RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 KIAA2012Q0VF49 1180 aa4.2□□□□□ -1.74
SYNE2-212ENST00000554584 CEP89Q96ST8 783 aa4.2□□□□□ -1.74
SYNE2-212ENST00000554584 TTLL5Q6EMB2 1281 aa4.2□□□□□ -1.74
SYNE2-212ENST00000554584 EIF2S2P20042 333 aaKnown RBP4.2□□□□□ -1.74
SYNE2-212ENST00000554584 ZFYVE27Q5T4F4 411 aa4.2□□□□□ -1.74
SYNE2-212ENST00000554584 BCL2L13Q9BXK5 485 aa4.2□□□□□ -1.74
SYNE2-212ENST00000554584 TRIM34Q9BYJ4 488 aa4.2□□□□□ -1.74
SYNE2-212ENST00000554584 EVA1CP58658 441 aa4.19□□□□□ -1.74
SYNE2-212ENST00000554584 MAPK8IP2Q13387 824 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-212ENST00000554584 MYCP01106 439 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-212ENST00000554584 ERCC6Q03468 1493 aa4.19□□□□□ -1.74
SYNE2-212ENST00000554584 FAM170AA1A519 330 aa4.19□□□□□ -1.74
SYNE2-212ENST00000554584 PCMTD1Q96MG8 357 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-212ENST00000554584 TRIM6-TRIM34B2RNG4 842 aa4.18□□□□□ -1.74
SYNE2-212ENST00000554584 ATP2B1P20020 1258 aa4.18□□□□□ -1.74
SYNE2-212ENST00000554584 MINK1Q8N4C8 1332 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-212ENST00000554584 ATP2B2Q01814 1243 aa4.18□□□□□ -1.74
SYNE2-212ENST00000554584 DNAJC2Q99543 621 aaKnown RBP4.18□□□□□ -1.74
SYNE2-212ENST00000554584 SLKQ9H2G2 1235 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-212ENST00000554584 AIMP1Q12904 312 aaKnown RBP4.18□□□□□ -1.74
SYNE2-212ENST00000554584 NGDNQ8NEJ9 315 aaKnown RBP4.18□□□□□ -1.74
SYNE2-212ENST00000554584 PRKCSHP14314 528 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-212ENST00000554584 SUPT16HQ9Y5B9 1047 aaKnown RBP4.17□□□□□ -1.74
SYNE2-212ENST00000554584 PUS7Q96PZ0 661 aaKnown RBP4.17□□□□□ -1.74
SYNE2-212ENST00000554584 RBM42Q9BTD8 480 aaKnown RBP4.17□□□□□ -1.74
SYNE2-212ENST00000554584 CCAR1Q8IX12 1150 aaKnown RBP4.17□□□□□ -1.74
SYNE2-212ENST00000554584 BECN1Q14457 450 aa4.17□□□□□ -1.74
SYNE2-212ENST00000554584 CBX1P83916 185 aa4.17□□□□□ -1.74
SYNE2-212ENST00000554584 PHF14O94880 888 aa4.16□□□□□ -1.74
SYNE2-212ENST00000554584 LMOD3Q0VAK6 560 aa4.16□□□□□ -1.74
SYNE2-212ENST00000554584 TSPY4P0CV99 314 aa4.16□□□□□ -1.74
SYNE2-212ENST00000554584 TSPY10P0CW01 314 aa4.16□□□□□ -1.74
SYNE2-212ENST00000554584 PPP1R12AO14974 1030 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-212ENST00000554584 IKQ13123 557 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-212ENST00000554584 CCDC43Q96MW1 224 aaKnown RBP4.16□□□□□ -1.74
SYNE2-212ENST00000554584 DDRGK1Q96HY6 314 aa4.15□□□□□ -1.74
SYNE2-212ENST00000554584 GOLGA6L6A8MZA4 724 aa4.15□□□□□ -1.75
SYNE2-212ENST00000554584 ADAMTS2O95450 1211 aa4.15□□□□□ -1.75
SYNE2-212ENST00000554584 SERPINA10Q9UK55 444 aa4.15□□□□□ -1.75
SYNE2-212ENST00000554584 EP400NLQ6ZTU2 488 aa4.15□□□□□ -1.75
SYNE2-212ENST00000554584 MCTP1Q6DN14 999 aa4.15□□□□□ -1.75
SYNE2-212ENST00000554584 JARID2Q92833 1246 aaPredicted RBP4.15□□□□□ -1.75
SYNE2-212ENST00000554584 TPD52L1Q16890 204 aaPredicted RBP4.14□□□□□ -1.75
SYNE2-212ENST00000554584 DDX54Q8TDD1 881 aaKnown RBP4.14□□□□□ -1.75
SYNE2-212ENST00000554584 GOLGA6L22H0YM25 854 aa4.14□□□□□ -1.75
SYNE2-212ENST00000554584 TNNT3P45378 269 aaPredicted RBP4.14□□□□□ -1.75
SYNE2-212ENST00000554584 CCDC27Q2M243 656 aa4.14□□□□□ -1.75
SYNE2-212ENST00000554584 CAPN15O75808 1086 aa4.14□□□□□ -1.75
SYNE2-212ENST00000554584 DCAF11Q8TEB1 546 aa4.14□□□□□ -1.75
SYNE2-212ENST00000554584 CASC1Q6TDU7 716 aa4.14□□□□□ -1.75
SYNE2-212ENST00000554584 MORC1Q86VD1 984 aa4.14□□□□□ -1.75
SYNE2-212ENST00000554584 NAP1L1P55209 391 aaKnown RBP4.14□□□□□ -1.75
SYNE2-212ENST00000554584 CHAF1AQ13111 956 aaPredicted RBP4.14□□□□□ -1.75
SYNE2-212ENST00000554584 ZNF592Q92610 1267 aa4.14□□□□□ -1.75
SYNE2-212ENST00000554584 ANKRD62A6NC57 917 aa4.14□□□□□ -1.75
SYNE2-212ENST00000554584 RBM19Q9Y4C8 960 aaKnown RBP4.14□□□□□ -1.75
SYNE2-212ENST00000554584 TTLL12Q14166 644 aaPredicted RBP4.14□□□□□ -1.75
SYNE2-212ENST00000554584 CFAP53Q96M91 514 aa4.13□□□□□ -1.75
SYNE2-212ENST00000554584 ZNF526Q8TF50 670 aaPredicted RBP4.13□□□□□ -1.75
SYNE2-212ENST00000554584 CT47A1Q5JQC4 288 aaPredicted RBP4.13□□□□□ -1.75
SYNE2-212ENST00000554584 MAP4K4O95819 1239 aaPredicted RBP4.13□□□□□ -1.75
SYNE2-212ENST00000554584 MFAP1P55081 439 aaKnown RBP4.13□□□□□ -1.75
SYNE2-212ENST00000554584 CARD11Q9BXL7 1154 aa4.13□□□□□ -1.75
SYNE2-212ENST00000554584 RBM25P49756 843 aaKnown RBP4.13□□□□□ -1.75
SYNE2-212ENST00000554584 TRAK1Q9UPV9 953 aa4.13□□□□□ -1.75
SYNE2-212ENST00000554584 LIG1P18858 919 aa4.13□□□□□ -1.75
SYNE2-212ENST00000554584 CCDC180Q9P1Z9 1646 aa4.13□□□□□ -1.75
SYNE2-212ENST00000554584 RTF1Q92541 710 aaKnown RBP4.13□□□□□ -1.75
SYNE2-212ENST00000554584 ITPRIPQ8IWB1 547 aa4.12□□□□□ -1.75
SYNE2-212ENST00000554584 KIAA1211Q6ZU35 1233 aa4.12□□□□□ -1.75
SYNE2-212ENST00000554584 ZHX3Q9H4I2 956 aa4.12□□□□□ -1.75
SYNE2-212ENST00000554584 TMCO4Q5TGY1 634 aa4.12□□□□□ -1.75
SYNE2-212ENST00000554584 UIMC1Q96RL1 719 aa4.12□□□□□ -1.75
SYNE2-212ENST00000554584 PPP4R2Q9NY27 417 aa4.12□□□□□ -1.75
SYNE2-212ENST00000554584 NLRP2Q9NX02 1062 aa4.12□□□□□ -1.75
SYNE2-212ENST00000554584 U2AF1L5P0DN76 240 aaPredicted RBP4.12□□□□□ -1.75
SYNE2-212ENST00000554584 U2AF1Q01081 240 aaKnown RBP eCLIP4.12□□□□□ -1.75
SYNE2-212ENST00000554584 MTUS2Q5JR59 1369 aa4.12□□□□□ -1.75
SYNE2-212ENST00000554584 ZCCHC6Q5VYS8 1495 aaKnown RBP4.12□□□□□ -1.75
SYNE2-212ENST00000554584 SF3A1Q15459 793 aaKnown RBP4.12□□□□□ -1.75
SYNE2-212ENST00000554584 HOMER1Q86YM7 354 aa4.12□□□□□ -1.75
SYNE2-212ENST00000554584 TIMELESSQ9UNS1 1208 aa4.12□□□□□ -1.75
SYNE2-212ENST00000554584 PLEKHD1A6NEE1 506 aa4.11□□□□□ -1.75
SYNE2-212ENST00000554584 RBM5P52756 815 aaKnown RBP eCLIP4.11□□□□□ -1.75
SYNE2-212ENST00000554584 NOP58Q9Y2X3 529 aaKnown RBP4.11□□□□□ -1.75
SYNE2-212ENST00000554584 MYO9BQ13459 2157 aa4.11□□□□□ -1.75
SYNE2-212ENST00000554584 KNSTRNQ9Y448 316 aa4.11□□□□□ -1.75
SYNE2-212ENST00000554584 RRP12Q5JTH9 1297 aaKnown RBP4.11□□□□□ -1.75
SYNE2-212ENST00000554584 TPM3P06753 285 aa4.11□□□□□ -1.75
SYNE2-212ENST00000554584 GOLGA4Q13439 2230 aaKnown RBP4.11□□□□□ -1.75
SYNE2-212ENST00000554584 RILPL2Q969X0 211 aa4.11□□□□□ -1.75
SYNE2-212ENST00000554584 HNRNPMP52272 730 aaKnown RBP eCLIP4.11□□□□□ -1.75
SYNE2-212ENST00000554584 HMOX1P09601 288 aa4.11□□□□□ -1.75
SYNE2-212ENST00000554584 AMPHP49418 695 aa4.11□□□□□ -1.75
SYNE2-212ENST00000554584 MATR3P43243 847 aaKnown RBP eCLIP4.1□□□□□ -1.75
SYNE2-212ENST00000554584 PPFIA3O75145 1194 aa4.1□□□□□ -1.75
SYNE2-212ENST00000554584 PKD2Q13563 968 aa4.1□□□□□ -1.75
SYNE2-212ENST00000554584 CALRP27797 417 aaKnown RBP4.1□□□□□ -1.75
SYNE2-212ENST00000554584 CLEC11AQ9Y240 323 aa4.1□□□□□ -1.75
SYNE2-212ENST00000554584 CFDP1Q9UEE9 299 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms