RNA–Protein interactions for RNA: ENST00000553804.5

ITGA7-206, Transcript of integrin subunit alpha 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGA7, Length 3,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-206ENST00000553804 NCLP19338 710 aaKnown RBP13.45□□□□□ -0.26
ITGA7-206ENST00000553804 PRG4Q92954 1404 aaPredicted RBP13.44□□□□□ -0.26
ITGA7-206ENST00000553804 C20orf194Q5TEA3 1177 aa13.44□□□□□ -0.26
ITGA7-206ENST00000553804 ST20-MTHFSA0A0A6YYL1 179 aa13.43□□□□□ -0.26
ITGA7-206ENST00000553804 MYH16Q9H6N6 1097 aa13.43□□□□□ -0.26
ITGA7-206ENST00000553804 OSCARQ8IYS5 282 aa13.43□□□□□ -0.26
ITGA7-206ENST00000553804 AMER1Q5JTC6 1135 aaPredicted RBP13.42□□□□□ -0.26
ITGA7-206ENST00000553804 PODXL2Q9NZ53 605 aa13.41□□□□□ -0.26
ITGA7-206ENST00000553804 CYB5RLQ6IPT4 315 aa13.41□□□□□ -0.26
ITGA7-206ENST00000553804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.41□□□□□ -0.26
ITGA7-206ENST00000553804 PTPRGP23470 1445 aa13.41□□□□□ -0.26
ITGA7-206ENST00000553804 PTPRKQ15262 1439 aa13.41□□□□□ -0.26
ITGA7-206ENST00000553804 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
ITGA7-206ENST00000553804 CCDC146Q8IYE0 955 aa13.4□□□□□ -0.26
ITGA7-206ENST00000553804 UACAQ9BZF9 1416 aa13.4□□□□□ -0.26
ITGA7-206ENST00000553804 EPRSP07814 1512 aaKnown RBP13.4□□□□□ -0.26
ITGA7-206ENST00000553804 TSPY4P0CV99 314 aa13.4□□□□□ -0.26
ITGA7-206ENST00000553804 TSPY10P0CW01 314 aa13.4□□□□□ -0.26
ITGA7-206ENST00000553804 CENPQQ7L2Z9 268 aaPredicted RBP13.39□□□□□ -0.27
ITGA7-206ENST00000553804 RRAGDQ9NQL2 400 aaPredicted RBP13.39□□□□□ -0.27
ITGA7-206ENST00000553804 TPRNQ4KMQ1 711 aa13.39□□□□□ -0.27
ITGA7-206ENST00000553804 CEP170Q5SW79 1584 aa13.39□□□□□ -0.27
ITGA7-206ENST00000553804 NLRP13Q86W25 1043 aa13.38□□□□□ -0.27
ITGA7-206ENST00000553804 PKD2Q13563 968 aa13.38□□□□□ -0.27
ITGA7-206ENST00000553804 MYBBP1AQ9BQG0 1328 aaKnown RBP13.37□□□□□ -0.27
ITGA7-206ENST00000553804 USP47Q96K76 1375 aa13.37□□□□□ -0.27
ITGA7-206ENST00000553804 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
ITGA7-206ENST00000553804 CLUAP1Q96AJ1 413 aa13.37□□□□□ -0.27
ITGA7-206ENST00000553804 PLB1Q6P1J6 1458 aa13.37□□□□□ -0.27
ITGA7-206ENST00000553804 MFAP1P55081 439 aaKnown RBP13.36□□□□□ -0.27
ITGA7-206ENST00000553804 RBM10P98175 930 aaKnown RBP13.36□□□□□ -0.27
ITGA7-206ENST00000553804 PANK2Q9BZ23 570 aa13.36□□□□□ -0.27
ITGA7-206ENST00000553804 RALBP1Q15311 655 aa13.36□□□□□ -0.27
ITGA7-206ENST00000553804 FAM13BQ9NYF5 915 aa13.35□□□□□ -0.27
ITGA7-206ENST00000553804 EHBP1L1Q8N3D4 1523 aa13.35□□□□□ -0.27
ITGA7-206ENST00000553804 HNRNPMP52272 730 aaKnown RBP eCLIP13.35□□□□□ -0.27
ITGA7-206ENST00000553804 PDE3BQ13370 1112 aa13.35□□□□□ -0.27
ITGA7-206ENST00000553804 PLPPR3Q6T4P5 718 aa13.34□□□□□ -0.27
ITGA7-206ENST00000553804 KTN1Q86UP2 1357 aaKnown RBP13.34□□□□□ -0.27
ITGA7-206ENST00000553804 SUPT6HQ7KZ85 1726 aaKnown RBP13.34□□□□□ -0.27
ITGA7-206ENST00000553804 NAIPQ13075 1403 aa13.34□□□□□ -0.27
ITGA7-206ENST00000553804 TNNT2P45379 298 aaPredicted RBP13.34□□□□□ -0.27
ITGA7-206ENST00000553804 NUP160Q12769 1436 aa13.34□□□□□ -0.27
ITGA7-206ENST00000553804 COG6Q9Y2V7 657 aa13.33□□□□□ -0.28
ITGA7-206ENST00000553804 BCL2L13Q9BXK5 485 aa13.33□□□□□ -0.28
ITGA7-206ENST00000553804 SENP3Q9H4L4 574 aaPredicted RBP13.33□□□□□ -0.28
ITGA7-206ENST00000553804 HECW1Q76N89 1606 aa13.33□□□□□ -0.28
ITGA7-206ENST00000553804 HFM1A2PYH4 1435 aa13.33□□□□□ -0.28
ITGA7-206ENST00000553804 MSNP26038 577 aaKnown RBP13.33□□□□□ -0.28
ITGA7-206ENST00000553804 DNTTIP2Q5QJE6 756 aaKnown RBP13.32□□□□□ -0.28
ITGA7-206ENST00000553804 KNSTRNQ9Y448 316 aa13.32□□□□□ -0.28
ITGA7-206ENST00000553804 DISP1Q96F81 1524 aa13.32□□□□□ -0.28
ITGA7-206ENST00000553804 SAMD9Q5K651 1589 aa13.31□□□□□ -0.28
ITGA7-206ENST00000553804 HSP90AB1P08238 724 aaKnown RBP13.31□□□□□ -0.28
ITGA7-206ENST00000553804 KIF15Q9NS87 1388 aa13.31□□□□□ -0.28
ITGA7-206ENST00000553804 UGGT2Q9NYU1 1516 aa13.31□□□□□ -0.28
ITGA7-206ENST00000553804 CHD1O14646 1710 aa13.31□□□□□ -0.28
ITGA7-206ENST00000553804 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
ITGA7-206ENST00000553804 MAGI3Q5TCQ9 1506 aa13.31□□□□□ -0.28
ITGA7-206ENST00000553804 KIAA0556O60303 1618 aa13.3□□□□□ -0.28
ITGA7-206ENST00000553804 HSCBQ8IWL3 235 aa13.3□□□□□ -0.28
ITGA7-206ENST00000553804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.3□□□□□ -0.28
ITGA7-206ENST00000553804 PTPN23Q9H3S7 1636 aa13.3□□□□□ -0.28
ITGA7-206ENST00000553804 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
ITGA7-206ENST00000553804 RRP9O43818 475 aaKnown RBP13.28□□□□□ -0.28
ITGA7-206ENST00000553804 TRAK2O60296 914 aa13.28□□□□□ -0.28
ITGA7-206ENST00000553804 PANK3Q9H999 370 aa13.27□□□□□ -0.28
ITGA7-206ENST00000553804 ADAMTS8Q9UP79 889 aa13.27□□□□□ -0.28
ITGA7-206ENST00000553804 PTMAP06454 111 aaKnown RBP13.27□□□□□ -0.29
ITGA7-206ENST00000553804 PANK1Q8TE04 598 aa13.27□□□□□ -0.29
ITGA7-206ENST00000553804 XRCC6P12956 609 aaKnown RBP eCLIP13.26□□□□□ -0.29
ITGA7-206ENST00000553804 BCAR3O75815 825 aa13.26□□□□□ -0.29
ITGA7-206ENST00000553804 NCOA1Q15788 1441 aa13.26□□□□□ -0.29
ITGA7-206ENST00000553804 ESPNB1AK53 854 aa13.25□□□□□ -0.29
ITGA7-206ENST00000553804 NUP153P49790 1475 aaKnown RBP13.25□□□□□ -0.29
ITGA7-206ENST00000553804 GOLGA6L22H0YM25 854 aa13.25□□□□□ -0.29
ITGA7-206ENST00000553804 FTSJ3Q8IY81 847 aaKnown RBP13.25□□□□□ -0.29
ITGA7-206ENST00000553804 APAF1O14727 1248 aa13.24□□□□□ -0.29
ITGA7-206ENST00000553804 C8orf34Q49A92 452 aa13.24□□□□□ -0.29
ITGA7-206ENST00000553804 RRP7AQ9Y3A4 280 aaKnown RBP13.24□□□□□ -0.29
ITGA7-206ENST00000553804 ROCK2O75116 1388 aaKnown RBP13.24□□□□□ -0.29
ITGA7-206ENST00000553804 NUP155O75694 1391 aa13.24□□□□□ -0.29
ITGA7-206ENST00000553804 TROQ12816 1431 aaPredicted RBP13.23□□□□□ -0.29
ITGA7-206ENST00000553804 R3HCC1Q9Y3T6 440 aaKnown RBP13.23□□□□□ -0.29
ITGA7-206ENST00000553804 MIA2Q96PC5 1412 aa13.22□□□□□ -0.29
ITGA7-206ENST00000553804 SEC24BO95487 1268 aa13.22□□□□□ -0.29
ITGA7-206ENST00000553804 KIAA1211Q6ZU35 1233 aa13.22□□□□□ -0.29
ITGA7-206ENST00000553804 RNF123Q5XPI4 1314 aa13.22□□□□□ -0.29
ITGA7-206ENST00000553804 DAPK1P53355 1430 aa13.22□□□□□ -0.29
ITGA7-206ENST00000553804 MRE11P49959 708 aa13.21□□□□□ -0.29
ITGA7-206ENST00000553804 PLCB2Q00722 1185 aa13.21□□□□□ -0.29
ITGA7-206ENST00000553804 ANKRD30AQ9BXX3 1397 aa13.21□□□□□ -0.29
ITGA7-206ENST00000553804 MCM4P33991 863 aa13.21□□□□□ -0.29
ITGA7-206ENST00000553804 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.3
ITGA7-206ENST00000553804 ERCC6L2Q5T890 1561 aa13.2□□□□□ -0.3
ITGA7-206ENST00000553804 GRPEL1Q9HAV7 217 aa13.2□□□□□ -0.3
ITGA7-206ENST00000553804 PRDM10Q9NQV6 1147 aa13.2□□□□□ -0.3
ITGA7-206ENST00000553804 ABCC5O15440 1437 aa13.2□□□□□ -0.3
ITGA7-206ENST00000553804 BRD4O60885 1362 aaPredicted RBP13.2□□□□□ -0.3
ITGA7-206ENST00000553804 LRRIQ1Q96JM4 1722 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms