RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 IFFO2Q5TF58 517 aa11.42□□□□□ -0.58
FCF1-204ENST00000553673 ANKK1Q8NFD2 765 aa11.39□□□□□ -0.59
FCF1-204ENST00000553673 RTN4Q9NQC3 1192 aaKnown RBP11.39□□□□□ -0.59
FCF1-204ENST00000553673 A0A0G2JS52 829 aa11.37□□□□□ -0.59
FCF1-204ENST00000553673 DPYSL4O14531 572 aa11.37□□□□□ -0.59
FCF1-204ENST00000553673 CAMK2BQ13554 666 aa11.37□□□□□ -0.59
FCF1-204ENST00000553673 RGS20O76081 388 aa11.35□□□□□ -0.59
FCF1-204ENST00000553673 BCAMP50895 628 aa11.35□□□□□ -0.59
FCF1-204ENST00000553673 C6orf132Q5T0Z8 1188 aa11.34□□□□□ -0.59
FCF1-204ENST00000553673 LAPTM4BQ86VI4 370 aa11.34□□□□□ -0.59
FCF1-204ENST00000553673 EPAS1Q99814 870 aa11.34□□□□□ -0.59
FCF1-204ENST00000553673 KIAA1468Q9P260 1216 aa11.34□□□□□ -0.59
FCF1-204ENST00000553673 SOWAHBA6NEL2 793 aa11.31□□□□□ -0.6
FCF1-204ENST00000553673 RBM33Q96EV2 1170 aaKnown RBP11.31□□□□□ -0.6
FCF1-204ENST00000553673 ZFRQ96KR1 1074 aaKnown RBP11.31□□□□□ -0.6
FCF1-204ENST00000553673 SEPT9Q9UHD8 586 aaPredicted RBP11.31□□□□□ -0.6
FCF1-204ENST00000553673 DDX12PQ92771 950 aa11.3□□□□□ -0.6
FCF1-204ENST00000553673 ONECUT3O60422 494 aaPredicted RBP11.29□□□□□ -0.6
FCF1-204ENST00000553673 TRIM6-TRIM34B2RNG4 842 aa11.28□□□□□ -0.6
FCF1-204ENST00000553673 ITGBL1O95965 494 aaPredicted RBP11.28□□□□□ -0.6
FCF1-204ENST00000553673 IRX2Q9BZI1 471 aaPredicted RBP11.28□□□□□ -0.6
FCF1-204ENST00000553673 WBP1LQ9NX94 342 aa11.26□□□□□ -0.61
FCF1-204ENST00000553673 NYAP1Q6ZVC0 841 aa11.25□□□□□ -0.61
FCF1-204ENST00000553673 FAM98CQ17RN3 349 aaKnown RBP11.24□□□□□ -0.61
FCF1-204ENST00000553673 BBXQ8WY36 941 aaPredicted RBP11.24□□□□□ -0.61
FCF1-204ENST00000553673 NBR1Q14596 966 aa11.23□□□□□ -0.61
FCF1-204ENST00000553673 MAP3K7O43318 606 aa11.22□□□□□ -0.61
FCF1-204ENST00000553673 EN1Q05925 392 aaPredicted RBP11.21□□□□□ -0.61
FCF1-204ENST00000553673 PDIA6Q15084 440 aa11.21□□□□□ -0.61
FCF1-204ENST00000553673 TSR1Q2NL82 804 aaKnown RBP11.21□□□□□ -0.61
FCF1-204ENST00000553673 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.21□□□□□ -0.61
FCF1-204ENST00000553673 LRCH3Q96II8 777 aa11.2□□□□□ -0.62
FCF1-204ENST00000553673 TSR3Q9UJK0 312 aaKnown RBP11.19□□□□□ -0.62
FCF1-204ENST00000553673 TSKSQ9UJT2 592 aa11.19□□□□□ -0.62
FCF1-204ENST00000553673 HPS5Q9UPZ3 1129 aa11.19□□□□□ -0.62
FCF1-204ENST00000553673 KCNC4Q03721 635 aa11.18□□□□□ -0.62
FCF1-204ENST00000553673 PACS2Q86VP3 889 aa11.17□□□□□ -0.62
FCF1-204ENST00000553673 SPDYE16A6NNV3 312 aaPredicted RBP11.15□□□□□ -0.62
FCF1-204ENST00000553673 SPRYD3Q8NCJ5 442 aa11.14□□□□□ -0.63
FCF1-204ENST00000553673 CDCA7LQ96GN5 454 aa11.12□□□□□ -0.63
FCF1-204ENST00000553673 SMAPO00193 183 aa11.11□□□□□ -0.63
FCF1-204ENST00000553673 PRIM1P49642 420 aaKnown RBP11.11□□□□□ -0.63
FCF1-204ENST00000553673 E2F4Q16254 413 aa11.11□□□□□ -0.63
FCF1-204ENST00000553673 PPP4CP60510 307 aa11.1□□□□□ -0.63
FCF1-204ENST00000553673 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.1□□□□□ -0.63
FCF1-204ENST00000553673 GRXCR2A6NFK2 248 aa11.09□□□□□ -0.63
FCF1-204ENST00000553673 PRSS12P56730 875 aa11.09□□□□□ -0.63
FCF1-204ENST00000553673 SAMD7Q7Z3H4 446 aa11.09□□□□□ -0.63
FCF1-204ENST00000553673 FAM198AQ9UFP1 575 aa11.09□□□□□ -0.63
FCF1-204ENST00000553673 CERKQ8TCT0 537 aa11.07□□□□□ -0.64
FCF1-204ENST00000553673 C3orf80F5H4A9 247 aa11.06□□□□□ -0.64
FCF1-204ENST00000553673 NBPF26B4DH59 902 aa11.05□□□□□ -0.64
FCF1-204ENST00000553673 Q6ZNB5 142 aa11.05□□□□□ -0.64
FCF1-204ENST00000553673 WDR70Q9NW82 654 aa11.05□□□□□ -0.64
FCF1-204ENST00000553673 ARIH1Q9Y4X5 557 aaPredicted RBP11.05□□□□□ -0.64
FCF1-204ENST00000553673 TATDN2Q93075 761 aa11.04□□□□□ -0.64
FCF1-204ENST00000553673 CDHR5Q9HBB8 845 aa11.04□□□□□ -0.64
FCF1-204ENST00000553673 PNMA3Q9UL41 463 aa11.04□□□□□ -0.64
FCF1-204ENST00000553673 TJAP1Q5JTD0 557 aa11.03□□□□□ -0.64
FCF1-204ENST00000553673 PAXIP1Q6ZW49 1069 aaPredicted RBP11.03□□□□□ -0.64
FCF1-204ENST00000553673 CFAP44Q96MT7 982 aa11.03□□□□□ -0.64
FCF1-204ENST00000553673 OSBPP22059 807 aa11.01□□□□□ -0.65
FCF1-204ENST00000553673 MTRQ99707 1265 aa11□□□□□ -0.65
FCF1-204ENST00000553673 RNF40O75150 1001 aa10.99□□□□□ -0.65
FCF1-204ENST00000553673 NUDT18Q6ZVK8 323 aa10.99□□□□□ -0.65
FCF1-204ENST00000553673 IL21Q9HBE4 155 aa10.97□□□□□ -0.65
FCF1-204ENST00000553673 RBM27Q9P2N5 1060 aaKnown RBP10.97□□□□□ -0.65
FCF1-204ENST00000553673 HDGFP51858 240 aaKnown RBP10.95□□□□□ -0.66
FCF1-204ENST00000553673 APLP1P51693 650 aa10.94□□□□□ -0.66
FCF1-204ENST00000553673 LAPTM4AQ15012 233 aa10.94□□□□□ -0.66
FCF1-204ENST00000553673 PRKD2Q9BZL6 878 aa10.94□□□□□ -0.66
FCF1-204ENST00000553673 GFRA3O60609 400 aa10.93□□□□□ -0.66
FCF1-204ENST00000553673 PPP1R18Q6NYC8 613 aa10.93□□□□□ -0.66
FCF1-204ENST00000553673 PADI6Q6TGC4 694 aa10.93□□□□□ -0.66
FCF1-204ENST00000553673 ZNF516Q92618 1163 aa10.93□□□□□ -0.66
FCF1-204ENST00000553673 TTC13Q8NBP0 860 aa10.92□□□□□ -0.66
FCF1-204ENST00000553673 NPDC1Q9NQX5 325 aaPredicted RBP10.92□□□□□ -0.66
FCF1-204ENST00000553673 SWT1Q5T5J6 900 aaKnown RBP10.9□□□□□ -0.66
FCF1-204ENST00000553673 LCE2BO14633 110 aa10.88□□□□□ -0.67
FCF1-204ENST00000553673 COPS2P61201 443 aa10.87□□□□□ -0.67
FCF1-204ENST00000553673 SLF2Q8IX21 1173 aa10.87□□□□□ -0.67
FCF1-204ENST00000553673 NKX2-3Q8TAU0 364 aa10.87□□□□□ -0.67
FCF1-204ENST00000553673 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.87□□□□□ -0.67
FCF1-204ENST00000553673 NECTIN2Q92692 538 aa10.86□□□□□ -0.67
FCF1-204ENST00000553673 V9GY48 417 aaPredicted RBP10.86□□□□□ -0.67
FCF1-204ENST00000553673 TRAF7Q6Q0C0 670 aa10.85□□□□□ -0.67
FCF1-204ENST00000553673 NRG2O14511 850 aaPredicted RBP10.83□□□□□ -0.68
FCF1-204ENST00000553673 EYA1Q99502 592 aa10.83□□□□□ -0.68
FCF1-204ENST00000553673 MLLT3P42568 568 aaPredicted RBP10.82□□□□□ -0.68
FCF1-204ENST00000553673 SLC4A3P48751 1232 aa10.82□□□□□ -0.68
FCF1-204ENST00000553673 GGCXP38435 758 aa10.8□□□□□ -0.68
FCF1-204ENST00000553673 ZPR1O75312 459 aa10.78□□□□□ -0.68
FCF1-204ENST00000553673 ARHGEF1Q92888 912 aaKnown RBP10.78□□□□□ -0.68
FCF1-204ENST00000553673 PDZRN3Q9UPQ7 1066 aa10.77□□□□□ -0.69
FCF1-204ENST00000553673 PCDHB3Q9Y5E6 796 aa10.77□□□□□ -0.69
FCF1-204ENST00000553673 KCNV2Q8TDN2 545 aa10.76□□□□□ -0.69
FCF1-204ENST00000553673 TMUB1Q9BVT8 246 aa10.76□□□□□ -0.69
FCF1-204ENST00000553673 PRR14Q9BWN1 585 aa10.76□□□□□ -0.69
FCF1-204ENST00000553673 PTGDRQ13258 359 aa10.75□□□□□ -0.69
FCF1-204ENST00000553673 TSHZ2Q9NRE2 1034 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms