RNA–Protein interactions for RNA: ENST00000554821.1

CFAP54-207, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 474 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-207ENST00000554821 ZNF775Q96BV0 537 aaPredicted RBP9.51□□□□□ -0.89
CFAP54-207ENST00000554821 JPH4Q96JJ6 628 aa9.51□□□□□ -0.89
CFAP54-207ENST00000554821 EMILIN3Q9NT22 766 aa9.5□□□□□ -0.89
CFAP54-207ENST00000554821 E2F4Q16254 413 aa9.48□□□□□ -0.89
CFAP54-207ENST00000554821 LOC100996750A0A140TA64 210 aa9.47□□□□□ -0.89
CFAP54-207ENST00000554821 NRG2O14511 850 aaPredicted RBP9.47□□□□□ -0.89
CFAP54-207ENST00000554821 FOSBP53539 338 aa9.47□□□□□ -0.89
CFAP54-207ENST00000554821 ZNF454Q8N9F8 522 aa9.47□□□□□ -0.89
CFAP54-207ENST00000554821 KRTAP4-6Q9BYQ5 205 aa9.47□□□□□ -0.89
CFAP54-207ENST00000554821 ARIH1Q9Y4X5 557 aaPredicted RBP9.47□□□□□ -0.89
CFAP54-207ENST00000554821 SPDYE16A6NNV3 312 aaPredicted RBP9.46□□□□□ -0.9
CFAP54-207ENST00000554821 MRPL50Q8N5N7 158 aaKnown RBP9.46□□□□□ -0.9
CFAP54-207ENST00000554821 PLCB2Q00722 1185 aa9.45□□□□□ -0.9
CFAP54-207ENST00000554821 FBXW7Q969H0 707 aa9.45□□□□□ -0.9
CFAP54-207ENST00000554821 BCL2L12Q9HB09 334 aa9.45□□□□□ -0.9
CFAP54-207ENST00000554821 DPYSL4O14531 572 aa9.43□□□□□ -0.9
CFAP54-207ENST00000554821 PHF14O94880 888 aa9.43□□□□□ -0.9
CFAP54-207ENST00000554821 ZDHHC16Q969W1 377 aa9.43□□□□□ -0.9
CFAP54-207ENST00000554821 PTPREP23469 700 aa9.42□□□□□ -0.9
CFAP54-207ENST00000554821 PDIA6Q15084 440 aa9.42□□□□□ -0.9
CFAP54-207ENST00000554821 EPAS1Q99814 870 aa9.42□□□□□ -0.9
CFAP54-207ENST00000554821 TYW1BQ6NUM6 668 aa9.41□□□□□ -0.9
CFAP54-207ENST00000554821 TSHZ2Q9NRE2 1034 aa9.4□□□□□ -0.9
CFAP54-207ENST00000554821 KCNC4Q03721 635 aa9.39□□□□□ -0.91
CFAP54-207ENST00000554821 NYAP1Q6ZVC0 841 aa9.39□□□□□ -0.91
CFAP54-207ENST00000554821 P3H3Q8IVL6 736 aa9.39□□□□□ -0.91
CFAP54-207ENST00000554821 NBPF3Q9H094 633 aa9.39□□□□□ -0.91
CFAP54-207ENST00000554821 ZBED2Q9BTP6 218 aa9.37□□□□□ -0.91
CFAP54-207ENST00000554821 PCDHGA10Q9Y5H3 936 aa9.36□□□□□ -0.91
CFAP54-207ENST00000554821 PPP1R3GB7ZBB8 358 aa9.34□□□□□ -0.91
CFAP54-207ENST00000554821 ARHGEF1Q92888 912 aaKnown RBP9.34□□□□□ -0.91
CFAP54-207ENST00000554821 ADAM33Q9BZ11 813 aa9.34□□□□□ -0.91
CFAP54-207ENST00000554821 ANKK1Q8NFD2 765 aa9.33□□□□□ -0.92
CFAP54-207ENST00000554821 EN1Q05925 392 aaPredicted RBP9.29□□□□□ -0.92
CFAP54-207ENST00000554821 NBR1Q14596 966 aa9.29□□□□□ -0.92
CFAP54-207ENST00000554821 DDX12PQ92771 950 aa9.29□□□□□ -0.92
CFAP54-207ENST00000554821 ONECUT3O60422 494 aaPredicted RBP9.28□□□□□ -0.92
CFAP54-207ENST00000554821 CERKQ8TCT0 537 aa9.28□□□□□ -0.92
CFAP54-207ENST00000554821 C6orf132Q5T0Z8 1188 aa9.27□□□□□ -0.93
CFAP54-207ENST00000554821 PRKD2Q9BZL6 878 aa9.27□□□□□ -0.93
CFAP54-207ENST00000554821 MAP3K7O43318 606 aa9.26□□□□□ -0.93
CFAP54-207ENST00000554821 KCNV2Q8TDN2 545 aa9.26□□□□□ -0.93
CFAP54-207ENST00000554821 SOWAHBA6NEL2 793 aa9.25□□□□□ -0.93
CFAP54-207ENST00000554821 HAP1P54257 671 aaPredicted RBP9.25□□□□□ -0.93
CFAP54-207ENST00000554821 V9GY48 417 aaPredicted RBP9.25□□□□□ -0.93
CFAP54-207ENST00000554821 RABGEF1Q9UJ41 708 aa9.24□□□□□ -0.93
CFAP54-207ENST00000554821 BCAMP50895 628 aa9.23□□□□□ -0.93
CFAP54-207ENST00000554821 GRXCR2A6NFK2 248 aa9.22□□□□□ -0.93
CFAP54-207ENST00000554821 RBM33Q96EV2 1170 aaKnown RBP9.22□□□□□ -0.93
CFAP54-207ENST00000554821 LAPTM4BQ86VI4 370 aa9.21□□□□□ -0.94
CFAP54-207ENST00000554821 COL9A1P20849 921 aa9.2□□□□□ -0.94
CFAP54-207ENST00000554821 LCE2AQ5TA79 106 aaPredicted RBP9.2□□□□□ -0.94
CFAP54-207ENST00000554821 TREML4Q6UXN2 200 aa9.2□□□□□ -0.94
CFAP54-207ENST00000554821 RBM27Q9P2N5 1060 aaKnown RBP9.2□□□□□ -0.94
CFAP54-207ENST00000554821 TRIM6-TRIM34B2RNG4 842 aa9.19□□□□□ -0.94
CFAP54-207ENST00000554821 WBP1LQ9NX94 342 aa9.19□□□□□ -0.94
CFAP54-207ENST00000554821 PDZRN3Q9UPQ7 1066 aa9.19□□□□□ -0.94
CFAP54-207ENST00000554821 OSBPP22059 807 aa9.18□□□□□ -0.94
CFAP54-207ENST00000554821 VSIG10Q8N0Z9 540 aa9.18□□□□□ -0.94
CFAP54-207ENST00000554821 STK17AQ9UEE5 414 aa9.18□□□□□ -0.94
CFAP54-207ENST00000554821 PACS2Q86VP3 889 aa9.17□□□□□ -0.94
CFAP54-207ENST00000554821 PROX2Q3B8N5 592 aa9.16□□□□□ -0.94
CFAP54-207ENST00000554821 SMYD5Q6GMV2 418 aa9.16□□□□□ -0.94
CFAP54-207ENST00000554821 TSR1Q2NL82 804 aaKnown RBP9.15□□□□□ -0.94
CFAP54-207ENST00000554821 KIAA1468Q9P260 1216 aa9.15□□□□□ -0.94
CFAP54-207ENST00000554821 PRSS12P56730 875 aa9.14□□□□□ -0.95
CFAP54-207ENST00000554821 NBPF26B4DH59 902 aa9.13□□□□□ -0.95
CFAP54-207ENST00000554821 FAM98CQ17RN3 349 aaKnown RBP9.13□□□□□ -0.95
CFAP54-207ENST00000554821 CDCA7LQ96GN5 454 aa9.13□□□□□ -0.95
CFAP54-207ENST00000554821 ZFRQ96KR1 1074 aaKnown RBP9.12□□□□□ -0.95
CFAP54-207ENST00000554821 MLLT3P42568 568 aaPredicted RBP9.09□□□□□ -0.95
CFAP54-207ENST00000554821 PRIM1P49642 420 aaKnown RBP9.09□□□□□ -0.95
CFAP54-207ENST00000554821 TSR3Q9UJK0 312 aaKnown RBP9.08□□□□□ -0.96
CFAP54-207ENST00000554821 TSKSQ9UJT2 592 aa9.08□□□□□ -0.96
CFAP54-207ENST00000554821 TESPA1A2RU30 521 aaPredicted RBP9.07□□□□□ -0.96
CFAP54-207ENST00000554821 TULP1O00294 542 aaPredicted RBP9.07□□□□□ -0.96
CFAP54-207ENST00000554821 CDHR5Q9HBB8 845 aa9.07□□□□□ -0.96
CFAP54-207ENST00000554821 POTECB2RU33 542 aa9.06□□□□□ -0.96
CFAP54-207ENST00000554821 SEMA3EO15041 775 aa9.06□□□□□ -0.96
CFAP54-207ENST00000554821 PPP1R18Q6NYC8 613 aa9.06□□□□□ -0.96
CFAP54-207ENST00000554821 NECTIN2Q92692 538 aa9.06□□□□□ -0.96
CFAP54-207ENST00000554821 LRCH3Q96II8 777 aa9.06□□□□□ -0.96
CFAP54-207ENST00000554821 SEPT9Q9UHD8 586 aaPredicted RBP9.06□□□□□ -0.96
CFAP54-207ENST00000554821 KDM2AQ9Y2K7 1162 aa9.06□□□□□ -0.96
CFAP54-207ENST00000554821 TTC13Q8NBP0 860 aa9.05□□□□□ -0.96
CFAP54-207ENST00000554821 FCHSD2O94868 740 aa9.04□□□□□ -0.96
CFAP54-207ENST00000554821 SLC4A3P48751 1232 aa9.04□□□□□ -0.96
CFAP54-207ENST00000554821 HDGFP51858 240 aaKnown RBP9.04□□□□□ -0.96
CFAP54-207ENST00000554821 MYT1Q01538 1121 aa9.04□□□□□ -0.96
CFAP54-207ENST00000554821 TATDN2Q93075 761 aa9.04□□□□□ -0.96
CFAP54-207ENST00000554821 NPDC1Q9NQX5 325 aaPredicted RBP9.04□□□□□ -0.96
CFAP54-207ENST00000554821 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.04□□□□□ -0.96
CFAP54-207ENST00000554821 NUTM2FA1L443 756 aa9.03□□□□□ -0.96
CFAP54-207ENST00000554821 PTGDRQ13258 359 aa9.03□□□□□ -0.96
CFAP54-207ENST00000554821 TJAP1Q5JTD0 557 aa9.03□□□□□ -0.96
CFAP54-207ENST00000554821 PNMA3Q9UL41 463 aa9.03□□□□□ -0.96
CFAP54-207ENST00000554821 HPS5Q9UPZ3 1129 aa9.03□□□□□ -0.96
CFAP54-207ENST00000554821 DGAT1O75907 488 aa9.02□□□□□ -0.97
CFAP54-207ENST00000554821 PADI6Q6TGC4 694 aa9.02□□□□□ -0.97
CFAP54-207ENST00000554821 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms