RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 UHRF1BP1LA0JNW5 1464 aa12.38□□□□□ -0.43
AL049839.2-201ENST00000553947 ERICH6BQ5W0A0 696 aa12.38□□□□□ -0.43
AL049839.2-201ENST00000553947 USP47Q96K76 1375 aa12.37□□□□□ -0.43
AL049839.2-201ENST00000553947 PLCH2O75038 1416 aa12.37□□□□□ -0.43
AL049839.2-201ENST00000553947 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
AL049839.2-201ENST00000553947 BCORL1Q5H9F3 1711 aa12.37□□□□□ -0.43
AL049839.2-201ENST00000553947 UHRF1BP1Q6BDS2 1440 aa12.37□□□□□ -0.43
AL049839.2-201ENST00000553947 UBE2Q2Q8WVN8 375 aa12.36□□□□□ -0.43
AL049839.2-201ENST00000553947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.36□□□□□ -0.43
AL049839.2-201ENST00000553947 PLEKHH2Q8IVE3 1493 aa12.36□□□□□ -0.43
AL049839.2-201ENST00000553947 POLR1AO95602 1720 aaPredicted RBP12.36□□□□□ -0.43
AL049839.2-201ENST00000553947 KDM5CP41229 1560 aa12.35□□□□□ -0.43
AL049839.2-201ENST00000553947 PRKRIP1Q9H875 184 aaPredicted RBP12.35□□□□□ -0.43
AL049839.2-201ENST00000553947 UNC13BO14795 1591 aa12.35□□□□□ -0.43
AL049839.2-201ENST00000553947 PLXNC1O60486 1568 aa12.35□□□□□ -0.43
AL049839.2-201ENST00000553947 DCAF11Q8TEB1 546 aa12.34□□□□□ -0.43
AL049839.2-201ENST00000553947 EFCAB2Q5VUJ9 269 aa12.34□□□□□ -0.43
AL049839.2-201ENST00000553947 PLA2R1Q13018 1463 aa12.34□□□□□ -0.43
AL049839.2-201ENST00000553947 RALGAPBQ86X10 1494 aa12.34□□□□□ -0.43
AL049839.2-201ENST00000553947 TRAPPC8Q9Y2L5 1435 aa12.34□□□□□ -0.43
AL049839.2-201ENST00000553947 ABCC1P33527 1531 aa12.32□□□□□ -0.44
AL049839.2-201ENST00000553947 HNRNPUQ00839 825 aaKnown RBP eCLIP12.32□□□□□ -0.447e-7■□□□□ 8.7
AL049839.2-201ENST00000553947 POLR3GLQ9BT43 218 aa12.32□□□□□ -0.44
AL049839.2-201ENST00000553947 CARD11Q9BXL7 1154 aa12.32□□□□□ -0.44
AL049839.2-201ENST00000553947 DUOX2Q9NRD8 1548 aa12.31□□□□□ -0.44
AL049839.2-201ENST00000553947 RTL5Q5HYW3 569 aaPredicted RBP12.31□□□□□ -0.44
AL049839.2-201ENST00000553947 RGL3Q3MIN7 710 aa12.3□□□□□ -0.44
AL049839.2-201ENST00000553947 CCDC144AA2RUR9 1427 aa12.3□□□□□ -0.44
AL049839.2-201ENST00000553947 AFAP1Q8N556 730 aa12.3□□□□□ -0.44
AL049839.2-201ENST00000553947 IQGAP3Q86VI3 1631 aa12.3□□□□□ -0.44
AL049839.2-201ENST00000553947 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
AL049839.2-201ENST00000553947 EIF5BO60841 1220 aaKnown RBP12.29□□□□□ -0.44
AL049839.2-201ENST00000553947 IL27Q8NEV9 243 aa12.29□□□□□ -0.44
AL049839.2-201ENST00000553947 CNGB1Q14028 1251 aaPredicted RBP12.29□□□□□ -0.44
AL049839.2-201ENST00000553947 ST20-MTHFSA0A0A6YYL1 179 aa12.28□□□□□ -0.44
AL049839.2-201ENST00000553947 ERBINQ96RT1 1412 aa12.28□□□□□ -0.44
AL049839.2-201ENST00000553947 MAGI2Q86UL8 1455 aa12.28□□□□□ -0.44
AL049839.2-201ENST00000553947 MRS2Q9HD23 443 aa12.27□□□□□ -0.44
AL049839.2-201ENST00000553947 IRX6P78412 446 aaPredicted RBP12.27□□□□□ -0.45
AL049839.2-201ENST00000553947 FAM9BQ8IZU0 186 aa12.27□□□□□ -0.45
AL049839.2-201ENST00000553947 WDR7Q9Y4E6 1490 aa12.27□□□□□ -0.45
AL049839.2-201ENST00000553947 PRAG1Q86YV5 1406 aa12.26□□□□□ -0.45
AL049839.2-201ENST00000553947 A2MP01023 1474 aa12.26□□□□□ -0.45
AL049839.2-201ENST00000553947 SPAG9O60271 1321 aaKnown RBP12.26□□□□□ -0.45
AL049839.2-201ENST00000553947 ROCK2O75116 1388 aaKnown RBP12.26□□□□□ -0.45
AL049839.2-201ENST00000553947 NBPF1Q3BBV0 1214 aa12.26□□□□□ -0.45
AL049839.2-201ENST00000553947 TRPM1Q7Z4N2 1603 aa12.25□□□□□ -0.45
AL049839.2-201ENST00000553947 NOP58Q9Y2X3 529 aaKnown RBP12.24□□□□□ -0.45
AL049839.2-201ENST00000553947 ZFYVE16Q7Z3T8 1539 aa12.24□□□□□ -0.45
AL049839.2-201ENST00000553947 ARAP3Q8WWN8 1544 aa12.24□□□□□ -0.45
AL049839.2-201ENST00000553947 ARID4BQ4LE39 1312 aaPredicted RBP12.24□□□□□ -0.45
AL049839.2-201ENST00000553947 FANCAO15360 1455 aa12.23□□□□□ -0.45
AL049839.2-201ENST00000553947 ATP10AO60312 1499 aa12.23□□□□□ -0.45
AL049839.2-201ENST00000553947 ABCA9Q8IUA7 1624 aa12.22□□□□□ -0.45
AL049839.2-201ENST00000553947 RTEL1-TNFRSF6BF6WH68 1400 aa12.22□□□□□ -0.45
AL049839.2-201ENST00000553947 ASXL2Q76L83 1435 aa12.21□□□□□ -0.45
AL049839.2-201ENST00000553947 E9PCH4 1651 aa12.2□□□□□ -0.46
AL049839.2-201ENST00000553947 GPRASP1Q5JY77 1395 aa12.19□□□□□ -0.46
AL049839.2-201ENST00000553947 SCAPERQ9BY12 1400 aa12.19□□□□□ -0.46
AL049839.2-201ENST00000553947 ATP7AQ04656 1500 aa12.19□□□□□ -0.46
AL049839.2-201ENST00000553947 ADGRL1O94910 1474 aa12.19□□□□□ -0.46
AL049839.2-201ENST00000553947 INO80Q9ULG1 1556 aaPredicted RBP12.18□□□□□ -0.46
AL049839.2-201ENST00000553947 PAK3O75914 559 aaPredicted RBP12.17□□□□□ -0.46
AL049839.2-201ENST00000553947 OSCARQ8IYS5 282 aa12.17□□□□□ -0.46
AL049839.2-201ENST00000553947 DEPDC5O75140 1603 aa12.17□□□□□ -0.46
AL049839.2-201ENST00000553947 PRDM15P57071 1507 aaPredicted RBP12.16□□□□□ -0.46
AL049839.2-201ENST00000553947 ZBED9Q6R2W3 1325 aa12.16□□□□□ -0.46
AL049839.2-201ENST00000553947 KIF3BO15066 747 aa12.16□□□□□ -0.46
AL049839.2-201ENST00000553947 TESK2Q96S53 571 aa12.16□□□□□ -0.46
AL049839.2-201ENST00000553947 DISP3Q9P2K9 1392 aa12.15□□□□□ -0.47
AL049839.2-201ENST00000553947 LAMC1P11047 1609 aa12.14□□□□□ -0.47
AL049839.2-201ENST00000553947 TRPM2O94759 1503 aa12.14□□□□□ -0.47
AL049839.2-201ENST00000553947 PTPRTO14522 1441 aa12.14□□□□□ -0.47
AL049839.2-201ENST00000553947 SENP3-EIF4A1A0A087X0R7 540 aa12.14□□□□□ -0.47
AL049839.2-201ENST00000553947 PKNOX2Q96KN3 472 aa12.14□□□□□ -0.47
AL049839.2-201ENST00000553947 CLTCL1P53675 1640 aa12.14□□□□□ -0.47
AL049839.2-201ENST00000553947 EIF2AK4Q9P2K8 1649 aaKnown RBP12.13□□□□□ -0.47
AL049839.2-201ENST00000553947 VWDEQ8N2E2 1590 aa12.13□□□□□ -0.47
AL049839.2-201ENST00000553947 SPHKAPQ2M3C7 1700 aa12.13□□□□□ -0.47
AL049839.2-201ENST00000553947 MROH1Q8NDA8 1641 aa12.13□□□□□ -0.47
AL049839.2-201ENST00000553947 TET3O43151 1660 aa12.13□□□□□ -0.47
AL049839.2-201ENST00000553947 COL17A1Q9UMD9 1497 aaPredicted RBP12.13□□□□□ -0.47
AL049839.2-201ENST00000553947 PNISRQ8TF01 805 aaKnown RBP12.12□□□□□ -0.47
AL049839.2-201ENST00000553947 KIDINS220Q9ULH0 1771 aa12.12□□□□□ -0.47
AL049839.2-201ENST00000553947 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
AL049839.2-201ENST00000553947 MADDQ8WXG6 1647 aa12.12□□□□□ -0.47
AL049839.2-201ENST00000553947 RNF17Q9BXT8 1623 aaKnown RBP12.12□□□□□ -0.47
AL049839.2-201ENST00000553947 CEP152O94986 1710 aa12.11□□□□□ -0.47
AL049839.2-201ENST00000553947 PER1O15534 1290 aaPredicted RBP12.11□□□□□ -0.47
AL049839.2-201ENST00000553947 TMC1Q8TDI8 760 aa12.11□□□□□ -0.47
AL049839.2-201ENST00000553947 KANK1Q14678 1352 aa12.1□□□□□ -0.47
AL049839.2-201ENST00000553947 ZBTB47Q9UFB7 747 aaPredicted RBP12.1□□□□□ -0.47
AL049839.2-201ENST00000553947 UGGT1Q9NYU2 1555 aa12.1□□□□□ -0.47
AL049839.2-201ENST00000553947 ANP32AP39687 249 aaKnown RBP12.09□□□□□ -0.47
AL049839.2-201ENST00000553947 MYBBP1AQ9BQG0 1328 aaKnown RBP12.09□□□□□ -0.47
AL049839.2-201ENST00000553947 CD109Q6YHK3 1445 aa12.09□□□□□ -0.47
AL049839.2-201ENST00000553947 RALBP1Q15311 655 aa12.09□□□□□ -0.47
AL049839.2-201ENST00000553947 ZNF518AQ6AHZ1 1483 aa12.08□□□□□ -0.48
AL049839.2-201ENST00000553947 B4GALNT3Q6L9W6 998 aa12.07□□□□□ -0.48
AL049839.2-201ENST00000553947 PANK3Q9H999 370 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms