RNA–Protein interactions for RNA: ENST00000553927.1

RPGRIP1-204, Transcript of RPGR interacting protein 1, humanhuman

TSL 2

Gene RPGRIP1, Length 2,875 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-204ENST00000553927 RRP9O43818 475 aaKnown RBP8.79□□□□□ -1
RPGRIP1-204ENST00000553927 SNAPC4Q5SXM2 1469 aa8.78□□□□□ -1
RPGRIP1-204ENST00000553927 NLRP13Q86W25 1043 aa8.78□□□□□ -1
RPGRIP1-204ENST00000553927 ERBB4Q15303 1308 aa8.77□□□□□ -1
RPGRIP1-204ENST00000553927 MIA2Q96PC5 1412 aa8.77□□□□□ -1
RPGRIP1-204ENST00000553927 PDE3BQ13370 1112 aa8.77□□□□□ -1.01
RPGRIP1-204ENST00000553927 USP19O94966 1318 aa8.77□□□□□ -1.01
RPGRIP1-204ENST00000553927 RALBP1Q15311 655 aa8.77□□□□□ -1.01
RPGRIP1-204ENST00000553927 CLCN1P35523 988 aa8.76□□□□□ -1.01
RPGRIP1-204ENST00000553927 MAGI3Q5TCQ9 1506 aa8.76□□□□□ -1.01
RPGRIP1-204ENST00000553927 IGHDP01880 384 aa8.76□□□□□ -1.01
RPGRIP1-204ENST00000553927 RAD54L2Q9Y4B4 1467 aa8.76□□□□□ -1.01
RPGRIP1-204ENST00000553927 LRRIQ1Q96JM4 1722 aa8.76□□□□□ -1.01
RPGRIP1-204ENST00000553927 PPP4R3CPQ6ZMV5 832 aa8.75□□□□□ -1.01
RPGRIP1-204ENST00000553927 RBM10P98175 930 aaKnown RBP8.75□□□□□ -1.01
RPGRIP1-204ENST00000553927 PKD2Q13563 968 aa8.75□□□□□ -1.01
RPGRIP1-204ENST00000553927 POLR1AO95602 1720 aaPredicted RBP8.75□□□□□ -1.01
RPGRIP1-204ENST00000553927 BECN1Q14457 450 aa8.75□□□□□ -1.01
RPGRIP1-204ENST00000553927 EFCAB5A4FU69 1503 aa8.74□□□□□ -1.01
RPGRIP1-204ENST00000553927 SUPT6HQ7KZ85 1726 aaKnown RBP8.74□□□□□ -1.01
RPGRIP1-204ENST00000553927 BCAR3O75815 825 aa8.74□□□□□ -1.01
RPGRIP1-204ENST00000553927 ADAMTS8Q9UP79 889 aa8.74□□□□□ -1.01
RPGRIP1-204ENST00000553927 GCC2Q8IWJ2 1684 aa8.74□□□□□ -1.01
RPGRIP1-204ENST00000553927 CCDC146Q8IYE0 955 aa8.74□□□□□ -1.01
RPGRIP1-204ENST00000553927 TBC1D2Q9BYX2 928 aa8.73□□□□□ -1.01
RPGRIP1-204ENST00000553927 UGGT2Q9NYU1 1516 aa8.72□□□□□ -1.01
RPGRIP1-204ENST00000553927 ESPNB1AK53 854 aa8.72□□□□□ -1.01
RPGRIP1-204ENST00000553927 ANTXR1Q9H6X2 564 aa8.72□□□□□ -1.01
RPGRIP1-204ENST00000553927 ZNF777Q9ULD5 760 aaPredicted RBP8.72□□□□□ -1.01
RPGRIP1-204ENST00000553927 ROCK2O75116 1388 aaKnown RBP8.72□□□□□ -1.01
RPGRIP1-204ENST00000553927 TRAK2O60296 914 aa8.71□□□□□ -1.01
RPGRIP1-204ENST00000553927 TMEM132AQ24JP5 1023 aa8.71□□□□□ -1.01
RPGRIP1-204ENST00000553927 DUSP27Q5VZP5 1158 aa8.71□□□□□ -1.01
RPGRIP1-204ENST00000553927 PLEKHH1Q9ULM0 1364 aa8.71□□□□□ -1.01
RPGRIP1-204ENST00000553927 KDM5CP41229 1560 aa8.71□□□□□ -1.01
RPGRIP1-204ENST00000553927 FSD2A1L4K1 749 aa8.71□□□□□ -1.02
RPGRIP1-204ENST00000553927 MCM4P33991 863 aa8.71□□□□□ -1.02
RPGRIP1-204ENST00000553927 MYH16Q9H6N6 1097 aa8.71□□□□□ -1.02
RPGRIP1-204ENST00000553927 EHBP1L1Q8N3D4 1523 aa8.71□□□□□ -1.02
RPGRIP1-204ENST00000553927 TRIM44Q96DX7 344 aaPredicted RBP8.71□□□□□ -1.02
RPGRIP1-204ENST00000553927 PANK1Q8TE04 598 aa8.7□□□□□ -1.02
RPGRIP1-204ENST00000553927 SPINK5Q9NQ38 1064 aaPredicted RBP8.7□□□□□ -1.02
RPGRIP1-204ENST00000553927 COG6Q9Y2V7 657 aa8.7□□□□□ -1.02
RPGRIP1-204ENST00000553927 GRIN2BQ13224 1484 aa8.7□□□□□ -1.02
RPGRIP1-204ENST00000553927 CANXP27824 592 aaKnown RBP8.7□□□□□ -1.02
RPGRIP1-204ENST00000553927 RGL3Q3MIN7 710 aa8.7□□□□□ -1.02
RPGRIP1-204ENST00000553927 GRPEL1Q9HAV7 217 aa8.7□□□□□ -1.02
RPGRIP1-204ENST00000553927 CDK13Q14004 1512 aaKnown RBP8.69□□□□□ -1.02
RPGRIP1-204ENST00000553927 PARD3Q8TEW0 1356 aa8.69□□□□□ -1.02
RPGRIP1-204ENST00000553927 PANK3Q9H999 370 aa8.69□□□□□ -1.02
RPGRIP1-204ENST00000553927 WDR43Q15061 677 aaKnown RBP eCLIP8.69□□□□□ -1.02
RPGRIP1-204ENST00000553927 KIAA1211Q6ZU35 1233 aa8.69□□□□□ -1.02
RPGRIP1-204ENST00000553927 THOC2Q8NI27 1593 aaKnown RBP8.68□□□□□ -1.02
RPGRIP1-204ENST00000553927 ZBTB7CA1YPR0 619 aa8.68□□□□□ -1.02
RPGRIP1-204ENST00000553927 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.68□□□□□ -1.02
RPGRIP1-204ENST00000553927 DAPK1P53355 1430 aa8.68□□□□□ -1.02
RPGRIP1-204ENST00000553927 MBD5Q9P267 1494 aa8.68□□□□□ -1.02
RPGRIP1-204ENST00000553927 GOLGA2Q08379 1002 aa8.68□□□□□ -1.02
RPGRIP1-204ENST00000553927 NBPF1Q3BBV0 1214 aa8.68□□□□□ -1.02
RPGRIP1-204ENST00000553927 FOXD4L1Q9NU39 408 aa8.68□□□□□ -1.02
RPGRIP1-204ENST00000553927 FAM13BQ9NYF5 915 aa8.68□□□□□ -1.02
RPGRIP1-204ENST00000553927 PZPP20742 1482 aa8.68□□□□□ -1.02
RPGRIP1-204ENST00000553927 UPF2Q9HAU5 1272 aaKnown RBP8.67□□□□□ -1.02
RPGRIP1-204ENST00000553927 PRDM10Q9NQV6 1147 aa8.67□□□□□ -1.02
RPGRIP1-204ENST00000553927 TCOF1Q13428 1488 aaKnown RBP8.67□□□□□ -1.02
RPGRIP1-204ENST00000553927 MRE11P49959 708 aa8.67□□□□□ -1.02
RPGRIP1-204ENST00000553927 MFAP1P55081 439 aaKnown RBP8.67□□□□□ -1.02
RPGRIP1-204ENST00000553927 GAS2L3Q86XJ1 694 aa8.67□□□□□ -1.02
RPGRIP1-204ENST00000553927 ABCC5O15440 1437 aa8.67□□□□□ -1.02
RPGRIP1-204ENST00000553927 PER1O15534 1290 aaPredicted RBP8.67□□□□□ -1.02
RPGRIP1-204ENST00000553927 DMRT2Q9Y5R5 561 aa8.67□□□□□ -1.02
RPGRIP1-204ENST00000553927 BLMP54132 1417 aaPredicted RBP8.66□□□□□ -1.02
RPGRIP1-204ENST00000553927 BCL2L13Q9BXK5 485 aa8.66□□□□□ -1.02
RPGRIP1-204ENST00000553927 TNNQ9UQP3 1299 aa8.66□□□□□ -1.02
RPGRIP1-204ENST00000553927 KIF14Q15058 1648 aa8.66□□□□□ -1.02
RPGRIP1-204ENST00000553927 TDRD9Q8NDG6 1382 aaKnown RBP8.65□□□□□ -1.02
RPGRIP1-204ENST00000553927 NLRP1Q9C000 1473 aa8.65□□□□□ -1.02
RPGRIP1-204ENST00000553927 CLUAP1Q96AJ1 413 aa8.65□□□□□ -1.03
RPGRIP1-204ENST00000553927 TBC1D32Q96NH3 1257 aa8.65□□□□□ -1.03
RPGRIP1-204ENST00000553927 ZHX1Q9UKY1 873 aaPredicted RBP8.65□□□□□ -1.03
RPGRIP1-204ENST00000553927 ZMYM4Q5VZL5 1548 aa8.65□□□□□ -1.03
RPGRIP1-204ENST00000553927 DISP3Q9P2K9 1392 aa8.64□□□□□ -1.03
RPGRIP1-204ENST00000553927 APAF1O14727 1248 aa8.64□□□□□ -1.03
RPGRIP1-204ENST00000553927 PDCL3Q9H2J4 239 aa8.64□□□□□ -1.03
RPGRIP1-204ENST00000553927 ARHGEF11O15085 1522 aa8.64□□□□□ -1.03
RPGRIP1-204ENST00000553927 KIAA1107Q9UPP5 1409 aa8.64□□□□□ -1.03
RPGRIP1-204ENST00000553927 CTTNBP2Q8WZ74 1663 aa8.64□□□□□ -1.03
RPGRIP1-204ENST00000553927 NEUROD2Q15784 382 aa8.64□□□□□ -1.03
RPGRIP1-204ENST00000553927 PRDM4Q9UKN5 801 aa8.64□□□□□ -1.03
RPGRIP1-204ENST00000553927 RALGAPBQ86X10 1494 aa8.64□□□□□ -1.03
RPGRIP1-204ENST00000553927 SLFN5Q08AF3 891 aa8.63□□□□□ -1.03
RPGRIP1-204ENST00000553927 TPM2P07951 284 aa8.63□□□□□ -1.03
RPGRIP1-204ENST00000553927 R3HCC1Q9Y3T6 440 aaKnown RBP8.63□□□□□ -1.03
RPGRIP1-204ENST00000553927 C14orf37Q86TY3 774 aa8.62□□□□□ -1.03
RPGRIP1-204ENST00000553927 CHMP5Q9NZZ3 219 aa8.62□□□□□ -1.03
RPGRIP1-204ENST00000553927 PDZRN3Q9UPQ7 1066 aa8.62□□□□□ -1.03
RPGRIP1-204ENST00000553927 NUP155O75694 1391 aa8.62□□□□□ -1.03
RPGRIP1-204ENST00000553927 RIPK4P57078 832 aa8.62□□□□□ -1.03
RPGRIP1-204ENST00000553927 PCDHB15Q9Y5E8 787 aa8.62□□□□□ -1.03
RPGRIP1-204ENST00000553927 MAPK8IP3Q9UPT6 1336 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms