RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 NUDCQ9Y266 331 aa21.94■■□□□ 1.1
TUBB3-209ENST00000555609 RNF123Q5XPI4 1314 aa21.93■■□□□ 1.1
TUBB3-209ENST00000555609 RALBP1Q15311 655 aa21.92■■□□□ 1.1
TUBB3-209ENST00000555609 ZNF326Q5BKZ1 582 aaKnown RBP21.92■■□□□ 1.1
TUBB3-209ENST00000555609 BRD4O60885 1362 aaPredicted RBP21.91■■□□□ 1.1
TUBB3-209ENST00000555609 SAMD9LQ8IVG5 1584 aa21.9■■□□□ 1.1
TUBB3-209ENST00000555609 FAM135AQ9P2D6 1515 aa21.9■■□□□ 1.1
TUBB3-209ENST00000555609 PNISRQ8TF01 805 aaKnown RBP21.9■■□□□ 1.1
TUBB3-209ENST00000555609 HNRNPMP52272 730 aaKnown RBP eCLIP21.89■■□□□ 1.09
TUBB3-209ENST00000555609 PLEKHH2Q8IVE3 1493 aa21.88■■□□□ 1.09
TUBB3-209ENST00000555609 CDC42BPBQ9Y5S2 1711 aa21.87■■□□□ 1.09
TUBB3-209ENST00000555609 UNC13BO14795 1591 aa21.86■■□□□ 1.09
TUBB3-209ENST00000555609 TMC1Q8TDI8 760 aa21.86■■□□□ 1.09
TUBB3-209ENST00000555609 MYBBP1AQ9BQG0 1328 aaKnown RBP21.86■■□□□ 1.09
TUBB3-209ENST00000555609 LRPPRCP42704 1394 aaKnown RBP21.86■■□□□ 1.09
TUBB3-209ENST00000555609 E9PCH4 1651 aa21.85■■□□□ 1.09
TUBB3-209ENST00000555609 LAMC1P11047 1609 aa21.85■■□□□ 1.09
TUBB3-209ENST00000555609 ST20-MTHFSA0A0A6YYL1 179 aa21.84■■□□□ 1.09
TUBB3-209ENST00000555609 DCAF11Q8TEB1 546 aa21.84■■□□□ 1.09
TUBB3-209ENST00000555609 CCDC144AA2RUR9 1427 aa21.84■■□□□ 1.09
TUBB3-209ENST00000555609 PRAG1Q86YV5 1406 aa21.84■■□□□ 1.09
TUBB3-209ENST00000555609 GPRASP1Q5JY77 1395 aa21.84■■□□□ 1.09
TUBB3-209ENST00000555609 POLR3GLQ9BT43 218 aa21.83■■□□□ 1.09
TUBB3-209ENST00000555609 PLXNC1O60486 1568 aa21.82■■□□□ 1.08
TUBB3-209ENST00000555609 TRPM1Q7Z4N2 1603 aa21.82■■□□□ 1.08
TUBB3-209ENST00000555609 WASHC2CQ9Y4E1 1318 aa21.82■■□□□ 1.08
TUBB3-209ENST00000555609 INSRP06213 1382 aa21.8■■□□□ 1.08
TUBB3-209ENST00000555609 ATP10AO60312 1499 aa21.8■■□□□ 1.08
TUBB3-209ENST00000555609 KDM2AQ9Y2K7 1162 aa21.79■■□□□ 1.08
TUBB3-209ENST00000555609 B4GALNT3Q6L9W6 998 aa21.78■■□□□ 1.08
TUBB3-209ENST00000555609 IQGAP3Q86VI3 1631 aa21.78■■□□□ 1.08
TUBB3-209ENST00000555609 EIF2AK4Q9P2K8 1649 aaKnown RBP21.77■■□□□ 1.08
TUBB3-209ENST00000555609 MSH5O43196 834 aa21.77■■□□□ 1.08
TUBB3-209ENST00000555609 ARHGAP5Q13017 1502 aa21.76■■□□□ 1.07
TUBB3-209ENST00000555609 SYCP2Q9BX26 1530 aa21.76■■□□□ 1.07
TUBB3-209ENST00000555609 DUOX2Q9NRD8 1548 aa21.76■■□□□ 1.07
TUBB3-209ENST00000555609 ZMYM4Q5VZL5 1548 aa21.75■■□□□ 1.07
TUBB3-209ENST00000555609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.75■■□□□ 1.07
TUBB3-209ENST00000555609 PARD3Q8TEW0 1356 aa21.74■■□□□ 1.07
TUBB3-209ENST00000555609 PDE3BQ13370 1112 aa21.74■■□□□ 1.07
TUBB3-209ENST00000555609 NLRP13Q86W25 1043 aa21.74■■□□□ 1.07
TUBB3-209ENST00000555609 PLA2R1Q13018 1463 aa21.74■■□□□ 1.07
TUBB3-209ENST00000555609 MAGI2Q86UL8 1455 aa21.74■■□□□ 1.07
TUBB3-209ENST00000555609 ABCC2Q92887 1545 aa21.73■■□□□ 1.07
TUBB3-209ENST00000555609 ERBINQ96RT1 1412 aa21.73■■□□□ 1.07
TUBB3-209ENST00000555609 PRDM15P57071 1507 aaPredicted RBP21.72■■□□□ 1.07
TUBB3-209ENST00000555609 MYO5CQ9NQX4 1742 aa21.72■■□□□ 1.07
TUBB3-209ENST00000555609 TTC37Q6PGP7 1564 aa21.72■■□□□ 1.07
TUBB3-209ENST00000555609 A2MP01023 1474 aa21.71■■□□□ 1.07
TUBB3-209ENST00000555609 COL17A1Q9UMD9 1497 aaPredicted RBP21.71■■□□□ 1.07
TUBB3-209ENST00000555609 ERICH6Q7L0X2 663 aa21.7■■□□□ 1.06
TUBB3-209ENST00000555609 MYT1LQ9UL68 1186 aa21.69■■□□□ 1.06
TUBB3-209ENST00000555609 PER1O15534 1290 aaPredicted RBP21.67■■□□□ 1.06
TUBB3-209ENST00000555609 CCDC136Q96JN2 1154 aa21.67■■□□□ 1.06
TUBB3-209ENST00000555609 STAC3Q96MF2 364 aa21.67■■□□□ 1.06
TUBB3-209ENST00000555609 PLCH2O75038 1416 aa21.65■■□□□ 1.06
TUBB3-209ENST00000555609 UHRF1BP1LA0JNW5 1464 aa21.64■■□□□ 1.05
TUBB3-209ENST00000555609 TESK2Q96S53 571 aa21.62■■□□□ 1.05
TUBB3-209ENST00000555609 TMF1P82094 1093 aa21.62■■□□□ 1.05
TUBB3-209ENST00000555609 CNGB1Q14028 1251 aaPredicted RBP21.62■■□□□ 1.05
TUBB3-209ENST00000555609 EFCAB2Q5VUJ9 269 aa21.61■■□□□ 1.05
TUBB3-209ENST00000555609 NBPF1Q3BBV0 1214 aa21.6■■□□□ 1.05
TUBB3-209ENST00000555609 RNF17Q9BXT8 1623 aaKnown RBP21.59■■□□□ 1.05
TUBB3-209ENST00000555609 RRP1P56182 461 aaKnown RBP21.59■■□□□ 1.05
TUBB3-209ENST00000555609 RGL3Q3MIN7 710 aa21.59■■□□□ 1.05
TUBB3-209ENST00000555609 ARAP3Q8WWN8 1544 aa21.59■■□□□ 1.05
TUBB3-209ENST00000555609 RTEL1-TNFRSF6BF6WH68 1400 aa21.59■■□□□ 1.05
TUBB3-209ENST00000555609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.58■■□□□ 1.05
TUBB3-209ENST00000555609 BLMP54132 1417 aaPredicted RBP21.57■■□□□ 1.04
TUBB3-209ENST00000555609 ABCC1P33527 1531 aa21.56■■□□□ 1.04
TUBB3-209ENST00000555609 RCAN3Q9UKA8 241 aa21.56■■□□□ 1.04
TUBB3-209ENST00000555609 NPM1P06748 294 aaKnown RBP eCLIP21.55■■□□□ 1.04
TUBB3-209ENST00000555609 DISP3Q9P2K9 1392 aa21.55■■□□□ 1.04
TUBB3-209ENST00000555609 ZCCHC11Q5TAX3 1644 aaKnown RBP21.53■■□□□ 1.04
TUBB3-209ENST00000555609 CDCA8Q53HL2 280 aa21.52■■□□□ 1.04
TUBB3-209ENST00000555609 TRHP20396 242 aaPredicted RBP21.52■■□□□ 1.03
TUBB3-209ENST00000555609 PANK3Q9H999 370 aa21.52■■□□□ 1.03
TUBB3-209ENST00000555609 SCAPERQ9BY12 1400 aa21.51■■□□□ 1.03
TUBB3-209ENST00000555609 PTPRTO14522 1441 aa21.5■■□□□ 1.03
TUBB3-209ENST00000555609 TRPM2O94759 1503 aa21.5■■□□□ 1.03
TUBB3-209ENST00000555609 NEURL4Q96JN8 1562 aa21.5■■□□□ 1.03
TUBB3-209ENST00000555609 SLC24A1O60721 1099 aa21.49■■□□□ 1.03
TUBB3-209ENST00000555609 NOP58Q9Y2X3 529 aaKnown RBP21.49■■□□□ 1.03
TUBB3-209ENST00000555609 TCERG1O14776 1098 aaKnown RBP21.48■■□□□ 1.03
TUBB3-209ENST00000555609 ANP32AP39687 249 aaKnown RBP21.48■■□□□ 1.03
TUBB3-209ENST00000555609 MADDQ8WXG6 1647 aa21.47■■□□□ 1.03
TUBB3-209ENST00000555609 IQGAP1P46940 1657 aa21.47■■□□□ 1.03
TUBB3-209ENST00000555609 TRAPPC8Q9Y2L5 1435 aa21.46■■□□□ 1.03
TUBB3-209ENST00000555609 SPAG9O60271 1321 aaKnown RBP21.45■■□□□ 1.02
TUBB3-209ENST00000555609 DEPDC5O75140 1603 aa21.45■■□□□ 1.02
TUBB3-209ENST00000555609 ASXL2Q76L83 1435 aa21.45■■□□□ 1.02
TUBB3-209ENST00000555609 SCAF11Q99590 1463 aaKnown RBP21.44■■□□□ 1.02
TUBB3-209ENST00000555609 MS4A1P11836 297 aa21.44■■□□□ 1.02
TUBB3-209ENST00000555609 NPC1L1Q9UHC9 1359 aa21.44■■□□□ 1.02
TUBB3-209ENST00000555609 WDR7Q9Y4E6 1490 aa21.44■■□□□ 1.02
TUBB3-209ENST00000555609 CEP152O94986 1710 aa21.44■■□□□ 1.02
TUBB3-209ENST00000555609 SPHKAPQ2M3C7 1700 aa21.44■■□□□ 1.02
TUBB3-209ENST00000555609 CC2D1BQ5T0F9 858 aaKnown RBP21.43■■□□□ 1.02
TUBB3-209ENST00000555609 IPO9Q96P70 1041 aaKnown RBP21.43■■□□□ 1.02
TUBB3-209ENST00000555609 SYNMO15061 1565 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms