RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 NLRP13Q86W25 1043 aa15.1■□□□□ 0.01
PTPN21-205ENST00000554270 CCDC146Q8IYE0 955 aa15.1■□□□□ 0.01
PTPN21-205ENST00000554270 RRP1P56182 461 aaKnown RBP15.09■□□□□ 0.01
PTPN21-205ENST00000554270 DISP1Q96F81 1524 aa15.09■□□□□ 0.01
PTPN21-205ENST00000554270 CCDC144AA2RUR9 1427 aa15.09■□□□□ 0.01
PTPN21-205ENST00000554270 RALBP1Q15311 655 aa15.09■□□□□ 0.01
PTPN21-205ENST00000554270 TMF1P82094 1093 aa15.08■□□□□ 0.01
PTPN21-205ENST00000554270 TARBP1Q13395 1621 aaKnown RBP15.07■□□□□ 0
PTPN21-205ENST00000554270 TEX14Q8IWB6 1497 aa15.07■□□□□ 0
PTPN21-205ENST00000554270 ADAMTS12P58397 1594 aa15.06■□□□□ 0
PTPN21-205ENST00000554270 PZPP20742 1482 aa15.06■□□□□ 0
PTPN21-205ENST00000554270 PDE4AP27815 886 aa15.06■□□□□ 0
PTPN21-205ENST00000554270 CRBNQ96SW2 442 aa15.06■□□□□ 0
PTPN21-205ENST00000554270 DHX29Q7Z478 1369 aaKnown RBP15.05■□□□□ -0
PTPN21-205ENST00000554270 AFAP1Q8N556 730 aa15.04■□□□□ -0
PTPN21-205ENST00000554270 NUTM2DQ5VT03 806 aaPredicted RBP15.02■□□□□ -0
PTPN21-205ENST00000554270 SPATA31E1Q6ZUB1 1445 aa15.02□□□□□ -0.01
PTPN21-205ENST00000554270 ADAMTS8Q9UP79 889 aa15.01□□□□□ -0.01
PTPN21-205ENST00000554270 KIAA0556O60303 1618 aa15.01□□□□□ -0.01
PTPN21-205ENST00000554270 RAPGEF6Q8TEU7 1601 aa15.01□□□□□ -0.01
PTPN21-205ENST00000554270 PBRM1Q86U86 1689 aa15.01□□□□□ -0.01
PTPN21-205ENST00000554270 KIF3BO15066 747 aa15□□□□□ -0.01
PTPN21-205ENST00000554270 SAFB2Q14151 953 aaKnown RBP eCLIP15□□□□□ -0.01
PTPN21-205ENST00000554270 KIF14Q15058 1648 aa15□□□□□ -0.01
PTPN21-205ENST00000554270 SMG6Q86US8 1419 aaKnown RBP15□□□□□ -0.01
PTPN21-205ENST00000554270 FRAT1Q92837 279 aaPredicted RBP15□□□□□ -0.01
PTPN21-205ENST00000554270 MAGI1Q96QZ7 1491 aaPredicted RBP14.99□□□□□ -0.01
PTPN21-205ENST00000554270 EIF5BO60841 1220 aaKnown RBP14.98□□□□□ -0.01
PTPN21-205ENST00000554270 TCERG1O14776 1098 aaKnown RBP14.98□□□□□ -0.01
PTPN21-205ENST00000554270 EFCAB2Q5VUJ9 269 aa14.98□□□□□ -0.01
PTPN21-205ENST00000554270 ATP10BO94823 1461 aa14.98□□□□□ -0.01
PTPN21-205ENST00000554270 GCC2Q8IWJ2 1684 aa14.97□□□□□ -0.01
PTPN21-205ENST00000554270 C20orf194Q5TEA3 1177 aa14.97□□□□□ -0.01
PTPN21-205ENST00000554270 DNMT1P26358 1616 aaKnown RBP14.96□□□□□ -0.01
PTPN21-205ENST00000554270 SYNJ2O15056 1496 aa14.95□□□□□ -0.02
PTPN21-205ENST00000554270 GGT6Q6P531 493 aa14.95□□□□□ -0.02
PTPN21-205ENST00000554270 IL27Q8NEV9 243 aa14.95□□□□□ -0.02
PTPN21-205ENST00000554270 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.95□□□□□ -0.02
PTPN21-205ENST00000554270 RRP7AQ9Y3A4 280 aaKnown RBP14.95□□□□□ -0.02
PTPN21-205ENST00000554270 SPAG9O60271 1321 aaKnown RBP14.95□□□□□ -0.02
PTPN21-205ENST00000554270 BRD4O60885 1362 aaPredicted RBP14.95□□□□□ -0.02
PTPN21-205ENST00000554270 DISP3Q9P2K9 1392 aa14.94□□□□□ -0.02
PTPN21-205ENST00000554270 APAF1O14727 1248 aa14.93□□□□□ -0.02
PTPN21-205ENST00000554270 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.93□□□□□ -0.02
PTPN21-205ENST00000554270 ARHGAP5Q13017 1502 aa14.93□□□□□ -0.02
PTPN21-205ENST00000554270 ARID4BQ4LE39 1312 aaPredicted RBP14.93□□□□□ -0.02
PTPN21-205ENST00000554270 RSPH4AQ5TD94 716 aa14.92□□□□□ -0.02
PTPN21-205ENST00000554270 EIF4G3O43432 1585 aaKnown RBP14.92□□□□□ -0.02
PTPN21-205ENST00000554270 SPRYD3Q8NCJ5 442 aa14.92□□□□□ -0.02
PTPN21-205ENST00000554270 CFAP70Q5T0N1 1121 aa14.91□□□□□ -0.02
PTPN21-205ENST00000554270 TRAK1Q9UPV9 953 aa14.91□□□□□ -0.02
PTPN21-205ENST00000554270 PLEKHH2Q8IVE3 1493 aa14.91□□□□□ -0.02
PTPN21-205ENST00000554270 BCL2L13Q9BXK5 485 aa14.9□□□□□ -0.02
PTPN21-205ENST00000554270 GOLGA2Q08379 1002 aa14.89□□□□□ -0.03
PTPN21-205ENST00000554270 CLUAP1Q96AJ1 413 aa14.89□□□□□ -0.03
PTPN21-205ENST00000554270 PPM1GO15355 546 aaPredicted RBP14.88□□□□□ -0.03
PTPN21-205ENST00000554270 PPP2R1AP30153 589 aa14.88□□□□□ -0.03
PTPN21-205ENST00000554270 PER1O15534 1290 aaPredicted RBP14.88□□□□□ -0.03
PTPN21-205ENST00000554270 PDE3BQ13370 1112 aa14.88□□□□□ -0.03
PTPN21-205ENST00000554270 DDRGK1Q96HY6 314 aa14.88□□□□□ -0.03
PTPN21-205ENST00000554270 SLKQ9H2G2 1235 aaPredicted RBP14.87□□□□□ -0.03
PTPN21-205ENST00000554270 CEP170Q5SW79 1584 aa14.87□□□□□ -0.03
PTPN21-205ENST00000554270 TESK2Q96S53 571 aa14.87□□□□□ -0.03
PTPN21-205ENST00000554270 BACH2Q9BYV9 841 aa14.87□□□□□ -0.03
PTPN21-205ENST00000554270 BCORL1Q5H9F3 1711 aa14.87□□□□□ -0.03
PTPN21-205ENST00000554270 CDCA8Q53HL2 280 aa14.86□□□□□ -0.03
PTPN21-205ENST00000554270 TMEM132EQ6IEE7 984 aa14.86□□□□□ -0.03
PTPN21-205ENST00000554270 STK26Q9P289 416 aa14.86□□□□□ -0.03
PTPN21-205ENST00000554270 CCDC141Q6ZP82 1450 aa14.85□□□□□ -0.03
PTPN21-205ENST00000554270 RALGAPBQ86X10 1494 aa14.85□□□□□ -0.03
PTPN21-205ENST00000554270 BCAR3O75815 825 aa14.84□□□□□ -0.03
PTPN21-205ENST00000554270 ERBINQ96RT1 1412 aa14.84□□□□□ -0.03
PTPN21-205ENST00000554270 MORC1Q86VD1 984 aa14.83□□□□□ -0.04
PTPN21-205ENST00000554270 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
PTPN21-205ENST00000554270 COG6Q9Y2V7 657 aa14.82□□□□□ -0.04
PTPN21-205ENST00000554270 ANO8Q9HCE9 1232 aaPredicted RBP14.82□□□□□ -0.04
PTPN21-205ENST00000554270 PRAG1Q86YV5 1406 aa14.81□□□□□ -0.04
PTPN21-205ENST00000554270 SYCP2Q9BX26 1530 aa14.81□□□□□ -0.04
PTPN21-205ENST00000554270 U2SURPO15042 1029 aaKnown RBP14.81□□□□□ -0.04
PTPN21-205ENST00000554270 BRPF3Q9ULD4 1205 aa14.8□□□□□ -0.04
PTPN21-205ENST00000554270 FAM135AQ9P2D6 1515 aa14.8□□□□□ -0.04
PTPN21-205ENST00000554270 PANK1Q8TE04 598 aa14.79□□□□□ -0.04
PTPN21-205ENST00000554270 SLC12A5Q9H2X9 1139 aa14.78□□□□□ -0.04
PTPN21-205ENST00000554270 ADGRL2O95490 1459 aa14.78□□□□□ -0.04
PTPN21-205ENST00000554270 NFKBIBQ15653 356 aa14.78□□□□□ -0.04
PTPN21-205ENST00000554270 ITSN2Q9NZM3 1697 aa14.78□□□□□ -0.04
PTPN21-205ENST00000554270 KANK1Q14678 1352 aa14.77□□□□□ -0.04
PTPN21-205ENST00000554270 PARD3Q8TEW0 1356 aa14.77□□□□□ -0.04
PTPN21-205ENST00000554270 LRPPRCP42704 1394 aaKnown RBP14.77□□□□□ -0.05
PTPN21-205ENST00000554270 SPINK5Q9NQ38 1064 aaPredicted RBP14.77□□□□□ -0.05
PTPN21-205ENST00000554270 RNF123Q5XPI4 1314 aa14.77□□□□□ -0.05
PTPN21-205ENST00000554270 KDM5CP41229 1560 aa14.76□□□□□ -0.05
PTPN21-205ENST00000554270 UPF2Q9HAU5 1272 aaKnown RBP14.76□□□□□ -0.05
PTPN21-205ENST00000554270 MBD5Q9P267 1494 aa14.76□□□□□ -0.05
PTPN21-205ENST00000554270 U2AF1L5P0DN76 240 aaPredicted RBP14.76□□□□□ -0.05
PTPN21-205ENST00000554270 U2AF1Q01081 240 aaKnown RBP eCLIP14.76□□□□□ -0.05
PTPN21-205ENST00000554270 NUP160Q12769 1436 aa14.76□□□□□ -0.05
PTPN21-205ENST00000554270 SCAPERQ9BY12 1400 aa14.76□□□□□ -0.05
PTPN21-205ENST00000554270 ADGRF5Q8IZF2 1346 aa14.76□□□□□ -0.05
PTPN21-205ENST00000554270 MS4A1P11836 297 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms