RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 RANGAP1P46060 587 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-230ENST00000554673 PPARGC1BQ86YN6 1023 aaKnown RBP9.4□□□□□ -0.9
ATXN3-230ENST00000554673 EFCAB5A4FU69 1503 aa9.4□□□□□ -0.91
ATXN3-230ENST00000554673 ZNF710Q8N1W2 664 aa9.39□□□□□ -0.91
ATXN3-230ENST00000554673 BOLA1Q9Y3E2 137 aa9.39□□□□□ -0.91
ATXN3-230ENST00000554673 TPRNQ4KMQ1 711 aa9.37□□□□□ -0.91
ATXN3-230ENST00000554673 HOXB3P14651 431 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-230ENST00000554673 TIAM1Q13009 1591 aa9.36□□□□□ -0.91
ATXN3-230ENST00000554673 PKD2Q13563 968 aa9.35□□□□□ -0.91
ATXN3-230ENST00000554673 KANK4Q5T7N3 995 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-230ENST00000554673 P3H3Q8IVL6 736 aa9.35□□□□□ -0.91
ATXN3-230ENST00000554673 ERBB3P21860 1342 aa9.34□□□□□ -0.91
ATXN3-230ENST00000554673 ILDR1Q86SU0 546 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-230ENST00000554673 KDM2AQ9Y2K7 1162 aa9.34□□□□□ -0.91
ATXN3-230ENST00000554673 IFNLR1Q8IU57 520 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-230ENST00000554673 SPOCK2Q92563 424 aa9.33□□□□□ -0.92
ATXN3-230ENST00000554673 ABCA8O94911 1581 aa9.33□□□□□ -0.92
ATXN3-230ENST00000554673 CDK13Q14004 1512 aaKnown RBP9.32□□□□□ -0.92
ATXN3-230ENST00000554673 CASKIN1Q8WXD9 1431 aa9.31□□□□□ -0.92
ATXN3-230ENST00000554673 HOXB1P14653 301 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-230ENST00000554673 DOK7Q18PE1 504 aa9.31□□□□□ -0.92
ATXN3-230ENST00000554673 NUP153P49790 1475 aaKnown RBP9.31□□□□□ -0.92
ATXN3-230ENST00000554673 FYCO1Q9BQS8 1478 aa9.3□□□□□ -0.92
ATXN3-230ENST00000554673 RAPGEF6Q8TEU7 1601 aa9.3□□□□□ -0.92
ATXN3-230ENST00000554673 PLB1Q6P1J6 1458 aa9.29□□□□□ -0.92
ATXN3-230ENST00000554673 MAP3K1Q13233 1512 aa9.29□□□□□ -0.92
ATXN3-230ENST00000554673 CHMP7Q8WUX9 453 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-230ENST00000554673 ARHGEF11O15085 1522 aa9.27□□□□□ -0.93
ATXN3-230ENST00000554673 VARS2Q5ST30 1063 aaKnown RBP9.27□□□□□ -0.93
ATXN3-230ENST00000554673 EFCAB3Q8N7B9 438 aa9.27□□□□□ -0.93
ATXN3-230ENST00000554673 PRG4Q92954 1404 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-230ENST00000554673 RIMBP2O15034 1052 aa9.26□□□□□ -0.93
ATXN3-230ENST00000554673 RNF166Q96A37 237 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-230ENST00000554673 LRRC9Q6ZRR7 1453 aa9.26□□□□□ -0.93
ATXN3-230ENST00000554673 TTBK1Q5TCY1 1321 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-230ENST00000554673 KIF14Q15058 1648 aa9.25□□□□□ -0.93
ATXN3-230ENST00000554673 HECW1Q76N89 1606 aa9.25□□□□□ -0.93
ATXN3-230ENST00000554673 BBXQ8WY36 941 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-230ENST00000554673 JPH4Q96JJ6 628 aa9.25□□□□□ -0.93
ATXN3-230ENST00000554673 EPRSP07814 1512 aaKnown RBP9.25□□□□□ -0.93
ATXN3-230ENST00000554673 ADCY10Q96PN6 1610 aa9.23□□□□□ -0.93
ATXN3-230ENST00000554673 PHLDB1Q86UU1 1377 aa9.23□□□□□ -0.93
ATXN3-230ENST00000554673 MYT1LQ9UL68 1186 aa9.21□□□□□ -0.94
ATXN3-230ENST00000554673 FMN1Q68DA7 1419 aa9.21□□□□□ -0.94
ATXN3-230ENST00000554673 ABCC2Q92887 1545 aa9.21□□□□□ -0.94
ATXN3-230ENST00000554673 MICALL2Q8IY33 904 aa9.2□□□□□ -0.94
ATXN3-230ENST00000554673 PCGF6Q9BYE7 350 aa9.2□□□□□ -0.94
ATXN3-230ENST00000554673 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-230ENST00000554673 ATP10BO94823 1461 aa9.2□□□□□ -0.94
ATXN3-230ENST00000554673 TMEM92Q6UXU6 159 aa9.19□□□□□ -0.94
ATXN3-230ENST00000554673 RRBP1Q9P2E9 1410 aaKnown RBP9.19□□□□□ -0.94
ATXN3-230ENST00000554673 ZCCHC11Q5TAX3 1644 aaKnown RBP9.19□□□□□ -0.94
ATXN3-230ENST00000554673 CDC42BPAQ5VT25 1732 aa9.19□□□□□ -0.94
ATXN3-230ENST00000554673 EHBP1L1Q8N3D4 1523 aa9.17□□□□□ -0.94
ATXN3-230ENST00000554673 RIMBP3CA6NJZ7 1639 aa9.16□□□□□ -0.94
ATXN3-230ENST00000554673 RIMBP3BA6NNM3 1639 aa9.16□□□□□ -0.94
ATXN3-230ENST00000554673 RIMBP3Q9UFD9 1639 aa9.16□□□□□ -0.94
ATXN3-230ENST00000554673 NCOA2Q15596 1464 aa9.16□□□□□ -0.94
ATXN3-230ENST00000554673 ABCC10Q5T3U5 1492 aa9.16□□□□□ -0.94
ATXN3-230ENST00000554673 ARID3CA6NKF2 412 aa9.16□□□□□ -0.94
ATXN3-230ENST00000554673 PAXIP1Q6ZW49 1069 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-230ENST00000554673 SUPT6HQ7KZ85 1726 aaKnown RBP9.16□□□□□ -0.94
ATXN3-230ENST00000554673 CDC42BPBQ9Y5S2 1711 aa9.16□□□□□ -0.94
ATXN3-230ENST00000554673 PTPRKQ15262 1439 aa9.15□□□□□ -0.94
ATXN3-230ENST00000554673 TRIM26Q12899 539 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-230ENST00000554673 ZNF687Q8N1G0 1237 aa9.15□□□□□ -0.94
ATXN3-230ENST00000554673 TTC37Q6PGP7 1564 aa9.15□□□□□ -0.95
ATXN3-230ENST00000554673 ANKRD13DQ6ZTN6 518 aa9.14□□□□□ -0.95
ATXN3-230ENST00000554673 ZSWIM6Q9HCJ5 1215 aa9.14□□□□□ -0.95
ATXN3-230ENST00000554673 TIMELESSQ9UNS1 1208 aa9.14□□□□□ -0.95
ATXN3-230ENST00000554673 CCDC18Q5T9S5 1454 aa9.14□□□□□ -0.95
ATXN3-230ENST00000554673 GPR153Q6NV75 609 aa9.13□□□□□ -0.95
ATXN3-230ENST00000554673 KDM5BQ9UGL1 1544 aa9.13□□□□□ -0.95
ATXN3-230ENST00000554673 UHRF1BP1LA0JNW5 1464 aa9.13□□□□□ -0.95
ATXN3-230ENST00000554673 PTPRGP23470 1445 aa9.13□□□□□ -0.95
ATXN3-230ENST00000554673 ARSIQ5FYB1 569 aa9.12□□□□□ -0.95
ATXN3-230ENST00000554673 PHF8Q9UPP1 1060 aa9.12□□□□□ -0.95
ATXN3-230ENST00000554673 CARMIL2Q6F5E8 1435 aa9.12□□□□□ -0.95
ATXN3-230ENST00000554673 UACAQ9BZF9 1416 aa9.12□□□□□ -0.95
ATXN3-230ENST00000554673 KDM6BO15054 1643 aa9.12□□□□□ -0.95
ATXN3-230ENST00000554673 MS4A4AQ96JQ5 239 aa9.11□□□□□ -0.95
ATXN3-230ENST00000554673 CFAP44Q96MT7 982 aa9.11□□□□□ -0.95
ATXN3-230ENST00000554673 PTPN23Q9H3S7 1636 aa9.11□□□□□ -0.95
ATXN3-230ENST00000554673 TCOF1Q13428 1488 aaKnown RBP9.1□□□□□ -0.95
ATXN3-230ENST00000554673 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-230ENST00000554673 SOX12O15370 315 aa9.1□□□□□ -0.95
ATXN3-230ENST00000554673 KHSRPQ92945 711 aaKnown RBP eCLIP9.1□□□□□ -0.95
ATXN3-230ENST00000554673 ZFP91Q96JP5 570 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-230ENST00000554673 TROQ12816 1431 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-230ENST00000554673 FGD6Q6ZV73 1430 aa9.09□□□□□ -0.95
ATXN3-230ENST00000554673 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.09□□□□□ -0.95
ATXN3-230ENST00000554673 CROCC2H7BZ55 1655 aa9.08□□□□□ -0.96
ATXN3-230ENST00000554673 RIOK3O14730 519 aaKnown RBP9.08□□□□□ -0.96
ATXN3-230ENST00000554673 DNAJC5Q9H3Z4 198 aa9.08□□□□□ -0.96
ATXN3-230ENST00000554673 TSHZ2Q9NRE2 1034 aa9.08□□□□□ -0.96
ATXN3-230ENST00000554673 GPATCH8Q9UKJ3 1502 aaKnown RBP9.08□□□□□ -0.96
ATXN3-230ENST00000554673 PREX2Q70Z35 1606 aa9.08□□□□□ -0.96
ATXN3-230ENST00000554673 SAMD9LQ8IVG5 1584 aa9.07□□□□□ -0.96
ATXN3-230ENST00000554673 MYOM3Q5VTT5 1437 aa9.07□□□□□ -0.96
ATXN3-230ENST00000554673 ECM2O94769 699 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms