RNA–Protein interactions for RNA: ENST00000555554.1

CASC1-209, Transcript of cancer susceptibility 1, humanhuman

TSL 3

Gene CASC1, Length 403 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-209ENST00000555554 ZBED2Q9BTP6 218 aa10.46□□□□□ -0.73
CASC1-209ENST00000555554 SLC4A5Q9BY07 1137 aa10.46□□□□□ -0.73
CASC1-209ENST00000555554 HCSTQ9UBK5 93 aa10.45□□□□□ -0.74
CASC1-209ENST00000555554 PHF14O94880 888 aa10.43□□□□□ -0.74
CASC1-209ENST00000555554 TYW1BQ6NUM6 668 aa10.42□□□□□ -0.74
CASC1-209ENST00000555554 BHMG1C9JSJ3 638 aaPredicted RBP10.41□□□□□ -0.74
CASC1-209ENST00000555554 PPP1R3GB7ZBB8 358 aa10.4□□□□□ -0.74
CASC1-209ENST00000555554 FBXW7Q969H0 707 aa10.4□□□□□ -0.74
CASC1-209ENST00000555554 COL9A1P20849 921 aa10.39□□□□□ -0.75
CASC1-209ENST00000555554 PROX2Q3B8N5 592 aa10.37□□□□□ -0.75
CASC1-209ENST00000555554 PLA2G2EQ9NZK7 142 aa10.37□□□□□ -0.75
CASC1-209ENST00000555554 P3H3Q8IVL6 736 aa10.36□□□□□ -0.75
CASC1-209ENST00000555554 MRPL50Q8N5N7 158 aaKnown RBP10.36□□□□□ -0.75
CASC1-209ENST00000555554 DDX12PQ92771 950 aa10.36□□□□□ -0.75
CASC1-209ENST00000555554 EPAS1Q99814 870 aa10.36□□□□□ -0.75
CASC1-209ENST00000555554 PDIA6Q15084 440 aa10.35□□□□□ -0.75
CASC1-209ENST00000555554 NBPF3Q9H094 633 aa10.35□□□□□ -0.75
CASC1-209ENST00000555554 RBM33Q96EV2 1170 aaKnown RBP10.34□□□□□ -0.75
CASC1-209ENST00000555554 GOLGA8CPA6NN73 597 aa10.33□□□□□ -0.76
CASC1-209ENST00000555554 PTPN5P54829 565 aa10.33□□□□□ -0.76
CASC1-209ENST00000555554 E2F4Q16254 413 aa10.33□□□□□ -0.76
CASC1-209ENST00000555554 C6orf132Q5T0Z8 1188 aa10.33□□□□□ -0.76
CASC1-209ENST00000555554 THSD4Q6ZMP0 1018 aa10.33□□□□□ -0.76
CASC1-209ENST00000555554 WNT2BQ93097 391 aa10.32□□□□□ -0.76
CASC1-209ENST00000555554 RABGEF1Q9UJ41 708 aa10.32□□□□□ -0.76
CASC1-209ENST00000555554 WDR70Q9NW82 654 aa10.31□□□□□ -0.76
CASC1-209ENST00000555554 SPDYE16A6NNV3 312 aaPredicted RBP10.29□□□□□ -0.76
CASC1-209ENST00000555554 EN1Q05925 392 aaPredicted RBP10.28□□□□□ -0.76
CASC1-209ENST00000555554 TSR1Q2NL82 804 aaKnown RBP10.27□□□□□ -0.77
CASC1-209ENST00000555554 KIAA1468Q9P260 1216 aa10.27□□□□□ -0.77
CASC1-209ENST00000555554 MAP3K7O43318 606 aa10.26□□□□□ -0.77
CASC1-209ENST00000555554 ARIH1Q9Y4X5 557 aaPredicted RBP10.26□□□□□ -0.77
CASC1-209ENST00000555554 TRIM6-TRIM34B2RNG4 842 aa10.25□□□□□ -0.77
CASC1-209ENST00000555554 PRIM1P49642 420 aaKnown RBP10.24□□□□□ -0.77
CASC1-209ENST00000555554 SEPT9Q9UHD8 586 aaPredicted RBP10.24□□□□□ -0.77
CASC1-209ENST00000555554 GRXCR2A6NFK2 248 aa10.23□□□□□ -0.77
CASC1-209ENST00000555554 ONECUT3O60422 494 aaPredicted RBP10.23□□□□□ -0.77
CASC1-209ENST00000555554 ANKK1Q8NFD2 765 aa10.23□□□□□ -0.77
CASC1-209ENST00000555554 LAPTM4BQ86VI4 370 aa10.22□□□□□ -0.77
CASC1-209ENST00000555554 BCAMP50895 628 aa10.21□□□□□ -0.77
CASC1-209ENST00000555554 ZFRQ96KR1 1074 aaKnown RBP10.2□□□□□ -0.78
CASC1-209ENST00000555554 TSKSQ9UJT2 592 aa10.2□□□□□ -0.78
CASC1-209ENST00000555554 SOWAHBA6NEL2 793 aa10.18□□□□□ -0.78
CASC1-209ENST00000555554 TULP1O00294 542 aaPredicted RBP10.16□□□□□ -0.78
CASC1-209ENST00000555554 OSBPP22059 807 aa10.16□□□□□ -0.78
CASC1-209ENST00000555554 FAM98CQ17RN3 349 aaKnown RBP10.16□□□□□ -0.78
CASC1-209ENST00000555554 CDHR5Q9HBB8 845 aa10.16□□□□□ -0.78
CASC1-209ENST00000555554 PACS2Q86VP3 889 aa10.15□□□□□ -0.78
CASC1-209ENST00000555554 CDCA7LQ96GN5 454 aa10.15□□□□□ -0.78
CASC1-209ENST00000555554 PRSS12P56730 875 aa10.14□□□□□ -0.79
CASC1-209ENST00000555554 FAM198AQ9UFP1 575 aa10.14□□□□□ -0.79
CASC1-209ENST00000555554 SMAPO00193 183 aa10.13□□□□□ -0.79
CASC1-209ENST00000555554 IFFO2Q5TF58 517 aa10.13□□□□□ -0.79
CASC1-209ENST00000555554 KCNV2Q8TDN2 545 aa10.13□□□□□ -0.79
CASC1-209ENST00000555554 WBP1LQ9NX94 342 aa10.13□□□□□ -0.79
CASC1-209ENST00000555554 CERKQ8TCT0 537 aa10.12□□□□□ -0.79
CASC1-209ENST00000555554 C3orf80F5H4A9 247 aa10.11□□□□□ -0.79
CASC1-209ENST00000555554 LRCH3Q96II8 777 aa10.11□□□□□ -0.79
CASC1-209ENST00000555554 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.11□□□□□ -0.79
CASC1-209ENST00000555554 HPS5Q9UPZ3 1129 aa10.1□□□□□ -0.79
CASC1-209ENST00000555554 ARHGEF1Q92888 912 aaKnown RBP10.09□□□□□ -0.79
CASC1-209ENST00000555554 A0A0G2JS52 829 aa10.08□□□□□ -0.8
CASC1-209ENST00000555554 MLLT3P42568 568 aaPredicted RBP10.08□□□□□ -0.8
CASC1-209ENST00000555554 NBPF26B4DH59 902 aa10.07□□□□□ -0.8
CASC1-209ENST00000555554 ITGBL1O95965 494 aaPredicted RBP10.07□□□□□ -0.8
CASC1-209ENST00000555554 NYAP1Q6ZVC0 841 aa10.07□□□□□ -0.8
CASC1-209ENST00000555554 TATDN2Q93075 761 aa10.07□□□□□ -0.8
CASC1-209ENST00000555554 TSR3Q9UJK0 312 aaKnown RBP10.07□□□□□ -0.8
CASC1-209ENST00000555554 PNMA3Q9UL41 463 aa10.07□□□□□ -0.8
CASC1-209ENST00000555554 LMOD2Q6P5Q4 547 aa10.06□□□□□ -0.8
CASC1-209ENST00000555554 SAMD7Q7Z3H4 446 aa10.06□□□□□ -0.8
CASC1-209ENST00000555554 ERICH6Q7L0X2 663 aa10.05□□□□□ -0.8
CASC1-209ENST00000555554 NPDC1Q9NQX5 325 aaPredicted RBP10.05□□□□□ -0.8
CASC1-209ENST00000555554 RBM27Q9P2N5 1060 aaKnown RBP10.05□□□□□ -0.8
CASC1-209ENST00000555554 PADI6Q6TGC4 694 aa10.04□□□□□ -0.8
CASC1-209ENST00000555554 NUDT18Q6ZVK8 323 aa10.04□□□□□ -0.8
CASC1-209ENST00000555554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.04□□□□□ -0.8
CASC1-209ENST00000555554 TMEM132AQ24JP5 1023 aa10.02□□□□□ -0.81
CASC1-209ENST00000555554 TTC13Q8NBP0 860 aa10.02□□□□□ -0.81
CASC1-209ENST00000555554 PPP4CP60510 307 aa10□□□□□ -0.81
CASC1-209ENST00000555554 RNF40O75150 1001 aa9.98□□□□□ -0.81
CASC1-209ENST00000555554 RGS20O76081 388 aa9.98□□□□□ -0.81
CASC1-209ENST00000555554 KCNC4Q03721 635 aa9.98□□□□□ -0.81
CASC1-209ENST00000555554 GTF3C3Q9Y5Q9 886 aa9.96□□□□□ -0.82
CASC1-209ENST00000555554 SMYD5Q6GMV2 418 aa9.95□□□□□ -0.82
CASC1-209ENST00000555554 PTGDRQ13258 359 aa9.94□□□□□ -0.82
CASC1-209ENST00000555554 SWT1Q5T5J6 900 aaKnown RBP9.94□□□□□ -0.82
CASC1-209ENST00000555554 TESPA1A2RU30 521 aaPredicted RBP9.93□□□□□ -0.82
CASC1-209ENST00000555554 SEMA3EO15041 775 aa9.93□□□□□ -0.82
CASC1-209ENST00000555554 HDGFP51858 240 aaKnown RBP9.92□□□□□ -0.82
CASC1-209ENST00000555554 TJAP1Q5JTD0 557 aa9.92□□□□□ -0.82
CASC1-209ENST00000555554 EYA1Q99502 592 aa9.92□□□□□ -0.82
CASC1-209ENST00000555554 NUTM2FA1L443 756 aa9.91□□□□□ -0.82
CASC1-209ENST00000555554 APLP1P51693 650 aa9.91□□□□□ -0.82
CASC1-209ENST00000555554 MTRQ99707 1265 aa9.91□□□□□ -0.82
CASC1-209ENST00000555554 ZC3H15Q8WU90 426 aaKnown RBP9.89□□□□□ -0.83
CASC1-209ENST00000555554 SLF2Q8IX21 1173 aa9.88□□□□□ -0.83
CASC1-209ENST00000555554 IRX2Q9BZI1 471 aaPredicted RBP9.88□□□□□ -0.83
CASC1-209ENST00000555554 IL21Q9HBE4 155 aa9.87□□□□□ -0.83
CASC1-209ENST00000555554 ADGRG1Q9Y653 693 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms