RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ANKRD30AQ9BXX3 1397 aa20.62■□□□□ 0.89
SYNE3-203ENST00000554873 KDM5CP41229 1560 aa20.62■□□□□ 0.89
SYNE3-203ENST00000554873 PLB1Q6P1J6 1458 aa20.61■□□□□ 0.89
SYNE3-203ENST00000554873 KIF14Q15058 1648 aa20.6■□□□□ 0.89
SYNE3-203ENST00000554873 PLEKHG5O94827 1062 aa20.6■□□□□ 0.89
SYNE3-203ENST00000554873 ITSN2Q9NZM3 1697 aa20.59■□□□□ 0.89
SYNE3-203ENST00000554873 ANKRD50Q9ULJ7 1429 aa20.59■□□□□ 0.89
SYNE3-203ENST00000554873 TMC1Q8TDI8 760 aa20.59■□□□□ 0.89
SYNE3-203ENST00000554873 UHRF1BP1Q6BDS2 1440 aa20.58■□□□□ 0.88
SYNE3-203ENST00000554873 CARD11Q9BXL7 1154 aa20.58■□□□□ 0.88
SYNE3-203ENST00000554873 RRP9O43818 475 aaKnown RBP20.57■□□□□ 0.88
SYNE3-203ENST00000554873 ROCK2O75116 1388 aaKnown RBP20.57■□□□□ 0.88
SYNE3-203ENST00000554873 HSP90AA2PQ14568 343 aaPredicted RBP20.56■□□□□ 0.88
SYNE3-203ENST00000554873 CROCC2H7BZ55 1655 aa20.56■□□□□ 0.88
SYNE3-203ENST00000554873 NUP155O75694 1391 aa20.56■□□□□ 0.88
SYNE3-203ENST00000554873 RALGAPBQ86X10 1494 aa20.55■□□□□ 0.88
SYNE3-203ENST00000554873 RRAGDQ9NQL2 400 aaPredicted RBP20.54■□□□□ 0.88
SYNE3-203ENST00000554873 DAXXQ9UER7 740 aaPredicted RBP20.54■□□□□ 0.88
SYNE3-203ENST00000554873 KDM2AQ9Y2K7 1162 aa20.54■□□□□ 0.88
SYNE3-203ENST00000554873 ADCY10Q96PN6 1610 aa20.54■□□□□ 0.88
SYNE3-203ENST00000554873 ST20-MTHFSA0A0A6YYL1 179 aa20.53■□□□□ 0.88
SYNE3-203ENST00000554873 KIF15Q9NS87 1388 aa20.52■□□□□ 0.88
SYNE3-203ENST00000554873 CHMP7Q8WUX9 453 aaPredicted RBP20.51■□□□□ 0.87
SYNE3-203ENST00000554873 EXOC6Q8TAG9 804 aa20.5■□□□□ 0.87
SYNE3-203ENST00000554873 LRPPRCP42704 1394 aaKnown RBP20.49■□□□□ 0.87
SYNE3-203ENST00000554873 EIF4G3O43432 1585 aaKnown RBP20.49■□□□□ 0.87
SYNE3-203ENST00000554873 RRP1P56182 461 aaKnown RBP20.49■□□□□ 0.87
SYNE3-203ENST00000554873 PLEKHD1A6NEE1 506 aa20.49■□□□□ 0.87
SYNE3-203ENST00000554873 FRAT2O75474 233 aaPredicted RBP20.49■□□□□ 0.87
SYNE3-203ENST00000554873 C9orf84Q5VXU9 1444 aa20.48■□□□□ 0.87
SYNE3-203ENST00000554873 HSP90AA1P07900 732 aaKnown RBP20.48■□□□□ 0.87
SYNE3-203ENST00000554873 JPH4Q96JJ6 628 aa20.48■□□□□ 0.87
SYNE3-203ENST00000554873 ARHGEF12Q9NZN5 1544 aa20.47■□□□□ 0.87
SYNE3-203ENST00000554873 SLC4A3P48751 1232 aa20.47■□□□□ 0.87
SYNE3-203ENST00000554873 CEP170Q5SW79 1584 aa20.47■□□□□ 0.87
SYNE3-203ENST00000554873 BRD4O60885 1362 aaPredicted RBP20.47■□□□□ 0.87
SYNE3-203ENST00000554873 MYBBP1AQ9BQG0 1328 aaKnown RBP20.47■□□□□ 0.87
SYNE3-203ENST00000554873 RALBP1Q15311 655 aa20.47■□□□□ 0.87
SYNE3-203ENST00000554873 TSPY4P0CV99 314 aa20.46■□□□□ 0.87
SYNE3-203ENST00000554873 TSPY10P0CW01 314 aa20.46■□□□□ 0.87
SYNE3-203ENST00000554873 FBLN2P98095 1184 aa20.46■□□□□ 0.87
SYNE3-203ENST00000554873 SLC24A1O60721 1099 aa20.45■□□□□ 0.86
SYNE3-203ENST00000554873 CARMIL2Q6F5E8 1435 aa20.45■□□□□ 0.86
SYNE3-203ENST00000554873 NAP1L5Q96NT1 182 aaPredicted RBP20.45■□□□□ 0.86
SYNE3-203ENST00000554873 CDC42BPAQ5VT25 1732 aa20.44■□□□□ 0.86
SYNE3-203ENST00000554873 SHANK2Q9UPX8 1470 aa20.44■□□□□ 0.86
SYNE3-203ENST00000554873 ABCC10Q5T3U5 1492 aa20.44■□□□□ 0.86
SYNE3-203ENST00000554873 KTN1Q86UP2 1357 aaKnown RBP20.43■□□□□ 0.86
SYNE3-203ENST00000554873 MAGI1Q96QZ7 1491 aaPredicted RBP20.43■□□□□ 0.86
SYNE3-203ENST00000554873 HNRNPMP52272 730 aaKnown RBP eCLIP20.42■□□□□ 0.86
SYNE3-203ENST00000554873 KDM5DQ9BY66 1539 aa20.42■□□□□ 0.86
SYNE3-203ENST00000554873 SYNJ2O15056 1496 aa20.41■□□□□ 0.86
SYNE3-203ENST00000554873 L1TD1Q5T7N2 865 aaKnown RBP20.41■□□□□ 0.86
SYNE3-203ENST00000554873 PNNQ9H307 717 aaKnown RBP20.4■□□□□ 0.86
SYNE3-203ENST00000554873 PTPRGP23470 1445 aa20.4■□□□□ 0.86
SYNE3-203ENST00000554873 ATP10BO94823 1461 aa20.4■□□□□ 0.86
SYNE3-203ENST00000554873 RCAN3Q9UKA8 241 aa20.36■□□□□ 0.85
SYNE3-203ENST00000554873 CLCN1P35523 988 aa20.36■□□□□ 0.85
SYNE3-203ENST00000554873 NLRP13Q86W25 1043 aa20.36■□□□□ 0.85
SYNE3-203ENST00000554873 E9PCH4 1651 aa20.36■□□□□ 0.85
SYNE3-203ENST00000554873 ABCA8O94911 1581 aa20.35■□□□□ 0.85
SYNE3-203ENST00000554873 NUP160Q12769 1436 aa20.35■□□□□ 0.85
SYNE3-203ENST00000554873 PARD3Q8TEW0 1356 aa20.34■□□□□ 0.85
SYNE3-203ENST00000554873 PER1O15534 1290 aaPredicted RBP20.34■□□□□ 0.85
SYNE3-203ENST00000554873 NBPF1Q3BBV0 1214 aa20.33■□□□□ 0.84
SYNE3-203ENST00000554873 PRAG1Q86YV5 1406 aa20.31■□□□□ 0.84
SYNE3-203ENST00000554873 PDE3BQ13370 1112 aa20.31■□□□□ 0.84
SYNE3-203ENST00000554873 RGL3Q3MIN7 710 aa20.31■□□□□ 0.84
SYNE3-203ENST00000554873 POGKQ9P215 609 aa20.31■□□□□ 0.84
SYNE3-203ENST00000554873 FAM135AQ9P2D6 1515 aa20.3■□□□□ 0.84
SYNE3-203ENST00000554873 ARHGEF5Q12774 1597 aa20.3■□□□□ 0.84
SYNE3-203ENST00000554873 CDCA7LQ96GN5 454 aa20.29■□□□□ 0.84
SYNE3-203ENST00000554873 TRPM1Q7Z4N2 1603 aa20.27■□□□□ 0.84
SYNE3-203ENST00000554873 CCDC144AA2RUR9 1427 aa20.27■□□□□ 0.84
SYNE3-203ENST00000554873 FAM161AQ3B820 660 aa20.26■□□□□ 0.83
SYNE3-203ENST00000554873 SKAP1Q86WV1 359 aa20.26■□□□□ 0.83
SYNE3-203ENST00000554873 CCDC141Q6ZP82 1450 aa20.25■□□□□ 0.83
SYNE3-203ENST00000554873 CC2D1BQ5T0F9 858 aaKnown RBP20.25■□□□□ 0.83
SYNE3-203ENST00000554873 TESK2Q96S53 571 aa20.24■□□□□ 0.83
SYNE3-203ENST00000554873 ERCC6Q03468 1493 aa20.24■□□□□ 0.83
SYNE3-203ENST00000554873 PLA2R1Q13018 1463 aa20.24■□□□□ 0.83
SYNE3-203ENST00000554873 GPRASP1Q5JY77 1395 aa20.24■□□□□ 0.83
SYNE3-203ENST00000554873 RSPH4AQ5TD94 716 aa20.24■□□□□ 0.83
SYNE3-203ENST00000554873 CENPJQ9HC77 1338 aaPredicted RBP20.23■□□□□ 0.83
SYNE3-203ENST00000554873 SAMD9LQ8IVG5 1584 aa20.23■□□□□ 0.83
SYNE3-203ENST00000554873 DISP3Q9P2K9 1392 aa20.22■□□□□ 0.83
SYNE3-203ENST00000554873 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.22■□□□□ 0.83
SYNE3-203ENST00000554873 PANK3Q9H999 370 aa20.22■□□□□ 0.83
SYNE3-203ENST00000554873 C8orf34Q49A92 452 aa20.22■□□□□ 0.83
SYNE3-203ENST00000554873 A2MP01023 1474 aa20.21■□□□□ 0.83
SYNE3-203ENST00000554873 PLIN1O60240 522 aa20.21■□□□□ 0.83
SYNE3-203ENST00000554873 CDC42BPBQ9Y5S2 1711 aa20.2■□□□□ 0.82
SYNE3-203ENST00000554873 COL17A1Q9UMD9 1497 aaPredicted RBP20.2■□□□□ 0.82
SYNE3-203ENST00000554873 RBM10P98175 930 aaKnown RBP20.19■□□□□ 0.82
SYNE3-203ENST00000554873 PDCL3Q9H2J4 239 aa20.18■□□□□ 0.82
SYNE3-203ENST00000554873 XRCC6P12956 609 aaKnown RBP eCLIP20.18■□□□□ 0.82
SYNE3-203ENST00000554873 CALD1Q05682 793 aaKnown RBP20.18■□□□□ 0.82
SYNE3-203ENST00000554873 KDM2BQ8NHM5 1336 aa20.17■□□□□ 0.82
SYNE3-203ENST00000554873 BLMP54132 1417 aaPredicted RBP20.17■□□□□ 0.82
SYNE3-203ENST00000554873 CRBNQ96SW2 442 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms