059 807 aa11.11□□□□□ -0.63
ATXN3-233ENST00000555816 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
ATXN3-233ENST00000555816 CDCA7LQ96GN5 454 aa11.11□□□□□ -0.63
ATXN3-233ENST00000555816 TSKSQ9UJT2 592 aa11.11□□□□□ -0.63
ATXN3-233ENST00000555816 ITGBL1O95965 494 aaPredicted RBP11.1□□□□□ -0.63
ATXN3-233ENST00000555816 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.1□□□□□ -0.63
ATXN3-233ENST00000555816 SEPT9Q9UHD8 586 aaPredicted RBP11.1□□□□□ -0.63
ATXN3-233ENST00000555816 BCAMP50895 628 aa11.09□□□□□ -0.63
ATXN3-233ENST00000555816 LRCH3Q96II8 777 aa11.09□□□□□ -0.63
ATXN3-233ENST00000555816 TSR3Q9UJK0 312 aaKnown RBP11.09□□□□□ -0.63
ATXN3-233ENST00000555816 A0A0G2JS52 829 aa11.06□□□□□ -0.64
ATXN3-233ENST00000555816 TSHZ2Q9NRE2 1034 aa11.06□□□□□ -0.64
ATXN3-233ENST00000555816 NBPF26B4DH59 902 aa11.05□□□□□ -0.64
ATXN3-233ENST00000555816 WBP1LQ9NX94 342 aa11.05□□□□□ -0.64
ATXN3-233ENST00000555816 HDGFP51858 240 aaKnown RBP11.04□□□□□ -0.64
ATXN3-233ENST00000555816 PRIM1P49642 420 aaKnown RBP11.03□□□□□ -0.64
ATXN3-233ENST00000555816 TATDN2Q93075 761 aa11.03□□□□□ -0.64
ATXN3-233ENST00000555816 HPS5Q9UPZ3 1129 aa11.02□□□□□ -0.65
ATXN3-233ENST00000555816 PPP4CP60510 307 aa11.01□□□□□ -0.65
ATXN3-233ENST00000555816 KCNC4Q03721 635 aa11.01□□□□□ -0.65
ATXN3-233ENST00000555816 P3H3Q8IVL6 736 aa11.01□□□□□ -0.65
ATXN3-233ENST00000555816 NECTIN2Q92692 538 aa11□□□□□ -0.65
ATXN3-233ENST00000555816 TTC13Q8NBP0 860 aa10.99□□□□□ -0.65
ATXN3-233ENST00000555816 FAM198AQ9UFP1 575 aa10.99□□□□□ -0.65
ATXN3-233ENST00000555816 PNMA3Q9UL41 463 aa10.99□□□□□ -0.65
ATXN3-233ENST00000555816 NPDC1Q9NQX5 325 aaPredicted RBP10.98□□□□□ -0.65
ATXN3-233ENST00000555816 SAMD7Q7Z3H4 446 aa10.96□□□□□ -0.65
ATXN3-233ENST00000555816 KCNV2Q8TDN2 545 aa10.96□□□□□ -0.65
ATXN3-233ENST00000555816 CDHR5Q9HBB8 845 aa10.96□□□□□ -0.65
ATXN3-233ENST00000555816 NUDT18Q6ZVK8 323 aa10.95□□□□□ -0.66
ATXN3-233ENST00000555816 SMAPO00193 183 aa10.94□□□□□ -0.66
ATXN3-233ENST00000555816 SLC4A3P48751 1232 aa10.92□□□□□ -0.66
ATXN3-233ENST00000555816 C3orf80F5H4A9 247 aa10.9□□□□□ -0.66
ATXN3-233ENST00000555816 PADI6Q6TGC4 694 aa10.9□□□□□ -0.66
ATXN3-233ENST00000555816 SLF2Q8IX21 1173 aa10.9□□□□□ -0.66
ATXN3-233ENST00000555816 CCDC180Q9P1Z9 1646 aa10.9□□□□□ -0.66
ATXN3-233ENST00000555816 MLLT3P42568 568 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-233ENST00000555816 EYA1Q99502 592 aa10.88□□□□□ -0.67
ATXN3-233ENST00000555816 PTGDRQ13258 359 aa10.87□□□□□ -0.67
ATXN3-233ENST00000555816 TJAP1Q5JTD0 557 aa10.87□□□□□ -0.67
ATXN3-233ENST00000555816 IL21Q9HBE4 155 aa10.87□□□□□ -0.67
ATXN3-233ENST00000555816 PLCB2Q00722 1185 aa10.86□□□□□ -0.67
ATXN3-233ENST00000555816 IRX2Q9BZI1 471 aaPredicted RBP10.86□□□□□ -0.67
ATXN3-233ENST00000555816 PRR14Q9BWN1 585 aa10.85□□□□□ -0.67
ATXN3-233ENST00000555816 SWT1Q5T5J6 900 aaKnown RBP10.83□□□□□ -0.68
ATXN3-233ENST00000555816 RBM46Q8TBY0 533 aaKnown RBP10.83□□□□□ -0.68
ATXN3-233ENST00000555816 SMYD5Q6GMV2 418 aa10.82□□□□□ -0.68
ATXN3-233ENST00000555816 MTRQ99707 1265 aa10.82□□□□□ -0.68
ATXN3-233ENST00000555816 NUTM2FA1L443 756 aa10.81□□□□□ -0.68
ATXN3-233ENST00000555816 RNF40O75150 1001 aa10.81□□□□□ -0.68
ATXN3-233ENST00000555816 DNAJB2P25686 324 aa10.81□□□□□ -0.68
ATXN3-233ENST00000555816 FCHSD2O94868 740 aa10.8□□□□□ -0.68
ATXN3-233ENST00000555816 APLP1P51693 650 aa10.8□□□□□ -0.68
ATXN3-233ENST00000555816 SEMA3EO15041 775 aa10.78□□□□□ -0.68
ATXN3-233ENST00000555816 ADGRG1Q9Y653 693 aa10.78□□□□□ -0.68
ATXN3-233ENST00000555816 OATP04181 439 aa10.76□□□□□ -0.69
ATXN3-233ENST00000555816 TMEM134Q9H6X4 195 aa10.76□□□□□ -0.69
ATXN3-233ENST00000555816 LAPTM4AQ15012 233 aa10.75□□□□□ -0.69
ATXN3-233ENST00000555816 TESPA1A2RU30 521 aaPredicted RBP10.74□□□□□ -0.69
ATXN3-233ENST00000555816 GGCXP38435 758 aa10.74□□□□□ -0.69
ATXN3-233ENST00000555816 HIC1Q14526 733 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms