RNA–Protein interactions for RNA: ENST00000553925.1

SEC23A-205, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 3

Gene SEC23A, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-205ENST00000553925 IRX2Q9BZI1 471 aaPredicted RBP9.93□□□□□ -0.82
SEC23A-205ENST00000553925 A0A0G2JS52 829 aa9.92□□□□□ -0.82
SEC23A-205ENST00000553925 PPP1R3GB7ZBB8 358 aa9.92□□□□□ -0.82
SEC23A-205ENST00000553925 VSIG10Q8N0Z9 540 aa9.92□□□□□ -0.82
SEC23A-205ENST00000553925 EMILIN3Q9NT22 766 aa9.92□□□□□ -0.82
SEC23A-205ENST00000553925 PCDHGA10Q9Y5H3 936 aa9.91□□□□□ -0.82
SEC23A-205ENST00000553925 COL9A1P20849 921 aa9.9□□□□□ -0.82
SEC23A-205ENST00000553925 BCAMP50895 628 aa9.89□□□□□ -0.83
SEC23A-205ENST00000553925 MFSD10Q14728 455 aa9.89□□□□□ -0.83
SEC23A-205ENST00000553925 TYW1BQ6NUM6 668 aa9.89□□□□□ -0.83
SEC23A-205ENST00000553925 RABGEF1Q9UJ41 708 aa9.89□□□□□ -0.83
SEC23A-205ENST00000553925 RGS20O76081 388 aa9.88□□□□□ -0.83
SEC23A-205ENST00000553925 IFFO2Q5TF58 517 aa9.88□□□□□ -0.83
SEC23A-205ENST00000553925 CADPS2Q86UW7 1296 aa9.86□□□□□ -0.83
SEC23A-205ENST00000553925 FBXW7Q969H0 707 aa9.86□□□□□ -0.83
SEC23A-205ENST00000553925 RBM33Q96EV2 1170 aaKnown RBP9.85□□□□□ -0.83
SEC23A-205ENST00000553925 KIAA1468Q9P260 1216 aa9.85□□□□□ -0.83
SEC23A-205ENST00000553925 SEPT9Q9UHD8 586 aaPredicted RBP9.85□□□□□ -0.83
SEC23A-205ENST00000553925 PHF14O94880 888 aa9.84□□□□□ -0.83
SEC23A-205ENST00000553925 TSHZ2Q9NRE2 1034 aa9.84□□□□□ -0.83
SEC23A-205ENST00000553925 DPYSL4O14531 572 aa9.82□□□□□ -0.84
SEC23A-205ENST00000553925 SOWAHBA6NEL2 793 aa9.81□□□□□ -0.84
SEC23A-205ENST00000553925 ZFRQ96KR1 1074 aaKnown RBP9.81□□□□□ -0.84
SEC23A-205ENST00000553925 C6orf132Q5T0Z8 1188 aa9.8□□□□□ -0.84
SEC23A-205ENST00000553925 LAPTM4BQ86VI4 370 aa9.8□□□□□ -0.84
SEC23A-205ENST00000553925 DDX12PQ92771 950 aa9.79□□□□□ -0.84
SEC23A-205ENST00000553925 EPAS1Q99814 870 aa9.79□□□□□ -0.84
SEC23A-205ENST00000553925 WBP1LQ9NX94 342 aa9.79□□□□□ -0.84
SEC23A-205ENST00000553925 ITGBL1O95965 494 aaPredicted RBP9.76□□□□□ -0.85
SEC23A-205ENST00000553925 KCNC4Q03721 635 aa9.76□□□□□ -0.85
SEC23A-205ENST00000553925 KDM2AQ9Y2K7 1162 aa9.76□□□□□ -0.85
SEC23A-205ENST00000553925 TRIM6-TRIM34B2RNG4 842 aa9.75□□□□□ -0.85
SEC23A-205ENST00000553925 Q6ZNB5 142 aa9.75□□□□□ -0.85
SEC23A-205ENST00000553925 LRCH3Q96II8 777 aa9.75□□□□□ -0.85
SEC23A-205ENST00000553925 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.75□□□□□ -0.85
SEC23A-205ENST00000553925 HPS5Q9UPZ3 1129 aa9.75□□□□□ -0.85
SEC23A-205ENST00000553925 FAM98CQ17RN3 349 aaKnown RBP9.74□□□□□ -0.85
SEC23A-205ENST00000553925 NYAP1Q6ZVC0 841 aa9.74□□□□□ -0.85
SEC23A-205ENST00000553925 MAP3K7O43318 606 aa9.73□□□□□ -0.85
SEC23A-205ENST00000553925 NBR1Q14596 966 aa9.73□□□□□ -0.85
SEC23A-205ENST00000553925 TSR3Q9UJK0 312 aaKnown RBP9.72□□□□□ -0.85
SEC23A-205ENST00000553925 ONECUT3O60422 494 aaPredicted RBP9.71□□□□□ -0.86
SEC23A-205ENST00000553925 CAMK2BQ13554 666 aa9.7□□□□□ -0.86
SEC23A-205ENST00000553925 TSR1Q2NL82 804 aaKnown RBP9.69□□□□□ -0.86
SEC23A-205ENST00000553925 PACS2Q86VP3 889 aa9.69□□□□□ -0.86
SEC23A-205ENST00000553925 BCANQ96GW7 911 aa9.69□□□□□ -0.86
SEC23A-205ENST00000553925 PPP4CP60510 307 aa9.67□□□□□ -0.86
SEC23A-205ENST00000553925 SMAPO00193 183 aa9.66□□□□□ -0.86
SEC23A-205ENST00000553925 EN1Q05925 392 aaPredicted RBP9.66□□□□□ -0.86
SEC23A-205ENST00000553925 TSKSQ9UJT2 592 aa9.66□□□□□ -0.86
SEC23A-205ENST00000553925 RNF40O75150 1001 aa9.65□□□□□ -0.86
SEC23A-205ENST00000553925 GRXCR2A6NFK2 248 aa9.62□□□□□ -0.87
SEC23A-205ENST00000553925 SAMD7Q7Z3H4 446 aa9.62□□□□□ -0.87
SEC23A-205ENST00000553925 CDCA7LQ96GN5 454 aa9.61□□□□□ -0.87
SEC23A-205ENST00000553925 PDIA6Q15084 440 aa9.6□□□□□ -0.87
SEC23A-205ENST00000553925 PNMA3Q9UL41 463 aa9.6□□□□□ -0.87
SEC23A-205ENST00000553925 GFRA3O60609 400 aa9.59□□□□□ -0.87
SEC23A-205ENST00000553925 WDR70Q9NW82 654 aa9.59□□□□□ -0.87
SEC23A-205ENST00000553925 SPDYE16A6NNV3 312 aaPredicted RBP9.58□□□□□ -0.88
SEC23A-205ENST00000553925 PRSS12P56730 875 aa9.58□□□□□ -0.88
SEC23A-205ENST00000553925 NBPF26B4DH59 902 aa9.57□□□□□ -0.88
SEC23A-205ENST00000553925 P3H3Q8IVL6 736 aa9.57□□□□□ -0.88
SEC23A-205ENST00000553925 PRKD2Q9BZL6 878 aa9.57□□□□□ -0.88
SEC23A-205ENST00000553925 HDGFP51858 240 aaKnown RBP9.56□□□□□ -0.88
SEC23A-205ENST00000553925 LAPTM4AQ15012 233 aa9.56□□□□□ -0.88
SEC23A-205ENST00000553925 MTRQ99707 1265 aa9.56□□□□□ -0.88
SEC23A-205ENST00000553925 FAM198AQ9UFP1 575 aa9.56□□□□□ -0.88
SEC23A-205ENST00000553925 TJAP1Q5JTD0 557 aa9.55□□□□□ -0.88
SEC23A-205ENST00000553925 TATDN2Q93075 761 aa9.55□□□□□ -0.88
SEC23A-205ENST00000553925 E2F4Q16254 413 aa9.54□□□□□ -0.88
SEC23A-205ENST00000553925 CERKQ8TCT0 537 aa9.54□□□□□ -0.88
SEC23A-205ENST00000553925 IL21Q9HBE4 155 aa9.54□□□□□ -0.88
SEC23A-205ENST00000553925 C3orf80F5H4A9 247 aa9.53□□□□□ -0.88
SEC23A-205ENST00000553925 PRIM1P49642 420 aaKnown RBP9.53□□□□□ -0.88
SEC23A-205ENST00000553925 CDHR5Q9HBB8 845 aa9.53□□□□□ -0.88
SEC23A-205ENST00000553925 PPP1R18Q6NYC8 613 aa9.52□□□□□ -0.89
SEC23A-205ENST00000553925 TRAF7Q6Q0C0 670 aa9.52□□□□□ -0.89
SEC23A-205ENST00000553925 NUDT18Q6ZVK8 323 aa9.52□□□□□ -0.89
SEC23A-205ENST00000553925 ZNF516Q92618 1163 aa9.51□□□□□ -0.89
SEC23A-205ENST00000553925 COPS2P61201 443 aa9.49□□□□□ -0.89
SEC23A-205ENST00000553925 APLP1P51693 650 aa9.48□□□□□ -0.89
SEC23A-205ENST00000553925 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.48□□□□□ -0.89
SEC23A-205ENST00000553925 NKX2-3Q8TAU0 364 aa9.47□□□□□ -0.89
SEC23A-205ENST00000553925 NRG2O14511 850 aaPredicted RBP9.46□□□□□ -0.9
SEC23A-205ENST00000553925 LCE2BO14633 110 aa9.45□□□□□ -0.9
SEC23A-205ENST00000553925 OSBPP22059 807 aa9.45□□□□□ -0.9
SEC23A-205ENST00000553925 SWT1Q5T5J6 900 aaKnown RBP9.45□□□□□ -0.9
SEC23A-205ENST00000553925 GGCXP38435 758 aa9.44□□□□□ -0.9
SEC23A-205ENST00000553925 SLC4A3P48751 1232 aa9.44□□□□□ -0.9
SEC23A-205ENST00000553925 PADI6Q6TGC4 694 aa9.44□□□□□ -0.9
SEC23A-205ENST00000553925 KCNV2Q8TDN2 545 aa9.44□□□□□ -0.9
SEC23A-205ENST00000553925 V9GY48 417 aaPredicted RBP9.44□□□□□ -0.9
SEC23A-205ENST00000553925 SLF2Q8IX21 1173 aa9.43□□□□□ -0.9
SEC23A-205ENST00000553925 PDZRN3Q9UPQ7 1066 aa9.43□□□□□ -0.9
SEC23A-205ENST00000553925 NECTIN2Q92692 538 aa9.42□□□□□ -0.9
SEC23A-205ENST00000553925 RBM27Q9P2N5 1060 aaKnown RBP9.41□□□□□ -0.9
SEC23A-205ENST00000553925 ARHGEF1Q92888 912 aaKnown RBP9.39□□□□□ -0.91
SEC23A-205ENST00000553925 ZNF787Q6DD87 383 aa9.38□□□□□ -0.91
SEC23A-205ENST00000553925 ARIH1Q9Y4X5 557 aaPredicted RBP9.38□□□□□ -0.91
SEC23A-205ENST00000553925 PCDHB3Q9Y5E6 796 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms