RNA–Protein interactions for RNA: ENST00000553817.1

KLHL28-203, Transcript of kelch like family member 28, humanhuman

TSL 4

Gene KLHL28, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-203ENST00000553817 ERBB3P21860 1342 aa7.49□□□□□ -1.21
KLHL28-203ENST00000553817 EMP3P54852 163 aa7.48□□□□□ -1.21
KLHL28-203ENST00000553817 BCL2L12Q9HB09 334 aa7.48□□□□□ -1.21
KLHL28-203ENST00000553817 GNPATO15228 680 aa7.47□□□□□ -1.21
KLHL28-203ENST00000553817 CERKQ8TCT0 537 aa7.47□□□□□ -1.21
KLHL28-203ENST00000553817 MARVELD3Q96A59 401 aa7.47□□□□□ -1.21
KLHL28-203ENST00000553817 NPDC1Q9NQX5 325 aaPredicted RBP7.47□□□□□ -1.21
KLHL28-203ENST00000553817 VARS2Q5ST30 1063 aaKnown RBP7.46□□□□□ -1.22
KLHL28-203ENST00000553817 KRI1Q8N9T8 703 aaKnown RBP7.46□□□□□ -1.22
KLHL28-203ENST00000553817 PTPREP23469 700 aa7.45□□□□□ -1.22
KLHL28-203ENST00000553817 SLC24A3Q9HC58 644 aa7.45□□□□□ -1.22
KLHL28-203ENST00000553817 FAM205CA6NFA0 338 aa7.44□□□□□ -1.22
KLHL28-203ENST00000553817 LCE2DQ5TA82 110 aaPredicted RBP7.44□□□□□ -1.22
KLHL28-203ENST00000553817 MAP2K5Q13163 448 aa7.43□□□□□ -1.22
KLHL28-203ENST00000553817 MINK1Q8N4C8 1332 aaPredicted RBP7.43□□□□□ -1.22
KLHL28-203ENST00000553817 PPP1R3GB7ZBB8 358 aa7.42□□□□□ -1.22
KLHL28-203ENST00000553817 FECHP22830 423 aa7.42□□□□□ -1.22
KLHL28-203ENST00000553817 KCNH8Q96L42 1107 aa7.42□□□□□ -1.22
KLHL28-203ENST00000553817 AK7Q96M32 723 aa7.42□□□□□ -1.22
KLHL28-203ENST00000553817 COL9A1P20849 921 aa7.41□□□□□ -1.22
KLHL28-203ENST00000553817 ZNF687Q8N1G0 1237 aa7.41□□□□□ -1.22
KLHL28-203ENST00000553817 HS3ST6Q96QI5 342 aa7.41□□□□□ -1.22
KLHL28-203ENST00000553817 KCNK17Q96T54 332 aa7.41□□□□□ -1.22
KLHL28-203ENST00000553817 RBM27Q9P2N5 1060 aaKnown RBP7.41□□□□□ -1.22
KLHL28-203ENST00000553817 ARHGAP33O14559 1287 aa7.4□□□□□ -1.22
KLHL28-203ENST00000553817 IRF6O14896 467 aa7.4□□□□□ -1.22
KLHL28-203ENST00000553817 PRSS12P56730 875 aa7.4□□□□□ -1.22
KLHL28-203ENST00000553817 POTEB3A0JP26 581 aa7.39□□□□□ -1.23
KLHL28-203ENST00000553817 PBX2P40425 430 aa7.39□□□□□ -1.23
KLHL28-203ENST00000553817 POTEBQ6S5H4 581 aa7.39□□□□□ -1.23
KLHL28-203ENST00000553817 PADI6Q6TGC4 694 aa7.39□□□□□ -1.23
KLHL28-203ENST00000553817 TTC13Q8NBP0 860 aa7.39□□□□□ -1.23
KLHL28-203ENST00000553817 CDCA7LQ96GN5 454 aa7.39□□□□□ -1.23
KLHL28-203ENST00000553817 PSEN2P49810 448 aa7.38□□□□□ -1.23
KLHL28-203ENST00000553817 POTEEQ6S8J3 1075 aa7.38□□□□□ -1.23
KLHL28-203ENST00000553817 CCDC102AQ96A19 550 aa7.38□□□□□ -1.23
KLHL28-203ENST00000553817 TRIM66O15016 1216 aa7.37□□□□□ -1.23
KLHL28-203ENST00000553817 ONECUT3O60422 494 aaPredicted RBP7.36□□□□□ -1.23
KLHL28-203ENST00000553817 ZBED2Q9BTP6 218 aa7.36□□□□□ -1.23
KLHL28-203ENST00000553817 AXIN2Q9Y2T1 843 aa7.36□□□□□ -1.23
KLHL28-203ENST00000553817 TRIM6-TRIM34B2RNG4 842 aa7.35□□□□□ -1.23
KLHL28-203ENST00000553817 OATP04181 439 aa7.35□□□□□ -1.23
KLHL28-203ENST00000553817 SLC4A5Q9BY07 1137 aa7.35□□□□□ -1.23
KLHL28-203ENST00000553817 FAM198AQ9UFP1 575 aa7.35□□□□□ -1.23
KLHL28-203ENST00000553817 TSKSQ9UJT2 592 aa7.35□□□□□ -1.23
KLHL28-203ENST00000553817 ADGRG1Q9Y653 693 aa7.35□□□□□ -1.23
KLHL28-203ENST00000553817 PROX2Q3B8N5 592 aa7.34□□□□□ -1.23
KLHL28-203ENST00000553817 DMRTA1Q5VZB9 504 aa7.34□□□□□ -1.23
KLHL28-203ENST00000553817 PACS2Q86VP3 889 aa7.34□□□□□ -1.23
KLHL28-203ENST00000553817 FAM161AQ3B820 660 aa7.33□□□□□ -1.24
KLHL28-203ENST00000553817 RBM46Q8TBY0 533 aaKnown RBP7.33□□□□□ -1.24
KLHL28-203ENST00000553817 NBPF26B4DH59 902 aa7.32□□□□□ -1.24
KLHL28-203ENST00000553817 BRPF1P55201 1214 aaPredicted RBP7.32□□□□□ -1.24
KLHL28-203ENST00000553817 PDE4DQ08499 809 aa7.32□□□□□ -1.24
KLHL28-203ENST00000553817 AMHR2Q16671 573 aa7.32□□□□□ -1.24
KLHL28-203ENST00000553817 NEUROD2Q15784 382 aa7.31□□□□□ -1.24
KLHL28-203ENST00000553817 METTL3Q86U44 580 aaKnown RBP7.31□□□□□ -1.24
KLHL28-203ENST00000553817 PXYLP1Q8TE99 480 aa7.31□□□□□ -1.24
KLHL28-203ENST00000553817 TATDN2Q93075 761 aa7.31□□□□□ -1.24
KLHL28-203ENST00000553817 KIAA1468Q9P260 1216 aa7.31□□□□□ -1.24
KLHL28-203ENST00000553817 TK2O00142 265 aa7.3□□□□□ -1.24
KLHL28-203ENST00000553817 NUDT18Q6ZVK8 323 aa7.3□□□□□ -1.24
KLHL28-203ENST00000553817 EYA1Q99502 592 aa7.3□□□□□ -1.24
KLHL28-203ENST00000553817 RABGEF1Q9UJ41 708 aa7.3□□□□□ -1.24
KLHL28-203ENST00000553817 PNMA3Q9UL41 463 aa7.3□□□□□ -1.24
KLHL28-203ENST00000553817 VPS9D1Q9Y2B5 631 aa7.3□□□□□ -1.24
KLHL28-203ENST00000553817 LSM11P83369 360 aaKnown RBP eCLIP7.29□□□□□ -1.24
KLHL28-203ENST00000553817 PHOX2BQ99453 314 aa7.29□□□□□ -1.24
KLHL28-203ENST00000553817 C3orf80F5H4A9 247 aa7.28□□□□□ -1.24
KLHL28-203ENST00000553817 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.27□□□□□ -1.25
KLHL28-203ENST00000553817 RCCD1A6NED2 376 aa7.27□□□□□ -1.25
KLHL28-203ENST00000553817 SMAPO00193 183 aa7.27□□□□□ -1.25
KLHL28-203ENST00000553817 CLCN1P35523 988 aa7.27□□□□□ -1.25
KLHL28-203ENST00000553817 MDM2Q00987 491 aaPredicted RBP7.27□□□□□ -1.25
KLHL28-203ENST00000553817 TTLL12Q14166 644 aaPredicted RBP7.27□□□□□ -1.25
KLHL28-203ENST00000553817 POTEGQ6S5H5 508 aa7.27□□□□□ -1.25
KLHL28-203ENST00000553817 PARP9Q8IXQ6 854 aa7.27□□□□□ -1.25
KLHL28-203ENST00000553817 POTEMA6NI47 508 aa7.26□□□□□ -1.25
KLHL28-203ENST00000553817 ADGRD1Q6QNK2 874 aa7.26□□□□□ -1.25
KLHL28-203ENST00000553817 TMUB1Q9BVT8 246 aa7.26□□□□□ -1.25
KLHL28-203ENST00000553817 NBPF3Q9H094 633 aa7.26□□□□□ -1.25
KLHL28-203ENST00000553817 KDM4CQ9H3R0 1056 aa7.26□□□□□ -1.25
KLHL28-203ENST00000553817 GPBP1L1Q9HC44 474 aaPredicted RBP7.26□□□□□ -1.25
KLHL28-203ENST00000553817 BHMG1C9JSJ3 638 aaPredicted RBP7.25□□□□□ -1.25
KLHL28-203ENST00000553817 DNAJB2P25686 324 aa7.25□□□□□ -1.25
KLHL28-203ENST00000553817 ANKRD13DQ6ZTN6 518 aa7.25□□□□□ -1.25
KLHL28-203ENST00000553817 NLRP7Q8WX94 980 aa7.25□□□□□ -1.25
KLHL28-203ENST00000553817 GPCPD1Q9NPB8 672 aa7.25□□□□□ -1.25
KLHL28-203ENST00000553817 FAM98CQ17RN3 349 aaKnown RBP7.24□□□□□ -1.25
KLHL28-203ENST00000553817 LAPTM4BQ86VI4 370 aa7.24□□□□□ -1.25
KLHL28-203ENST00000553817 REPIN1Q9BWE0 567 aaKnown RBP7.24□□□□□ -1.25
KLHL28-203ENST00000553817 KRTAP3-3Q9BYR6 98 aa7.24□□□□□ -1.25
KLHL28-203ENST00000553817 KRTAP3-2Q9BYR7 98 aa7.24□□□□□ -1.25
KLHL28-203ENST00000553817 SEPT9Q9UHD8 586 aaPredicted RBP7.24□□□□□ -1.25
KLHL28-203ENST00000553817 HRO43593 1189 aa7.23□□□□□ -1.25
KLHL28-203ENST00000553817 GIGYF2Q6Y7W6 1299 aaKnown RBP7.23□□□□□ -1.25
KLHL28-203ENST00000553817 TMEM134Q9H6X4 195 aa7.23□□□□□ -1.25
KLHL28-203ENST00000553817 DAXXQ9UER7 740 aaPredicted RBP7.23□□□□□ -1.25
KLHL28-203ENST00000553817 CDAN1Q8IWY9 1227 aa7.22□□□□□ -1.25
KLHL28-203ENST00000553817 MRPL50Q8N5N7 158 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms