RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 TK2O00142 265 aa11.46□□□□□ -0.57
ATXN3-226ENST00000554350 FOSBP53539 338 aa11.46□□□□□ -0.57
ATXN3-226ENST00000554350 SMARCA4P51532 1647 aa11.46□□□□□ -0.58
ATXN3-226ENST00000554350 EVI5O60447 810 aa11.44□□□□□ -0.58
ATXN3-226ENST00000554350 ZNF454Q8N9F8 522 aa11.44□□□□□ -0.58
ATXN3-226ENST00000554350 KCNK17Q96T54 332 aa11.44□□□□□ -0.58
ATXN3-226ENST00000554350 BBXQ8WY36 941 aaPredicted RBP11.42□□□□□ -0.58
ATXN3-226ENST00000554350 BCL2L12Q9HB09 334 aa11.42□□□□□ -0.58
ATXN3-226ENST00000554350 JPH4Q96JJ6 628 aa11.4□□□□□ -0.58
ATXN3-226ENST00000554350 CADPSQ9ULU8 1353 aa11.4□□□□□ -0.59
ATXN3-226ENST00000554350 RTN4Q9NQC3 1192 aaKnown RBP11.39□□□□□ -0.59
ATXN3-226ENST00000554350 CEP164Q9UPV0 1460 aa11.38□□□□□ -0.59
ATXN3-226ENST00000554350 CAMK2BQ13554 666 aa11.38□□□□□ -0.59
ATXN3-226ENST00000554350 VPS9D1Q9Y2B5 631 aa11.38□□□□□ -0.59
ATXN3-226ENST00000554350 MAP3K9P80192 1104 aa11.37□□□□□ -0.59
ATXN3-226ENST00000554350 ADAM33Q9BZ11 813 aa11.37□□□□□ -0.59
ATXN3-226ENST00000554350 AMER1Q5JTC6 1135 aaPredicted RBP11.36□□□□□ -0.59
ATXN3-226ENST00000554350 ARAP1Q96P48 1450 aa11.34□□□□□ -0.59
ATXN3-226ENST00000554350 ZDHHC16Q969W1 377 aa11.34□□□□□ -0.59
ATXN3-226ENST00000554350 SLC4A5Q9BY07 1137 aa11.34□□□□□ -0.59
ATXN3-226ENST00000554350 PCDHGA10Q9Y5H3 936 aa11.33□□□□□ -0.6
ATXN3-226ENST00000554350 PTPREP23469 700 aa11.32□□□□□ -0.6
ATXN3-226ENST00000554350 ZBED2Q9BTP6 218 aa11.32□□□□□ -0.6
ATXN3-226ENST00000554350 BHMG1C9JSJ3 638 aaPredicted RBP11.31□□□□□ -0.6
ATXN3-226ENST00000554350 KCNH8Q96L42 1107 aa11.3□□□□□ -0.6
ATXN3-226ENST00000554350 HCSTQ9UBK5 93 aa11.3□□□□□ -0.6
ATXN3-226ENST00000554350 FANCD2Q9BXW9 1451 aa11.29□□□□□ -0.6
ATXN3-226ENST00000554350 DPYSL4O14531 572 aa11.28□□□□□ -0.6
ATXN3-226ENST00000554350 SPRYD3Q8NCJ5 442 aa11.27□□□□□ -0.61
ATXN3-226ENST00000554350 KCTD12Q96CX2 325 aaKnown RBP11.27□□□□□ -0.61
ATXN3-226ENST00000554350 PEG3Q9GZU2 1588 aa11.27□□□□□ -0.61
ATXN3-226ENST00000554350 PHF14O94880 888 aa11.25□□□□□ -0.61
ATXN3-226ENST00000554350 COL9A1P20849 921 aa11.25□□□□□ -0.61
ATXN3-226ENST00000554350 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
ATXN3-226ENST00000554350 PPP1R3GB7ZBB8 358 aa11.22□□□□□ -0.61
ATXN3-226ENST00000554350 URB2Q14146 1524 aaKnown RBP11.22□□□□□ -0.61
ATXN3-226ENST00000554350 ZNF608Q9ULD9 1512 aaPredicted RBP11.22□□□□□ -0.61
ATXN3-226ENST00000554350 FBXW7Q969H0 707 aa11.21□□□□□ -0.61
ATXN3-226ENST00000554350 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
ATXN3-226ENST00000554350 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.21□□□□□ -0.61
ATXN3-226ENST00000554350 PROX2Q3B8N5 592 aa11.2□□□□□ -0.62
ATXN3-226ENST00000554350 STAC3Q96MF2 364 aa11.2□□□□□ -0.62
ATXN3-226ENST00000554350 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
ATXN3-226ENST00000554350 RSF1Q96T23 1441 aaPredicted RBP11.18□□□□□ -0.62
ATXN3-226ENST00000554350 MROH2BQ7Z745 1585 aa11.17□□□□□ -0.62
ATXN3-226ENST00000554350 PDIA6Q15084 440 aa11.17□□□□□ -0.62
ATXN3-226ENST00000554350 THSD4Q6ZMP0 1018 aa11.17□□□□□ -0.62
ATXN3-226ENST00000554350 EPAS1Q99814 870 aa11.17□□□□□ -0.62
ATXN3-226ENST00000554350 CHD1O14646 1710 aa11.17□□□□□ -0.62
ATXN3-226ENST00000554350 DDX12PQ92771 950 aa11.16□□□□□ -0.62
ATXN3-226ENST00000554350 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
ATXN3-226ENST00000554350 IFT140Q96RY7 1462 aa11.15□□□□□ -0.62
ATXN3-226ENST00000554350 C6orf132Q5T0Z8 1188 aa11.15□□□□□ -0.62
ATXN3-226ENST00000554350 MRPL50Q8N5N7 158 aaKnown RBP11.15□□□□□ -0.62
ATXN3-226ENST00000554350 PTPN5P54829 565 aa11.14□□□□□ -0.63
ATXN3-226ENST00000554350 RABGEF1Q9UJ41 708 aa11.14□□□□□ -0.63
ATXN3-226ENST00000554350 NBPF3Q9H094 633 aa11.13□□□□□ -0.63
ATXN3-226ENST00000554350 WNT2BQ93097 391 aa11.12□□□□□ -0.63
ATXN3-226ENST00000554350 ARIH1Q9Y4X5 557 aaPredicted RBP11.12□□□□□ -0.63
ATXN3-226ENST00000554350 E2F4Q16254 413 aa11.11□□□□□ -0.63
ATXN3-226ENST00000554350 RBM33Q96EV2 1170 aaKnown RBP11.11□□□□□ -0.63
ATXN3-226ENST00000554350 EIF4G3O43432 1585 aaKnown RBP11.11□□□□□ -0.63
ATXN3-226ENST00000554350 PRIM1P49642 420 aaKnown RBP11.1□□□□□ -0.63
ATXN3-226ENST00000554350 CFTRP13569 1480 aa11.09□□□□□ -0.63
ATXN3-226ENST00000554350 SPDYE16A6NNV3 312 aaPredicted RBP11.09□□□□□ -0.63
ATXN3-226ENST00000554350 EN1Q05925 392 aaPredicted RBP11.09□□□□□ -0.63
ATXN3-226ENST00000554350 KIAA1468Q9P260 1216 aa11.09□□□□□ -0.63
ATXN3-226ENST00000554350 GOLGA8CPA6NN73 597 aa11.08□□□□□ -0.64
ATXN3-226ENST00000554350 ONECUT3O60422 494 aaPredicted RBP11.07□□□□□ -0.64
ATXN3-226ENST00000554350 NBR1Q14596 966 aa11.07□□□□□ -0.64
ATXN3-226ENST00000554350 TSR1Q2NL82 804 aaKnown RBP11.07□□□□□ -0.64
ATXN3-226ENST00000554350 TRIM6-TRIM34B2RNG4 842 aa11.06□□□□□ -0.64
ATXN3-226ENST00000554350 LAPTM4BQ86VI4 370 aa11.05□□□□□ -0.64
ATXN3-226ENST00000554350 AQRO60306 1485 aaKnown RBP eCLIP11.05□□□□□ -0.64
ATXN3-226ENST00000554350 SEPT9Q9UHD8 586 aaPredicted RBP11.04□□□□□ -0.64
ATXN3-226ENST00000554350 WIZO95785 1651 aa11.02□□□□□ -0.64
ATXN3-226ENST00000554350 MAP3K7O43318 606 aa11.02□□□□□ -0.65
ATXN3-226ENST00000554350 BCAMP50895 628 aa11.02□□□□□ -0.65
ATXN3-226ENST00000554350 IFFO2Q5TF58 517 aa11.02□□□□□ -0.65
ATXN3-226ENST00000554350 ZFRQ96KR1 1074 aaKnown RBP11.02□□□□□ -0.65
ATXN3-226ENST00000554350 TSKSQ9UJT2 592 aa11.02□□□□□ -0.65
ATXN3-226ENST00000554350 ANKK1Q8NFD2 765 aa11.01□□□□□ -0.65
ATXN3-226ENST00000554350 WDR70Q9NW82 654 aa11.01□□□□□ -0.65
ATXN3-226ENST00000554350 SOWAHBA6NEL2 793 aa11□□□□□ -0.65
ATXN3-226ENST00000554350 OSBPP22059 807 aa10.99□□□□□ -0.65
ATXN3-226ENST00000554350 TSHZ2Q9NRE2 1034 aa10.99□□□□□ -0.65
ATXN3-226ENST00000554350 FAM198AQ9UFP1 575 aa10.99□□□□□ -0.65
ATXN3-226ENST00000554350 GRXCR2A6NFK2 248 aa10.98□□□□□ -0.65
ATXN3-226ENST00000554350 GAPVD1Q14C86 1478 aa10.98□□□□□ -0.65
ATXN3-226ENST00000554350 CLASP1Q7Z460 1538 aa10.98□□□□□ -0.65
ATXN3-226ENST00000554350 TOPBP1Q92547 1522 aa10.98□□□□□ -0.65
ATXN3-226ENST00000554350 C3orf80F5H4A9 247 aa10.97□□□□□ -0.65
ATXN3-226ENST00000554350 FAM98CQ17RN3 349 aaKnown RBP10.97□□□□□ -0.65
ATXN3-226ENST00000554350 CHMP7Q8WUX9 453 aaPredicted RBP10.97□□□□□ -0.65
ATXN3-226ENST00000554350 SYNJ1O43426 1573 aa10.96□□□□□ -0.65
ATXN3-226ENST00000554350 CDHR5Q9HBB8 845 aa10.96□□□□□ -0.65
ATXN3-226ENST00000554350 CDCA7LQ96GN5 454 aa10.95□□□□□ -0.66
ATXN3-226ENST00000554350 WBP1LQ9NX94 342 aa10.94□□□□□ -0.66
ATXN3-226ENST00000554350 ITGBL1O95965 494 aaPredicted RBP10.93□□□□□ -0.66
ATXN3-226ENST00000554350 PRSS12P56730 875 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms