RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 DCAF11Q8TEB1 546 aa13.17□□□□□ -0.3
MTHFD1-203ENST00000553391 ZFYVE16Q7Z3T8 1539 aa13.17□□□□□ -0.3
MTHFD1-203ENST00000553391 IQGAP3Q86VI3 1631 aa13.17□□□□□ -0.3
MTHFD1-203ENST00000553391 CCER2I3L3R5 266 aa13.16□□□□□ -0.3
MTHFD1-203ENST00000553391 MYT1LQ9UL68 1186 aa13.16□□□□□ -0.3
MTHFD1-203ENST00000553391 KDM2AQ9Y2K7 1162 aa13.16□□□□□ -0.3
MTHFD1-203ENST00000553391 ATP7AQ04656 1500 aa13.15□□□□□ -0.3
MTHFD1-203ENST00000553391 CCDC144AA2RUR9 1427 aa13.14□□□□□ -0.31
MTHFD1-203ENST00000553391 ANP32CO43423 234 aa13.14□□□□□ -0.31
MTHFD1-203ENST00000553391 NEO1Q92859 1461 aa13.14□□□□□ -0.31
MTHFD1-203ENST00000553391 MLH3Q9UHC1 1453 aa13.14□□□□□ -0.31
MTHFD1-203ENST00000553391 PTPRTO14522 1441 aa13.13□□□□□ -0.31
MTHFD1-203ENST00000553391 INO80Q9ULG1 1556 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-203ENST00000553391 KANK1Q14678 1352 aa13.13□□□□□ -0.31
MTHFD1-203ENST00000553391 CCDC7Q96M83 1385 aa13.13□□□□□ -0.31
MTHFD1-203ENST00000553391 YTHDC1Q96MU7 727 aaKnown RBP13.13□□□□□ -0.31
MTHFD1-203ENST00000553391 ZNF518AQ6AHZ1 1483 aa13.12□□□□□ -0.31
MTHFD1-203ENST00000553391 RGL3Q3MIN7 710 aa13.12□□□□□ -0.31
MTHFD1-203ENST00000553391 ZNF326Q5BKZ1 582 aaKnown RBP13.12□□□□□ -0.31
MTHFD1-203ENST00000553391 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
MTHFD1-203ENST00000553391 VWDEQ8N2E2 1590 aa13.11□□□□□ -0.31
MTHFD1-203ENST00000553391 POGZQ7Z3K3 1410 aa13.11□□□□□ -0.31
MTHFD1-203ENST00000553391 GLI2P10070 1586 aa13.11□□□□□ -0.31
MTHFD1-203ENST00000553391 ARID4BQ4LE39 1312 aaPredicted RBP13.11□□□□□ -0.31
MTHFD1-203ENST00000553391 RAPGEF3O95398 923 aa13.1□□□□□ -0.31
MTHFD1-203ENST00000553391 CARD11Q9BXL7 1154 aa13.1□□□□□ -0.31
MTHFD1-203ENST00000553391 RALGAPBQ86X10 1494 aa13.1□□□□□ -0.31
MTHFD1-203ENST00000553391 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
MTHFD1-203ENST00000553391 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
MTHFD1-203ENST00000553391 RIMBP3Q9UFD9 1639 aa13.1□□□□□ -0.31
MTHFD1-203ENST00000553391 FAM69CQ0P6D2 419 aa13.09□□□□□ -0.31
MTHFD1-203ENST00000553391 A2MP01023 1474 aa13.09□□□□□ -0.31
MTHFD1-203ENST00000553391 KIF7Q2M1P5 1343 aa13.09□□□□□ -0.31
MTHFD1-203ENST00000553391 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-203ENST00000553391 USP47Q96K76 1375 aa13.08□□□□□ -0.31
MTHFD1-203ENST00000553391 KIDINS220Q9ULH0 1771 aa13.08□□□□□ -0.32
MTHFD1-203ENST00000553391 KDM5CP41229 1560 aa13.07□□□□□ -0.32
MTHFD1-203ENST00000553391 CFAP74Q9C0B2 1584 aa13.07□□□□□ -0.32
MTHFD1-203ENST00000553391 PRAG1Q86YV5 1406 aa13.07□□□□□ -0.32
MTHFD1-203ENST00000553391 DEPDC5O75140 1603 aa13.07□□□□□ -0.32
MTHFD1-203ENST00000553391 NBPF1Q3BBV0 1214 aa13.07□□□□□ -0.32
MTHFD1-203ENST00000553391 GPRASP1Q5JY77 1395 aa13.07□□□□□ -0.32
MTHFD1-203ENST00000553391 EIF2AK4Q9P2K8 1649 aaKnown RBP13.06□□□□□ -0.32
MTHFD1-203ENST00000553391 ST20-MTHFSA0A0A6YYL1 179 aa13.05□□□□□ -0.32
MTHFD1-203ENST00000553391 LMTK2Q8IWU2 1503 aa13.04□□□□□ -0.32
MTHFD1-203ENST00000553391 MROH1Q8NDA8 1641 aa13.03□□□□□ -0.32
MTHFD1-203ENST00000553391 CNTLNQ9NXG0 1405 aa13.03□□□□□ -0.32
MTHFD1-203ENST00000553391 MAP3K4Q9Y6R4 1608 aa13.02□□□□□ -0.32
MTHFD1-203ENST00000553391 E9PCH4 1651 aa13.02□□□□□ -0.32
MTHFD1-203ENST00000553391 GGT6Q6P531 493 aa13.02□□□□□ -0.33
MTHFD1-203ENST00000553391 ROCK2O75116 1388 aaKnown RBP13.02□□□□□ -0.33
MTHFD1-203ENST00000553391 TRPM2O94759 1503 aa13.02□□□□□ -0.33
MTHFD1-203ENST00000553391 PRDM15P57071 1507 aaPredicted RBP13.02□□□□□ -0.33
MTHFD1-203ENST00000553391 TET3O43151 1660 aa13.02□□□□□ -0.33
MTHFD1-203ENST00000553391 FRMPD1Q5SYB0 1578 aa13.01□□□□□ -0.33
MTHFD1-203ENST00000553391 PRKRIP1Q9H875 184 aaPredicted RBP13□□□□□ -0.33
MTHFD1-203ENST00000553391 WASHC2CQ9Y4E1 1318 aa12.99□□□□□ -0.33
MTHFD1-203ENST00000553391 GTF3C3Q9Y5Q9 886 aa12.99□□□□□ -0.33
MTHFD1-203ENST00000553391 NEURL4Q96JN8 1562 aa12.98□□□□□ -0.33
MTHFD1-203ENST00000553391 TESK2Q96S53 571 aa12.98□□□□□ -0.33
MTHFD1-203ENST00000553391 RNF17Q9BXT8 1623 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-203ENST00000553391 HECW2Q9P2P5 1572 aa12.98□□□□□ -0.33
MTHFD1-203ENST00000553391 BCORL1Q5H9F3 1711 aa12.97□□□□□ -0.33
MTHFD1-203ENST00000553391 YEATS2Q9ULM3 1422 aa12.96□□□□□ -0.34
MTHFD1-203ENST00000553391 TRPM1Q7Z4N2 1603 aa12.95□□□□□ -0.34
MTHFD1-203ENST00000553391 DIP2BQ9P265 1576 aa12.95□□□□□ -0.34
MTHFD1-203ENST00000553391 PPP6R1Q9UPN7 881 aa12.95□□□□□ -0.34
MTHFD1-203ENST00000553391 CLTCL1P53675 1640 aa12.95□□□□□ -0.34
MTHFD1-203ENST00000553391 ABCA6Q8N139 1617 aa12.95□□□□□ -0.34
MTHFD1-203ENST00000553391 RPGRIP1LQ68CZ1 1315 aa12.94□□□□□ -0.34
MTHFD1-203ENST00000553391 EFCAB6Q5THR3 1501 aa12.94□□□□□ -0.34
MTHFD1-203ENST00000553391 NPATQ14207 1427 aa12.94□□□□□ -0.34
MTHFD1-203ENST00000553391 ARHGAP31Q2M1Z3 1444 aa12.94□□□□□ -0.34
MTHFD1-203ENST00000553391 DIP2CQ9Y2E4 1556 aa12.94□□□□□ -0.34
MTHFD1-203ENST00000553391 SPHKAPQ2M3C7 1700 aa12.93□□□□□ -0.34
MTHFD1-203ENST00000553391 CCDC184Q52MB2 194 aa12.93□□□□□ -0.34
MTHFD1-203ENST00000553391 NOS1P29475 1434 aa12.93□□□□□ -0.34
MTHFD1-203ENST00000553391 RICTORQ6R327 1708 aa12.93□□□□□ -0.34
MTHFD1-203ENST00000553391 ADGRF5Q8IZF2 1346 aa12.92□□□□□ -0.34
MTHFD1-203ENST00000553391 LAMC1P11047 1609 aa12.92□□□□□ -0.34
MTHFD1-203ENST00000553391 POLR3GLQ9BT43 218 aa12.92□□□□□ -0.34
MTHFD1-203ENST00000553391 ABCC3O15438 1527 aa12.92□□□□□ -0.34
MTHFD1-203ENST00000553391 PPRC1Q5VV67 1664 aaKnown RBP12.91□□□□□ -0.34
MTHFD1-203ENST00000553391 ZMYM4Q5VZL5 1548 aa12.9□□□□□ -0.34
MTHFD1-203ENST00000553391 PER1O15534 1290 aaPredicted RBP12.9□□□□□ -0.34
MTHFD1-203ENST00000553391 TMF1P82094 1093 aa12.9□□□□□ -0.34
MTHFD1-203ENST00000553391 CFAP70Q5T0N1 1121 aa12.9□□□□□ -0.34
MTHFD1-203ENST00000553391 CEP152O94986 1710 aa12.89□□□□□ -0.35
MTHFD1-203ENST00000553391 POLR1AO95602 1720 aaPredicted RBP12.89□□□□□ -0.35
MTHFD1-203ENST00000553391 C14orf93Q9H972 538 aaKnown RBP12.89□□□□□ -0.35
MTHFD1-203ENST00000553391 SLC52A1Q9NWF4 448 aa12.89□□□□□ -0.35
MTHFD1-203ENST00000553391 CHGAP10645 457 aaKnown RBP12.88□□□□□ -0.35
MTHFD1-203ENST00000553391 IDI1Q13907 227 aa12.88□□□□□ -0.35
MTHFD1-203ENST00000553391 MYOM2P54296 1465 aa12.88□□□□□ -0.35
MTHFD1-203ENST00000553391 COL17A1Q9UMD9 1497 aaPredicted RBP12.88□□□□□ -0.35
MTHFD1-203ENST00000553391 MADDQ8WXG6 1647 aa12.88□□□□□ -0.35
MTHFD1-203ENST00000553391 UGGT1Q9NYU2 1555 aa12.87□□□□□ -0.35
MTHFD1-203ENST00000553391 NRXN1Q9ULB1 1477 aa12.87□□□□□ -0.35
MTHFD1-203ENST00000553391 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
MTHFD1-203ENST00000553391 SCAF11Q99590 1463 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms